prot_Ecto-sp13_S_contig1119.1050.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1119.1050.1
Unique Nameprot_Ecto-sp13_S_contig1119.1050.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length924
Homology
BLAST of mRNA_Ecto-sp13_S_contig1119.1050.1 vs. uniprot
Match: D7FRK7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRK7_ECTSI)

HSP 1 Score: 1353 bits (3502), Expect = 0.000e+0
Identity = 794/909 (87.35%), Postives = 814/909 (89.55%), Query Frame = 0
Query:   22 MIRTTIAGVDSLLHRSAAAATSAARQGASSRGLGDRQ-HASAAVAVCWRGGPTRRHWSSQKEAEEKDSAGDAAVNVGDYAPDATATTEEPAPPKPQRTFVVRTPDSSSSLKVTVPSTTAEAMAMNLSIRENARAKKEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQSRGRPAERRRVPSMMVVTPNARSKSIQMEVPLTTAECIELNRAVKERYPTQQQEADEDNNNNAVNPGYSRRWRNPPAPGVGGGQGAQHAYGAGLSSSPEVVKYADVEQGAREPSYDRTIGNLHKARRWDQIVRVWEEIEEREKGGVTVGLGWATYECLMDAFISHTDLGVVARCGRVFDHLVASGQGIRPAIYNLYMKGCSVARLGTRAVALIEGLDRLPGKRFKPNPQFFFNLLSATCAEGMVAESKLYYGIMRDMGFDPTNNTLQNMLDMYIREDRLVDALRVVEDTHHAGIKPRDALMNKLTYACMRHGDPELMHKTLDLLLLTGNIVNPMTVKNVLYMATRRRDDDMATKMWVAAQQWGHRFSQADYSFVVQTFFAVGKDDMALATLVQAYKEKIEVNRKTLTFCAQRLAVSNKRLDQAYYTLTLLKENGEPVPVEAVNAIIVGCAIRQAVDRCFATAEALPVVFELAPNLDTYNALMHVLGVMRAQDTDNATLGIGMSLLDQIEKEEVKPNQETFMSLIDLACMSDGLTEDFANDLVERMTSKHGLCLEQDIVDTLASAFEERGMDSLAQAWTNKMPSLDAPSDETFDASSPAAXXXXXX-------ADLTCEQGNTSGGVVRARRVAQDRGRYTGFDDGRFKAIRNSTRRGDNQGRDVGRFSYGSAGGDGGEGYSXXXXXXXXARGXXXXTGGATPDPRREERMXXXXXXXXXXXXXXXXWARRYTKSGDE 922
            MIRTTIAGVDSLLHR AAAATSAARQGASSRGLGDRQ HASAAVA+CWRGGPTRRHWSSQKEAEEKDSAGDAAV+VGDY+PDATATTEEPAPPKPQRTFVVRTPDSSSSLKVTVPSTTAEAMAMNLSIRENARAKK  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   +RGRPAERRRVPSMMVVTPNARSKSIQMEVPLTTAECI+LNRAVKERYPTQQQEADED+NN  VN GYSRRWRNPPAPGVGGGQG  HAYGAGLSS PE+V+YADVEQ AREPSYDRTIGNLHKARRWDQIVRVWEEIEEREK GVTVGLGW TYECLMDAFISH                                 GCSVARLGTRAVALIEGLDRLPGKRFKPNPQFFFNLLSATCAEGMV ESKLYYGIMRDMGF+PTNNTLQNMLDMYIREDRLVDALRVVEDTH AG++PRD LMNKLTYACMR G+PELMHKTLDLLLLTGNIVNPMTVKNVLYMATRRRDDDMATKMWVAAQQWGH FSQADYSFVVQTFFAVGKDDMALATLVQAYKEK+EVNRKTLTFCAQRLAVSNKR+DQAYYTLTLLKENGEPVPVEAVN+IIV CAIRQAVDRCFATAEALPVVFELAPNLDTYNALMHVLG MRAQDTDNATLGIGMSLLDQIEKEEVKPNQETFMSLIDLACMSDGLTEDFA+DLVERMTSKHGL LEQDIVDTLASAFEERGMDSLAQAWTNKMPSLDAPSDETFDASSPA XXXXXX       AD TCEQGN S GVVRARRVAQDRGRYTGFDDGRFKAIR+STRRG+N G  VGRFSYGSAG          XXXXXX   XXXX         REER+XXXXXXXXXXXXXXX WA+RY KSGDE
