prot_Ecto-sp13_S_contig11178.1034.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11178.1034.1
Unique Nameprot_Ecto-sp13_S_contig11178.1034.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length90
Homology
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BLAST of mRNA_Ecto-sp13_S_contig11178.1034.1 vs. uniprot
Match: D8LG60_ECTSI (Histone deactylase of possible bacterial origin with ankyrin repeats at the N-terminus n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG60_ECTSI)

HSP 1 Score: 141 bits (355), Expect = 4.840e-37
Identity = 74/77 (96.10%), Postives = 74/77 (96.10%), Query Frame = 0 
Query:   14 ADGERLPPVSREFAEQMSPSALQAIKQISKLRDAQYLSGRGRDKPSASDEEQEPVLPMGPTPELAPAAGDYESSDVG 90
            ADGERLPPVSREFAEQMSPSALQAIKQISKLRDAQYLSGRGRDKPS SDEEQEPVLPMGPTPELAPAAG YESSD G
Sbjct:  418 ADGERLPPVSREFAEQMSPSALQAIKQISKLRDAQYLSGRGRDKPSTSDEEQEPVLPMGPTPELAPAAGGYESSDGG 494
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11178.1034.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LG60_ECTSI4.840e-3796.10Histone deactylase of possible bacterial origin wi... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11178contigEcto-sp13_S_contig11178:529..1918 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11178.1034.1mRNA_Ecto-sp13_S_contig11178.1034.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11178 528..1918 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11178.1034.1 ID=prot_Ecto-sp13_S_contig11178.1034.1|Name=mRNA_Ecto-sp13_S_contig11178.1034.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=90bp
ASGAAGASPAAAPADGERLPPVSREFAEQMSPSALQAIKQISKLRDAQYL
SGRGRDKPSASDEEQEPVLPMGPTPELAPAAGDYESSDVG
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