prot_Ecto-sp13_S_contig11185.1046.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11185.1046.1
Unique Nameprot_Ecto-sp13_S_contig11185.1046.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length115
Homology
BLAST of mRNA_Ecto-sp13_S_contig11185.1046.1 vs. uniprot
Match: D8LMY2_ECTSI (CSN8_PSD8_EIF3K domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMY2_ECTSI)

HSP 1 Score: 206 bits (523), Expect = 1.770e-65
Identity = 103/114 (90.35%), Postives = 105/114 (92.11%), Query Frame = 0
Query:    1 MSLAHAGLRDREWSAPLAPYVALVETRVRERQLAIIPKAFTVLPLESVAGMLACSVEDAEKACLKEGWEVDTTAEKTVKPSTKAFPDDTIPAATPDCLQKMANHIAFLERQSQG 114
            MS A A LRDREWSAPLAPYVAL+ETRVRERQLAIIPKAFTVLPLESVAGMLACSVEDAEKACLKEGWEVD TAEK VKPS +  PDDTIPAATPD LQKMANHIAFLERQSQG
Sbjct:  100 MSFAQAALRDREWSAPLAPYVALIETRVRERQLAIIPKAFTVLPLESVAGMLACSVEDAEKACLKEGWEVDATAEKAVKPSVRLIPDDTIPAATPDYLQKMANHIAFLERQSQG 213          
BLAST of mRNA_Ecto-sp13_S_contig11185.1046.1 vs. uniprot
Match: A0A146M5C6_LYGHE (COP9 signalosome complex subunit 8 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A146M5C6_LYGHE)

HSP 1 Score: 53.5 bits (127), Expect = 2.510e-6
Identity = 30/105 (28.57%), Postives = 53/105 (50.48%), Query Frame = 0
Query:    5 HAGLRDREWSAPLAPYVALVETRVRERQLAIIPKAFTVLPLESVAGMLACSVEDAEKACLKEGWEVDTTAEKTVKPSTKAFPDDTIPAATPDCLQKMANHIAFLE 109
            +  L   +WS  +AP +A +  +VRER L ++ +A+T + L++++ +L  S  +A    L   W V+      +KP     P      +T   LQ + N ++FLE
Sbjct:   74 YTALNSTQWSDDVAPIMAALVDKVRERCLGLVSQAYTSVTLDTLSKLLGVSPSEAGTIALSNSWTVEDKLAYPIKPQ----PQQKQLTSTEQQLQILTNFVSFLE 174          
BLAST of mRNA_Ecto-sp13_S_contig11185.1046.1 vs. uniprot
Match: A0A0A9W9W4_LYGHE (COP9 signalosome complex subunit 8 n=2 Tax=Mirini TaxID=236659 RepID=A0A0A9W9W4_LYGHE)

HSP 1 Score: 53.5 bits (127), Expect = 2.820e-6
Identity = 30/105 (28.57%), Postives = 53/105 (50.48%), Query Frame = 0
Query:    5 HAGLRDREWSAPLAPYVALVETRVRERQLAIIPKAFTVLPLESVAGMLACSVEDAEKACLKEGWEVDTTAEKTVKPSTKAFPDDTIPAATPDCLQKMANHIAFLE 109
            +  L   +WS  +AP +A +  +VRER L ++ +A+T + L++++ +L  S  +A    L   W V+      +KP     P      +T   LQ + N ++FLE
Sbjct:   83 YTALNSTQWSDDVAPIMAALVDKVRERCLGLVSQAYTSVTLDTLSKLLGVSPSEAGTIALSNSWTVEDKLAYPIKPQ----PQQKQLTSTEQQLQILTNFVSFLE 183          
BLAST of mRNA_Ecto-sp13_S_contig11185.1046.1 vs. uniprot
Match: A0A507BUJ9_9FUNG (CSN8_PSD8_EIF3K domain-containing protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507BUJ9_9FUNG)

HSP 1 Score: 53.5 bits (127), Expect = 4.240e-6
Identity = 34/106 (32.08%), Postives = 54/106 (50.94%), Query Frame = 0
Query:   13 WSAPLAPYVALVETRVRERQLAIIPKAFTVLPLESVAGMLACSVEDAEKACLKEGWEVDTTAEKTVKPSTKAFPDDTIPAAT-----PDCLQKMA---NHIAFLER 110
            +S  L P +  ++ R+RER   +I KA+T +PL ++A  L  S++D    C + GW +D T     +P     P     AAT      D L++MA   +++  LER
Sbjct:  121 YSTDLRPLIEELKKRIRERVFVLITKAYTDVPLSTIANSLGLSLDDTRAVCTQAGWMIDATTGIATRPPA---PPTLAAAATGGIVGADGLKRMATISDYVVNLER 223          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11185.1046.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LMY2_ECTSI1.770e-6590.35CSN8_PSD8_EIF3K domain-containing protein n=2 Tax=... [more]
A0A146M5C6_LYGHE2.510e-628.57COP9 signalosome complex subunit 8 (Fragment) n=1 ... [more]
A0A0A9W9W4_LYGHE2.820e-628.57COP9 signalosome complex subunit 8 n=2 Tax=Mirini ... [more]
A0A507BUJ9_9FUNG4.240e-632.08CSN8_PSD8_EIF3K domain-containing protein n=1 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033464CSN8/PSMD8/EIF3KPFAMPF10075CSN8_PSD8_EIF3Kcoord: 8..76
e-value: 4.8E-10
score: 39.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11185contigEcto-sp13_S_contig11185:3412..4969 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11185.1046.1mRNA_Ecto-sp13_S_contig11185.1046.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11185 2402..4974 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11185.1046.1 ID=prot_Ecto-sp13_S_contig11185.1046.1|Name=mRNA_Ecto-sp13_S_contig11185.1046.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=115bp
MSLAHAGLRDREWSAPLAPYVALVETRVRERQLAIIPKAFTVLPLESVAG
MLACSVEDAEKACLKEGWEVDTTAEKTVKPSTKAFPDDTIPAATPDCLQK
MANHIAFLERQSQG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033464CSN8_PSD8_EIF3K