Sbjct:    1 MIRTTIAGVDSLLHRGAAAATSAARQGASSRGLGDRQQHASAAVAICWRGGPTRRHWSSQKEAEEKDSAGDAAVDVGDYSPDATATTEEPAPPKPQRTFVVRTPDSSSSLKVTVPSTTAEAMAMNLSIRENARAKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---TRGRPAERRRVPSMMVVTPNARSKSIQMEVPLTTAECIKLNRAVKERYPTQQQEADEDSNN-GVNAGYSRRWRNPPAPGVGGGQGLHHAYGAGLSSFPEIVRYADVEQSAREPSYDRTIGNLHKARRWDQIVRVWEEIEEREKRGVTVGLGWTTYECLMDAFISH---------------------------------GCSVARLGTRAVALIEGLDRLPGKRFKPNPQFFFNLLSATCAEGMVGESKLYYGIMRDMGFEPTNNTLQNMLDMYIREDRLVDALRVVEDTHQAGMRPRDPLMNKLTYACMRQGEPELMHKTLDLLLLTGNIVNPMTVKNVLYMATRRRDDDMATKMWVAAQQWGHSFSQADYSFVVQTFFAVGKDDMALATLVQAYKEKVEVNRKTLTFCAQRLAVSNKRVDQAYYTLTLLKENGEPVPVEAVNSIIVACAIRQAVDRCFATAEALPVVFELAPNLDTYNALMHVLGAMRAQDTDNATLGIGMSLLDQIEKEEVKPNQETFMSLIDLACMSDGLTEDFADDLVERMTSKHGLRLEQDIVDTLASAFEERGMDSLAQAWTNKMPSLDAPSDETFDASSPAXXXXXXXXXXXXXXADFTCEQGNGSDGVVRARRVAQDRGRYTGFDDGRFKAIRDSTRRGENPGGGVGRFSYGSAG----------XXXXXXXXXXXXXXXXXXXXSGREERVXXXXXXXXXXXXXXXGWAQRYNKSGDE 862          
BLAST of mRNA_Ecto-sp13_S_contig1119.1050.1 vs. uniprot
Match: A0A7S2V2T5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2T5_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 7.170e-18
Identity = 61/198 (30.81%), Postives = 104/198 (52.53%), Query Frame = 0
Query:  566 VVQTFFAVGKDDMALATLVQAYKEKIEVNRKTLTFCAQRLAVSNKRLDQAYYTLTLLKENGEPVPVEAVNAIIVGCAIRQAVDRCFATAEALPVVFELAPNLDTYNALMHVLGVMRAQDTDNATLGIGMSLLDQIEKEEVKPNQETFMSLIDLACM-SDGLTEDFANDLVERMTSKHGLCLEQDIVDTLASAFEERGM 762
            V  +F   GKDD A+  L +   +   +  + +   A  L+ S +RLD  YY    +++ G+ VP+ AVNA+I+GC+ + A+DR FAT + L  VF L PN+ +YN+L+     +   D D     + ++LL Q++ + + P+Q T+ +LI   C+ + G +      L E    K G+ L +D    +   F + G+
Sbjct:    7 VAYSFMLKGKDDSAVTVLGELESKGWTITSQQMKSMADLLSTSIRRLDHCYYFCRDMRDRGQVVPLSAVNAVILGCSWKGALDRAFATFDDLEKVFHLVPNVGSYNSLL-----VACCDPDRPQASVALALLRQMKDQGLLPDQHTYHNLI--KCLFAAGKSNQVGKVLAEM--EKDGVRLSKDSYIFMGREFAKLGL 195          
BLAST of mRNA_Ecto-sp13_S_contig1119.1050.1 vs. uniprot
Match: A0A2K1LA39_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1LA39_PHYPA)

HSP 1 Score: 61.6 bits (148), Expect = 5.910e-6
Identity = 38/135 (28.15%), Postives = 67/135 (49.63%), Query Frame = 0
Query:  612 LDQAYYTLTLLKENGEPVPVEAVNAIIVGCAIRQAVDRCFATAEALPVVFELAPNLDTYNALMHVLGVMRAQDTDNATLGIGMSLLDQIEKEEVKPNQETFMSLIDLACMSDGLTEDFANDLVERMTSKHGLCLE 746
