prot_Ecto-sp13_S_contig11182.1042.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11182.1042.1
Unique Nameprot_Ecto-sp13_S_contig11182.1042.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length120
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig11182.1042.1 vs. uniprot
Match: D7FKN7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKN7_ECTSI)

HSP 1 Score: 182 bits (462), Expect = 1.850e-57
Identity = 103/116 (88.79%), Postives = 104/116 (89.66%), Query Frame = 0 
Query:    1 MSLSPSSIRAVLKSAGQRAGDVSELERPARSEEIESAVATADGGEGPVSVGLPTGSSRENRSPATRGRSRTPRRGLSVGRGLIPNFL--PREPKPQPHGRSSGSAYGHRQGQWYGC 114
            MSLSPSSIRAVLKSAGQRAG V ELERPAR EEIESAVATADGGEG VSVGLP GSSRENRSPATRGRSRTPRRGLSVGR L+PNFL   REPKPQPHGRSSGS  GHRQGQ YGC
Sbjct:    1 MSLSPSSIRAVLKSAGQRAGGVPELERPARPEEIESAVATADGGEGLVSVGLPAGSSRENRSPATRGRSRTPRRGLSVGRDLMPNFLRAAREPKPQPHGRSSGSVGGHRQGQRYGC 116
[Close]
BLAST of mRNA_Ecto-sp13_S_contig11182.1042.1 vs. uniprot
Match: A0A6H5JG62_9PHAE (IPPc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG62_9PHAE)

HSP 1 Score: 142 bits (357), Expect = 8.890e-37
Identity = 84/91 (92.31%), Postives = 84/91 (92.31%), Query Frame = 0 
Query:    1 MSLSPSSIRAVLKSAGQRAGDVSELERPARSEEIESAVATADGGEGPVSVGLPTGSSRENRSPATRGRSRTPRRGLSVGRGLIPNFLPREP 91
            MSLSPSSIRAV KSAGQRAG VSELERPARSEEIESAVATADG EG VSVGLPTGSSRENRSPATRGRSRT RRGLSVGRGLI NFL REP
Sbjct:    1 MSLSPSSIRAVFKSAGQRAGGVSELERPARSEEIESAVATADGEEGLVSVGLPTGSSRENRSPATRGRSRTSRRGLSVGRGLISNFL-REP 90
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11182.1042.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FKN7_ECTSI1.850e-5788.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JG62_9PHAE8.890e-3792.31IPPc domain-containing protein n=1 Tax=Ectocarpus ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11182contigEcto-sp13_S_contig11182:282..1057 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11182.1042.1mRNA_Ecto-sp13_S_contig11182.1042.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11182 282..1057 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11182.1042.1 ID=prot_Ecto-sp13_S_contig11182.1042.1|Name=mRNA_Ecto-sp13_S_contig11182.1042.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=120bp
MSLSPSSIRAVLKSAGQRAGDVSELERPARSEEIESAVATADGGEGPVSV
GLPTGSSRENRSPATRGRSRTPRRGLSVGRGLIPNFLPREPKPQPHGRSS
GSAYGHRQGQWYGCEGNRR*
back to top