prot_Ecto-sp13_S_contig1120.1063.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1120.1063.1
Unique Nameprot_Ecto-sp13_S_contig1120.1063.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length588
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1120.1063.1 vs. uniprot
Match: A0A6H5K2H0_9PHAE (PARP-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2H0_9PHAE)

HSP 1 Score: 273 bits (698), Expect = 2.180e-80
Identity = 385/589 (65.37%), Postives = 387/589 (65.70%), Query Frame = 0 
Query:    1 MIPIPPRSAVRDPTPSPPIIGRQGLRRARRSMGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASPHSAAGDLLSLPGAPPDDIYHSPFAGSSPLGGLXXXXXXXXXXXXQGDAGSPLLFDDAGSGFGHRGPAD--DATGGAGAAGTAALQMPPSGIPGKAMALSSPGAGEAAAXXXXGTALGLSGFEGFPASPEPAPLTADEEAGAGGGVGELGASAGGPSSLLGHDGAEADDPVASALRGIGDDVDLIGGSDDPYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGAFTAPTAAAGGVGHEAAPAXXPASPGVGGGSXXXXSSALAPETAAGAEGGPATDAPQAGTGLRERLSTGPPDALATTPSPLPXXXXXXXXXXXXXXXXXXATAEESPSLPPGDSSSASPGPSGT 587
            MIPIPPRSAVRDPTPSPPIIGRQGLRRARRSMGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       XXXXXXXXXXXXXXXXXXX                                        GASPHSAAGDLLSLPGAPPDDIYHSPFAGSSPLG L            QG  GSPLLFDD GSGFGH+GPA   DATGG      AALQMPPSGI GK              XXXX       G EGFPASP+ A L ADEE GAGGG GELGASAGGPSSLLGHDGAEADDPVASALRGIGDDVDLIGGSDDPYG     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                                       ALAPETA  AEGGPATDAPQAGTGLRE LSTGP  ALATTPSPLPXXXXXXXXXXXXXX     TAEESPSLPPGDSSSASPGPSGT
Sbjct:  123 MIPIPPRSAVRDPTPSPPIIGRQGLRRARRSMGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEGVPKLXXXXXXXXXXXXXXXXXXXAA--------------------------------------GASPHSAAGDLLSLPGAPPDDIYHSPFAGSSPLGSLGGGAAGVAGGRGQGAVGSPLLFDDPGSGFGHKGPAGAGDATGGXXXXXAAALQMPPSGISGKXXXXXXXXXXXXXXXXXXXXXXXXXGIEGFPASPDRALLPADEETGAGGG-GELGASAGGPSSLLGHDGAEADDPVASALRGIGDDVDLIGGSDDPYGATSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------------------------------------------------------------------------ALAPETAGAAEGGPATDAPQAGTGLRESLSTGPRAALATTPSPLPXXXXXXXXXXXXXXDGE--TAEESPSLPPGDSSSASPGPSGT 583
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BLAST of mRNA_Ecto-sp13_S_contig1120.1063.1 vs. uniprot
Match: D7G9H8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9H8_ECTSI)

HSP 1 Score: 276 bits (705), Expect = 3.540e-80
Identity = 174/196 (88.78%), Postives = 178/196 (90.82%), Query Frame = 0 
Query:  147 ASPHSAAGDLLSLPGAPPDDIYHSPFAGSSPLGGLXXXXXXXXXXXXQGDAGSPLLFDDAGSGFGHRGPADDATGGAGAAGTAALQMPPSGIPGKAMALSSPGAGEAAAXXXXG--TALGLSGFEGFPASPEPAPLTADEEAGAGGG-VGELGASAGGPSSLLGHDGAEADDPVASALRGIGDDVDLIGGSDDPYG 339
            ASPHSAAGDLLSLPGAPPDDIYHSPFAGSSPLGG XXXXXXXXXXXX    GSPLLFDD GSGFGH+GPADDATGGAGAAG AALQMP SG+PGK MA+SSPGAGEA  XXXX   TALGLSG EGFPASP+PAPL ADEE GAGGG VGELGASAGGPSSLLGHDGAEADDPVASALRGIGDDVDLIGGSDDPYG
Sbjct:  262 ASPHSAAGDLLSLPGAPPDDIYHSPFAGSSPLGGXXXXXXXXXXXXXXXXXGSPLLFDDPGSGFGHKGPADDATGGAGAAGAAALQMPLSGMPGKGMAVSSPGAGEAXXXXXXXXXTALGLSGLEGFPASPDPAPLPADEEVGAGGGGVGELGASAGGPSSLLGHDGAEADDPVASALRGIGDDVDLIGGSDDPYG 457
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1120.1063.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K2H0_9PHAE2.180e-8065.37PARP-type domain-containing protein n=1 Tax=Ectoca... [more]
D7G9H8_ECTSI3.540e-8088.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1120contigEcto-sp13_S_contig1120:1113..2876 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1120.1063.1mRNA_Ecto-sp13_S_contig1120.1063.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1120 1053..3034 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1120.1063.1 ID=prot_Ecto-sp13_S_contig1120.1063.1|Name=mRNA_Ecto-sp13_S_contig1120.1063.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=588bp
MIPIPPRSAVRDPTPSPPIIGRQGLRRARRSMGASAAGGGGSSSAGAGGG
GADGDEEDDNDSGDNRGGGRGGGGGGMGSGSSSSFTSLPARTPPALLIPR
RTDSGHGGDSPVLPPPEKVPKLDDDEDGDDDDRAGGSAGAAAGAAGASPH
SAAGDLLSLPGAPPDDIYHSPFAGSSPLGGLGGAAAGVAGGGGQGDAGSP
LLFDDAGSGFGHRGPADDATGGAGAAGTAALQMPPSGIPGKAMALSSPGA
GEAAAAAAAGTALGLSGFEGFPASPEPAPLTADEEAGAGGGVGELGASAG
GPSSLLGHDGAEADDPVASALRGIGDDVDLIGGSDDPYGGASAAASHAVP
PTGGGGGGVMLGLTTTADPTPVAPAALAAQAAPAAVSTPPPTAPPASAVF
SPPPATATSTAATPPAATSASPVLFQPAAAPAASPLPTTPPSTTATPTTL
AAAAAAAAAAAVGAFTAPTAAAGGVGHEAAPAPAPASPGVGGGSSAAASS
ALAPETAAGAEGGPATDAPQAGTGLRERLSTGPPDALATTPSPLPPPPPA
AAGAAAAAAGGDGATAEESPSLPPGDSSSASPGPSGT*
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