            LD AY+ L  +  +G+PVP+ A+N +I+GCA     DR + T E++   F L P+  + NAL+   G        N      + L + +++  + P+Q +F  +I +  ++  + E  +  L   M + H  C E
Sbjct:  443 LDGAYFKLAEMHASGQPVPIAAINCVILGCANIWDADRAYQTFESISSTFGLRPDSHSINALLEAFG-------KNKKTAEAVKLFEYMKESGIAPDQRSFELMITVHVINRDV-ESASAILTTMMDAGHTPCRE 569          
BLAST of mRNA_Ecto-sp13_S_contig1119.1050.1 vs. uniprot
Match: A0A8H4ILH5_9PEZI (Protein-tyrosine phosphatase receptor/non-receptor type n=2 Tax=Botryosphaeria dothidea TaxID=55169 RepID=A0A8H4ILH5_9PEZI)

HSP 1 Score: 60.1 bits (144), Expect = 2.300e-5
Identity = 54/211 (25.59%), Postives = 90/211 (42.65%), Query Frame = 0
Query:  530 NVLYMATRRRDDDMATKMWVAAQQWGHRFSQADYSFVVQTFFAVGKDDMALATLVQAYKEKIEVNRKTLTFCAQRLAVSNKRLDQAYYTLTLLKENGEPVPVEAVNAIIVGCAIRQAVDRCFATAEALPVVFELAPNLDTYNALMHVLGVMRAQDTDNATLGIGMSLLDQIEKEEVKPNQETFMSLIDLACMSDGLTEDFANDLVERMTSK 740
            N L  A R  D D++T ++    +     +Q  Y  +V T+  V     AL+ L          +  ++    + +    +R  Q +  L  LKE G  VP+ AVNA+I     R  +D+     +AL  V E  P   T+N L    G  + +D       + M L  ++ +  V+P+  T+  L+ L C+++    D A    E M S+
Sbjct:  369 NALISAARHADADLSTSVFQLLGERKEVLTQQHYEMLVDTYVKVEDMRTALSVLCIMQSSGTPPDEFSMRLLFKWVRNQPERAMQLFGELRSLKEEGNAVPIVAVNALIEAAIYRNDLDQAIDMYKALHTVCESGPTTATFNILFR--GCPKRKD-------LAMFLAAEMVERNVEPDALTYDRLL-LICLNEQDNYDDAFRYYEEMRSR 569          
BLAST of mRNA_Ecto-sp13_S_contig1119.1050.1 vs. uniprot
Match: A0A8H7PHK6_MORIS (PPR_long domain-containing protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7PHK6_MORIS)

HSP 1 Score: 59.3 bits (142), Expect = 2.520e-5
Identity = 62/296 (20.95%), Postives = 116/296 (39.19%), Query Frame = 0
Query:  414 KRFKPNPQFFFNLLSATCAEGMVAESKLYYGIMRDMGFDPTNNTLQNMLDMYIREDRLVDALRVVEDTHHAGIKPRDALMNKLTYACMRHGDPELMHKTLD-------LLLLTGNIVNPM-------------------------------TVKNVLYMATRRRDDDMATKMWVAAQQWGHRFSQADYSFVVQTFFAVGKDDMALATLVQAYKEKIEVNRKTLTFCAQRLAVSNKRLDQAYYTLTLLKENGEPVPVEAVNAIIVGCAIRQAVDRCFATAEALPVVFELAPNLDTYN 671
            +R+ P+ + F  ++ A   EG + E     G+MR+ G  P   +  NML       RL  AL + E     G          +   C    + +L  K L         L +T +I  P+                               T   V+ +A +  + ++A+ M     + G+++ +  ++ +VQ F   G    A + L       I   + T +     +  + +++DQA+Y L  LK+ G+ +   A N ++  C   + + R  +T +    + ++ PN+DTYN
Sbjct:   60 RRYTPSVEIFNVVIKALANEGSITEQVKILGVMREKGVKPDAISYYNMLRNLHDFSRLEQALDIHETALSDGXXXXXXXXXXIIRLCGEVDELDLGWKLLQDADKANLPLNITPSIGLPLLRSAAKLEKVDIVQGIWELIQRKSLSLPDDGTAIMVMNLAGKLGNIELASSMIDCLGKQGYQYQEHHFAPLVQAFVGQGDLKGAFSVLEIMRSCAISATKHTASAIFDSIEGNLEKIDQAFYILEQLKQEGKEIDTIAFNVVLRACVRAKDLHRSISTYQEAAKL-DVQPNIDTYN 354          
BLAST of mRNA_Ecto-sp13_S_contig1119.1050.1 vs. uniprot
Match: A0A1J9R2D5_9PEZI (Pentatricopeptide repeat protein n=1 Tax=Diplodia corticola TaxID=236234 RepID=A0A1J9R2D5_9PEZI)

HSP 1 Score: 57.8 bits (138), Expect = 8.770e-5
Identity = 56/214 (26.17%), Postives = 91/214 (42.52%), Query Frame = 0
Query:  527 TVKNVLYMATRRRDDDMATKMWVAAQQWGHRFSQADYSFVVQTFFAVGKDDMALATLVQAYKEKIEVNRKTLTFCAQRLAVSNKRLDQAYYTLTLLKENGEPVPVEAVNAIIVGCAIRQAVDRCFATAEALPVVFELAPNLDTYNALMHVLGVMRAQDTDNATLGIGMSLLDQIEKEEVKPNQETFMSLIDLACMSDGLTEDFANDLVERMTSK 740
            T  N+L +A R  D D+AT ++    Q    F+Q  Y  +V T+  V     AL+ L          +  +     +      +R  Q +  L  LK+ G   P+ AVNA+I     R  +D      +AL  V E  P+  T+N L    G  + +D       + M L  ++ + +V+P+  T+  L+ L C+ +    D A    E M S+
Sbjct:  316 TCFNILGVAARVGDGDLATDVFRVLSQRKEVFTQQHYEMLVDTYIQVDDMRTALSVLCIMQASGTPPDDYSTRKLVRWTCAHAERPLQLFEQLLKLKDEGYKAPLAAVNALIEAAVSRDDLDTAIDIYKALHTVCEDGPSTATFNILFR--GCPKRKD-------LAMFLAAEMVERKVEPDALTYDRLL-LICLMEQDKYDDAFRYYEEMRSR 519          
BLAST of mRNA_Ecto-sp13_S_contig1119.1050.1 vs. uniprot
Match: A0A1S8B461_9PEZI (Pentatricopeptide repeat-containing protein, mitochondrial n=1 Tax=Diplodia seriata TaxID=420778 RepID=A0A1S8B461_9PEZI)

HSP 1 Score: 57.4 bits (137), Expect = 9.490e-5
Identity = 56/211 (26.54%), Postives = 88/211 (41.71%), Query Frame = 0
Query:  530 NVLYMATRRRDDDMATKMWVAAQQWGHRFSQADYSFVVQTFFAVGKDDMALATLVQAYKEKIEVNRKTLTFCAQRLAVSNKRLDQAYYTLTLLKENGEPVPVEAVNAIIVGCAIRQAVDRCFATAEALPVVFELAPNLDTYNALMHVLGVMRAQDTDNATLGIGMSLLDQIEKEEVKPNQETFMSLIDLACMSDGLTEDFANDLVERMTSK 740
            NVL +A R  D D+AT ++    +    F+Q  Y  +V T+   G    AL+ L          +  +     Q       R  Q +  L  LK+ G   P+ AVNA+I     R  +D      +AL  V E  P+  T+N L    G    +D       + M L  ++ + +V+P+  T+  L+ L C+ +    D A    E M S+
Sbjct:  191 NVLGVAARAGDADLATDVFRLLSERKEAFTQQHYELLVDTYIQAGDLRTALSVLCIMQGSGTPPDEYSTRKLVQWTRAHADRAVQLFEQLRKLKDEGFKAPLAAVNALIEAAIGRDDLDTAIDIYKALHTVCEDNPSTATFNILFR--GCSTRKD-------LAMFLAAEMVERKVEPDALTYDRLL-LICLMEQDNYDDAFRYYEEMRSR 391          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1119.1050.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FRK7_ECTSI0.000e+087.35Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2V2T5_9STRA7.170e-1830.81Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A2K1LA39_PHYPA5.910e-628.15Uncharacterized protein n=2 Tax=Physcomitrium pate... [more]
A0A8H4ILH5_9PEZI2.300e-525.59Protein-tyrosine phosphatase receptor/non-receptor... [more]
A0A8H7PHK6_MORIS2.520e-520.95PPR_long domain-containing protein n=1 Tax=Mortier... [more]
A0A1J9R2D5_9PEZI8.770e-526.17Pentatricopeptide repeat protein n=1 Tax=Diplodia ... [more]
A0A1S8B461_9PEZI9.490e-526.54Pentatricopeptide repeat-containing protein, mitoc... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 576..795
e-value: 2.9E-14
score: 55.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 299..439
e-value: 3.6E-6
score: 28.4
coord: 440..541
e-value: 1.9E-8
score: 35.8
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 562..725
coord: 312..479

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1119contigEcto-sp13_S_contig1119:439..13844 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1119.1050.1mRNA_Ecto-sp13_S_contig1119.1050.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1119 439..13844 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1119.1050.1 ID=prot_Ecto-sp13_S_contig1119.1050.1|Name=mRNA_Ecto-sp13_S_contig1119.1050.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=924bp
VKHTAVHATFQTKYGRPHPAAMIRTTIAGVDSLLHRSAAAATSAARQGAS
SRGLGDRQHASAAVAVCWRGGPTRRHWSSQKEAEEKDSAGDAAVNVGDYA
PDATATTEEPAPPKPQRTFVVRTPDSSSSLKVTVPSTTAEAMAMNLSIRE
NARAKKEAAARRHAANTAARTSSKQPGGEAAAAAAAMAAAPQSRGRPAER
RRVPSMMVVTPNARSKSIQMEVPLTTAECIELNRAVKERYPTQQQEADED
NNNNAVNPGYSRRWRNPPAPGVGGGQGAQHAYGAGLSSSPEVVKYADVEQ
GAREPSYDRTIGNLHKARRWDQIVRVWEEIEEREKGGVTVGLGWATYECL
MDAFISHTDLGVVARCGRVFDHLVASGQGIRPAIYNLYMKGCSVARLGTR
AVALIEGLDRLPGKRFKPNPQFFFNLLSATCAEGMVAESKLYYGIMRDMG
FDPTNNTLQNMLDMYIREDRLVDALRVVEDTHHAGIKPRDALMNKLTYAC
MRHGDPELMHKTLDLLLLTGNIVNPMTVKNVLYMATRRRDDDMATKMWVA
AQQWGHRFSQADYSFVVQTFFAVGKDDMALATLVQAYKEKIEVNRKTLTF
CAQRLAVSNKRLDQAYYTLTLLKENGEPVPVEAVNAIIVGCAIRQAVDRC
FATAEALPVVFELAPNLDTYNALMHVLGVMRAQDTDNATLGIGMSLLDQI
EKEEVKPNQETFMSLIDLACMSDGLTEDFANDLVERMTSKHGLCLEQDIV
DTLASAFEERGMDSLAQAWTNKMPSLDAPSDETFDASSPAAAAAAAAADL
TCEQGNTSGGVVRARRVAQDRGRYTGFDDGRFKAIRNSTRRGDNQGRDVG
RFSYGSAGGDGGEGYSGGGGAGGLARGGGRGTGGATPDPRREERMGGGRG
SPPSEGGGGGGWARRYTKSGDEY*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf