prot_Ecto-sp13_S_contig11236.1100.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11236.1100.1
Unique Nameprot_Ecto-sp13_S_contig11236.1100.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length326
Homology
BLAST of mRNA_Ecto-sp13_S_contig11236.1100.1 vs. uniprot
Match: D8LHD4_ECTSI (Putative leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHD4_ECTSI)

HSP 1 Score: 429 bits (1102), Expect = 3.930e-142
Identity = 222/321 (69.16%), Postives = 255/321 (79.44%), Query Frame = 0
Query:    8 GDRPEVLRSHDFEFELEVPGLRRNVPALIGHCASSAEAGDGKQCLLHPVVTCLARAGESFDPPLRLRFPVGDVESMESGSDYGSDGDAEVAYRGHLESTFSALTRQDASSQWFSIDVAIVQTEEGVFVLEVMISHFCDFALKQDIINVDAGGVELVFLPRLKRKTRRSYYHFVNLGTENLVVHCWGAVGERGFLDSFRFKVAVGPTSGDAEVEARRTRADIESTGVYNVGVPGKPLGERRKGACVLVDGSESLTVAHTTQETIRP--LMGNTHELVQAWGSRCMQHKYAIIFGSLTGSMRSVPNLKVEDGVNVGELIKSMV 326
            G  P VLRS+ FEFELEVP L RNVPALIG  +SSAE  DG++CLLHPVVTCLAR+GE FDPPL LRFPVGDV SMESGSD GSD DAEV YR +LESTFS LTR+ ASS+W  +D  I QT+EG+FVLEV +SHFCDFALKQ  I VD+GGVELV LP+LK K+RRS+YHFVNLGTENLVVHCWG   +RGFL+SFR K+  G   GDAEVEA RT  D   TGVY V VPG P+ + R  AC++V+G ESLTVA+TTQ+T+R   L G+THELVQ WG+R MQHK+A+IFG L  S   VPNLKVEDGVNVGEL++S V
Sbjct:  453 GQHPAVLRSNGFEFELEVPRLGRNVPALIGLRSSSAEVVDGEKCLLHPVVTCLARSGEVFDPPLCLRFPVGDVNSMESGSDCGSD-DAEVTYRAYLESTFSTLTRKHASSEWVPVDGTIEQTDEGIFVLEVQVSHFCDFALKQ-AIKVDSGGVELVKLPQLKHKSRRSHYHFVNLGTENLVVHCWGVTRKRGFLESFRLKLGFGLNGGDAEVEATRTLVDAPGTGVYKVDVPGGPVDDPRNEACLVVNGFESLTVAYTTQKTVRAGTLFGSTHELVQVWGTRHMQHKHAMIFGILPESAL-VPNLKVEDGVNVGELVRSKV 770          
BLAST of mRNA_Ecto-sp13_S_contig11236.1100.1 vs. uniprot
Match: A0A6H5K655_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K655_9PHAE)

HSP 1 Score: 300 bits (767), Expect = 2.250e-97
Identity = 170/321 (52.96%), Postives = 206/321 (64.17%), Query Frame = 0
Query:    8 GDRPEVLRSHDFEFELEVPGLRRNVPALIGHCASSAEAGDGKQCLLHPVVTCLARAGESFDPPLRLRFPVGDVESMESGSDYGSDGDA-EVAYRGHLESTFSALTRQDASSQWFSIDVAIVQTEEGVFVLEVMISHFCDFALKQDIINVDAGGVELVFLPRLKRKTRRSYYHFVNLGTENLVVHCWGAVGERGFLDSFRFKVAVGPTSGDAEVEARRTRADIESTGVYNVGVPGKPLGERRKGACVLVDGSESLTVAHTTQETIRPLMGNTHELVQAWGSRCMQHKYAIIFGSLTG-SMRSVPNLKVEDGVNVGELIKSMV 326
            GD P+VLR+HD +F+LEVP L RNVP LIG C+SSAE  DGKQCLLHPVV CLAR GESFDP LRLR P+GD  SMESGSD  SD    +VAYR +L S F+ +TR+DASS W  ID  I Q E GVFVLEV + HFCDFAL Q I +V  G +E+V LP+LK K RRS++HFVN G ENLV HC GAV + GF D F+  +  G TS + E        D  ST               +   C +  G+ES+TVA T+Q   R      H + Q WG   MQHK+A++FG L+G     V NLKV+DG + G+L+KS V
Sbjct:   32 GDSPDVLRNHDLDFDLEVPDLGRNVPTLIGLCSSSAEVVDGKQCLLHPVVRCLARNGESFDPNLRLRLPLGDEASMESGSDGASDDXXXDVAYRAYLASKFTVVTREDASSGWVPIDGTIQQAEGGVFVLEVAVPHFCDFALSQGI-SVPRGCMEIVPLPKLKGKPRRSHFHFVNQGEENLVAHCRGAVEKTGFWDFFKINLGAGATSANVE--------DPASTN------------PNKSEVCRVFLGTESVTVAWTSQ---RYPQNARHRIPQVWGFSPMQHKHAMVFGPLSGIDTCQVSNLKVDDGESFGKLVKSKV 328          
BLAST of mRNA_Ecto-sp13_S_contig11236.1100.1 vs. uniprot
Match: A0A6H5KIZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIZ7_9PHAE)

HSP 1 Score: 277 bits (709), Expect = 1.280e-85
Identity = 161/323 (49.85%), Postives = 203/323 (62.85%), Query Frame = 0
Query:    8 GDRPEVLRSHDFEFELEV-PGLRRNVPALIGH--CASSAEAGDGKQCLLHPVVTCLARAGESFDPPLRLRFPVGDVESMESGSDYGSDGDAEVAYRGHLESTFSALTRQDASSQWFSIDVAIVQTEEGV-FVLEVMISHFCDFALKQDIINVDAGGVELVFLPRLKRKTRRSYYHFVNLGTENLVVHCWGAVGERGFLDSFRFKVAVGPTSGDAEVEARRTRADIESTGVYNVGVPGKPLGERRKGACVLVDGSESLTVAHTTQETIRPLMG-NTHELVQAWGSRCMQHKYAIIFGSLT-GSMRSVPNLKVEDGVNVGELIKS 324
            G+R EVLRS D EFELEV PGL +N PAL+G   C+ SAE  +G+Q LLH V+TCL RAGE FDPPL LRFPVGD +SMESGS  GS  DAE AYR HL+STFSA+ R DASS+W  I   IV+ + G  F LEV ISHFCDF L Q  I+V+ G  EL+ LP+    +R+++YHF NLGT+ LV H WGA  +  F++  R   AV    G    E  RT  D+  +G Y V VPG+     +   C      E  TVA TTQE I P  G   H+LVQ WGS  M   + ++ G++   +  ++ NL+V+DG +VG L+ S
Sbjct:  244 GNRAEVLRSPDSEFELEVQPGLNKNYPALVGLGLCSGSAEYVNGEQYLLHCVLTCLTRAGEKFDPPLLLRFPVGDEDSMESGSLDGSQDDAEEAYRAHLQSTFSAVKRDDASSEWVPIGGDIVRMKGGRDFFLEVKISHFCDFGLSQ-AIDVEVGYTELIELPKKMFSSRKTHYHFANLGTKPLVFHVWGAGRKEVFVNVVRANAAVDLAGGSVGAEMERTLVDVPGSGPYEVHVPGEAGSGSKPQVCRKFVDLEKPTVAWTTQERISPSSGVEGHQLVQVWGSTPMLSGHVLVVGAMAPDATPAIANLRVDDGEDVGRLVWS 565          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11236.1100.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LHD4_ECTSI3.930e-14269.16Putative leucine rich repeat protein n=1 Tax=Ectoc... [more]
A0A6H5K655_9PHAE2.250e-9752.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KIZ7_9PHAE1.280e-8549.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11236contigEcto-sp13_S_contig11236:3519..4496 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11236.1100.1mRNA_Ecto-sp13_S_contig11236.1100.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11236 824..4496 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11236.1100.1 ID=prot_Ecto-sp13_S_contig11236.1100.1|Name=mRNA_Ecto-sp13_S_contig11236.1100.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=326bp
MLWHGLSGDRPEVLRSHDFEFELEVPGLRRNVPALIGHCASSAEAGDGKQ
CLLHPVVTCLARAGESFDPPLRLRFPVGDVESMESGSDYGSDGDAEVAYR
GHLESTFSALTRQDASSQWFSIDVAIVQTEEGVFVLEVMISHFCDFALKQ
DIINVDAGGVELVFLPRLKRKTRRSYYHFVNLGTENLVVHCWGAVGERGF
LDSFRFKVAVGPTSGDAEVEARRTRADIESTGVYNVGVPGKPLGERRKGA
CVLVDGSESLTVAHTTQETIRPLMGNTHELVQAWGSRCMQHKYAIIFGSL
TGSMRSVPNLKVEDGVNVGELIKSMV
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