prot_Ecto-sp13_S_contig11274.1135.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11274.1135.1
Unique Nameprot_Ecto-sp13_S_contig11274.1135.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length378
Homology
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BLAST of mRNA_Ecto-sp13_S_contig11274.1135.1 vs. uniprot
Match: D7FV96_ECTSI (Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV96_ECTSI)

HSP 1 Score: 511 bits (1317), Expect = 3.420e-174
Identity = 347/376 (92.29%), Postives = 353/376 (93.88%), Query Frame = 0 
Query:    1 MNRKHSRRSRRRRECDRPDQTLRWPEALPAREYDEVMGNVLAEGGDNSSVPSCSALSTALFAATLASRYNDAAAVIRLLEVYGRGIADVHDDNGRTPLHHACRGDDAGLVRLLRRAGADPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLGFTPREDLLNSEPMFARGRLPKVLRATLAYIQDAEASAPQSQSPTWTAQDGYASEDTPATAVSSRRSLIGGHCRHAFDINFNSVPQPPSEGEGPLQQIDTASVSGKETEVLHFHRHHAKGRAHATATDRLERKRDWDLRESLGSGNVLEGRNEDKSFSDGSRRGNRNRLQPVSVVLDWATDTLF 376
            MNRKHSRRSRRRRECDR D+TLRWPEALPAREYDEVMG VLA GGDNSSVPSCSALSTALFAATLASRYNDAAAVIRLLEVYGRGIADVHDDNGRTPLHHACRGDDAGLVRLLRRAGADPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLGFTPREDLLNSEP FARGRLPKVLRATLAYIQDAEASAPQ QSPTWTAQDGY SE TPAT VSSRRS IGG  RHAFDINFNS P+PPSEGEGPLQQIDTAS SGKETE LH++RHHAKGRAHATATDRLER RDWDLRE  GSGNVLEGRNEDK+FS+GSRRGNRNRL PVSV    ATD LF
Sbjct:  355 MNRKHSRRSRRRRECDRRDRTLRWPEALPAREYDEVMGAVLAGGGDNSSVPSCSALSTALFAATLASRYNDAAAVIRLLEVYGRGIADVHDDNGRTPLHHACRGDDAGLVRLLRRAGADPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLGFTPREDLLNSEPTFARGRLPKVLRATLAYIQDAEASAPQPQSPTWTAQDGYGSEGTPATVVSSRRSPIGGPSRHAFDINFNSGPEPPSEGEGPLQQIDTASASGKETEALHYYRHHAKGRAHATATDRLERNRDWDLRELQGSGNVLEGRNEDKTFSNGSRRGNRNRLVPVSV----ATDPLF 726
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BLAST of mRNA_Ecto-sp13_S_contig11274.1135.1 vs. uniprot
Match: A0A6H5L1T4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1T4_9PHAE)

HSP 1 Score: 407 bits (1046), Expect = 1.420e-137
Identity = 273/413 (66.10%), Postives = 282/413 (68.28%), Query Frame = 0 
Query:   37 MGNVLAEGGDNSSVPSCSALSTALFAATLASRYNDAAAVIRLLEVYGRGIADVHDDNGRTPLHHACRGDDAGLVRLLRRAGADPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------------------------------------------TLGFTPREDLLNSEPMFARGRLPKVLRATLAYIQDAEASAPQ---------SQSPTWTAQDGYASEDTPATAVSSRRSLIGGHCRHAFDINFNSVPQPPSEGEGPLQQIDTASVSGKETEVLHFHRHHAKGRAHATATDRLERKRDWDLRESLGSGNVLEGRNEDKSFSDGSRRGNRNRLQPVSVVLDWATDTLF 376
            MG VLAEGGDNS VPSCSALSTALFAATLASRYNDAAAVIRLLEV GRGIADV DDNGRTPLHHACRGDDAGLVRLLRRAGADPD   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                                                 TLGFTPREDLLNSE MFARGRLPKVLRATLAY+QDAEASAPQ         SQSPTWTAQDGY SEDTPATAVSSRRS IGGH RHAFD NF+S  QPPSEGE PLQQI+TAS SGKETE LH++RHHAKG+AHATATDRLER RDWDLRE  GSGNVLE RNED+S S+GSRRGN NRL PVS+VLDWATD LF
Sbjct:    1 MGAVLAEGGDNSRVPSCSALSTALFAATLASRYNDAAAVIRLLEVCGRGIADVRDDNGRTPLHHACRGDDAGLVRLLRRAGADPDAHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAEDTPLHLAVGFSSVPNDRVGTCTHPNTFHPGNAINHVASEPSLGVRCLEYVHQGRRRSASFPTNTLDLGPIQVRHGNLSCVKALVEGGAKLSRRNTLGFTPREDLLNSETMFARGRLPKVLRATLAYVQDAEASAPQPQWQASAPQSQSPTWTAQDGYGSEDTPATAVSSRRSSIGGHFRHAFDANFDSDAQPPSEGERPLQQINTASASGKETEALHYYRHHAKGKAHATATDRLERNRDWDLRELQGSGNVLERRNEDESVSNGSRRGNCNRLVPVSMVLDWATDPLF 413
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BLAST of mRNA_Ecto-sp13_S_contig11274.1135.1 vs. uniprot
Match: A0A6H5L134_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L134_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 2.910e-8
Identity = 38/60 (63.33%), Postives = 43/60 (71.67%), Query Frame = 0 
Query:    1 MNRKHSRRSRRRRECDRPDQTLRWPEALPAREYDEVMGNV----LAEGGDNSSVPSCSAL 56
            MNRKHS RSRRRRECDR D+TLRWPEALPAR YDEV  ++    L  GGD   V   +A+
Sbjct:  355 MNRKHSTRSRRRRECDRRDRTLRWPEALPARGYDEVTISLAALMLTAGGDEVHVSDTTAI 414
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11274.1135.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FV96_ECTSI3.420e-17492.29Chain A, 4ank: A Designed Ankyrin Repeat Protein W... [more]
A0A6H5L1T4_9PHAE1.420e-13766.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L134_9PHAE2.910e-863.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 159..188
e-value: 0.0034
score: 26.6
coord: 126..155
e-value: 1.9E-4
score: 30.8
coord: 93..122
e-value: 1.9E-5
score: 34.1
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 161..189
e-value: 0.0029
score: 18.0
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 93..125
score: 12.556
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 159..191
score: 11.781
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 126..158
score: 12.529
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 66..155
e-value: 1.0E-12
score: 48.4
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 55..196
score: 35.384
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 51..258
e-value: 4.4E-35
score: 123.4
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 63..197
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 126..196
coord: 60..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11274contigEcto-sp13_S_contig11274:2528..5224 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11274.1135.1mRNA_Ecto-sp13_S_contig11274.1135.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11274 2528..5224 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11274.1135.1 ID=prot_Ecto-sp13_S_contig11274.1135.1|Name=mRNA_Ecto-sp13_S_contig11274.1135.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=378bp
MNRKHSRRSRRRRECDRPDQTLRWPEALPAREYDEVMGNVLAEGGDNSSV
PSCSALSTALFAATLASRYNDAAAVIRLLEVYGRGIADVHDDNGRTPLHH
ACRGDDAGLVRLLRRAGADPDAHDCQGNSPLAVAAATGSLACLQLLIQRG
SDVNNANEADDTPLHLAVRHGNILCVNALVEGGAQLSRRNTLGFTPREDL
LNSEPMFARGRLPKVLRATLAYIQDAEASAPQSQSPTWTAQDGYASEDTP
ATAVSSRRSLIGGHCRHAFDINFNSVPQPPSEGEGPLQQIDTASVSGKET
EVLHFHRHHAKGRAHATATDRLERKRDWDLRESLGSGNVLEGRNEDKSFS
DGSRRGNRNRLQPVSVVLDWATDTLFE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf