prot_Ecto-sp13_S_contig11173.1032.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11173.1032.1
Unique Nameprot_Ecto-sp13_S_contig11173.1032.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length209
Homology
BLAST of mRNA_Ecto-sp13_S_contig11173.1032.1 vs. uniprot
Match: D8LN05_ECTSI (PHD-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN05_ECTSI)

HSP 1 Score: 375 bits (963), Expect = 4.930e-123
Identity = 198/201 (98.51%), Postives = 199/201 (99.00%), Query Frame = 0
Query:    1 EQLVNELGGAGAVAEMTGRKGRMVKKPDGEVVYEKRNANGISMTMQNVFEKECFMSGQKLVAIISEAASAGISLQADRRAKNQKPRVHITMELPWSADKAVQQLGRSHRSNQSSAPSYKLLLSSVGGERRFASAVSSRLESLGALTQGDRRSAGAHGLGLSAFNMDTKYGRLALEKVLLAAIRRIQPEVVFPALPEGEATK 201
            +QLVNELGGAG VAEMTGRKGRMVKKPDGEVVYEKRNANGISMTMQNVFEKECFMSGQKLVAIISEAASAGISLQADRRAKNQKPRVHITMELPWSADKAVQQLGRSHRSNQSSAPSYKLLLSSVGGERRFASAVSSRLESLGALTQGDRRSAGAHGLGLSAFNMDTKYGRLALEKVLLAAIRRIQPEVVFPALPEGE TK
Sbjct:  120 DQLVNELGGAGVVAEMTGRKGRMVKKPDGEVVYEKRNANGISMTMQNVFEKECFMSGQKLVAIISEAASAGISLQADRRAKNQKPRVHITMELPWSADKAVQQLGRSHRSNQSSAPSYKLLLSSVGGERRFASAVSSRLESLGALTQGDRRSAGAHGLGLSAFNMDTKYGRLALEKVLLAAIRRIQPEVVFPALPEGEDTK 320          
BLAST of mRNA_Ecto-sp13_S_contig11173.1032.1 vs. uniprot
Match: A0A6H5KWU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWU5_9PHAE)

HSP 1 Score: 273 bits (697), Expect = 4.770e-81
Identity = 146/147 (99.32%), Postives = 146/147 (99.32%), Query Frame = 0
Query:   55 MSGQKLVAIISEAASAGISLQADRRAKNQKPRVHITMELPWSADKAVQQLGRSHRSNQSSAPSYKLLLSSVGGERRFASAVSSRLESLGALTQGDRRSAGAHGLGLSAFNMDTKYGRLALEKVLLAAIRRIQPEVVFPALPEGEATK 201
            MSGQKLVAIISEAASAGISLQADRRAKNQKPRVHITMELPWSADKAVQQLGRSHRSNQSSAPSYKLLLSSVGGERRFASAVSSRLESLGALTQGDRRSAGAHGLGLSAFNMDTKYGRLALEKVLLAAIRRIQPEVVFPALPEGE TK
Sbjct:    1 MSGQKLVAIISEAASAGISLQADRRAKNQKPRVHITMELPWSADKAVQQLGRSHRSNQSSAPSYKLLLSSVGGERRFASAVSSRLESLGALTQGDRRSAGAHGLGLSAFNMDTKYGRLALEKVLLAAIRRIQPEVVFPALPEGEDTK 147          
BLAST of mRNA_Ecto-sp13_S_contig11173.1032.1 vs. uniprot
Match: A0A7S3JZA5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JZA5_9STRA)

HSP 1 Score: 243 bits (620), Expect = 1.130e-70
Identity = 138/211 (65.40%), Postives = 160/211 (75.83%), Query Frame = 0
Query:    1 EQLVNELGGAGAVAEMTGRKGRMVKKPD-GEVVYEKRNA-NGISMTMQNVFEKECFMSGQKLVAIISEAASAGISLQADRRAKNQKPRVHITMELPWSADKAVQQLGRSHRSNQSSAPSYKLLLSSVGGERRFASAVSSRLESLGALTQGDRRSA-GAHGLGLSAFNMDTKYGRLALEKVLLAAIRRIQPEVVFPALPEGEATKVRNTVQR 208
            + L++ LGG+  VAEMTGRK RMV+ P  G+V  E RN  NG+S+ MQN+ EK CF +G+K VAIISEAASAGISLQADRR  NQK RVHIT+ELPWSADKA+QQLGRSHRSNQSSAP YK L+SSVGGERRFASAV+ RLESLGALTQGDRR+  GA GLGL+AFN DTK+GR AL K      +   P     ALP  E T +   V++
Sbjct:  817 DTLIDALGGSENVAEMTGRKNRMVRDPKTGKVRQEVRNEKNGVSLEMQNMHEKRCFQNGEKCVAIISEAASAGISLQADRRVPNQKRRVHITLELPWSADKAIQQLGRSHRSNQSSAPEYKFLISSVGGERRFASAVARRLESLGALTQGDRRATVGAKGLGLTAFNFDTKWGRQALSKYFGIINKVNNPPYTLSALPISERTALVEKVEQ 1027          
BLAST of mRNA_Ecto-sp13_S_contig11173.1032.1 vs. uniprot
Match: A0A8J2S7U1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S7U1_9STRA)

HSP 1 Score: 239 bits (609), Expect = 1.200e-69
Identity = 128/176 (72.73%), Postives = 150/176 (85.23%), Query Frame = 0
Query:    1 EQLVNELGGAGAVAEMTGRKGRMVKKP-DGEVVYEKRNANGISMTMQNVFEKECFMSGQKLVAIISEAASAGISLQADRRAKNQKPRVHITMELPWSADKAVQQLGRSHRSNQSSAPSYKLLLSSVGGERRFASAVSSRLESLGALTQGDRRSA-GAHGLGLSAFNMDTKYGRLAL 174
            + L+ ELGG+  VAEMTGRKGRMV+    G+VVYE RN+NG+S+ MQN+ EK+ F  G+K VAIISEAASAGISLQADRR  NQ+ RVHIT+ELPWSADKA+QQLGR+HRSNQSSAP YK L+SSVGGE+RFASAV+ RLESLGALTQGDRR+  GA GLGL+AFN DTK+G+ AL
Sbjct:  720 DTLIAELGGSDCVAEMTGRKGRMVRDATSGKVVYEARNSNGVSLEMQNMHEKQAFNGGEKHVAIISEAASAGISLQADRRVANQRRRVHITLELPWSADKAIQQLGRTHRSNQSSAPEYKFLISSVGGEKRFASAVARRLESLGALTQGDRRATVGAKGLGLTAFNFDTKWGKNAL 895          
BLAST of mRNA_Ecto-sp13_S_contig11173.1032.1 vs. uniprot
Match: A0A7S4A0M8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A0M8_9STRA)

HSP 1 Score: 239 bits (609), Expect = 3.230e-69
Identity = 128/176 (72.73%), Postives = 150/176 (85.23%), Query Frame = 0
Query:    1 EQLVNELGGAGAVAEMTGRKGRMVKKP-DGEVVYEKRNANGISMTMQNVFEKECFMSGQKLVAIISEAASAGISLQADRRAKNQKPRVHITMELPWSADKAVQQLGRSHRSNQSSAPSYKLLLSSVGGERRFASAVSSRLESLGALTQGDRRSA-GAHGLGLSAFNMDTKYGRLAL 174
            + L+ ELGG+  VAEMTGRKGRMV+    G+VVYE RN+NG+S+ MQN+ EK+ F  G+K VAIISEAASAGISLQADRR  NQ+ RVHIT+ELPWSADKA+QQLGR+HRSNQSSAP YK L+SSVGGE+RFASAV+ RLESLGALTQGDRR+  GA GLGL+AFN DTK+G+ AL
Sbjct:  720 DTLIAELGGSDCVAEMTGRKGRMVRDATSGKVVYEARNSNGVSLEMQNMHEKQAFNGGEKHVAIISEAASAGISLQADRRVANQRRRVHITLELPWSADKAIQQLGRTHRSNQSSAPEYKFLISSVGGEKRFASAVARRLESLGALTQGDRRATVGAKGLGLTAFNFDTKWGKNAL 895          
BLAST of mRNA_Ecto-sp13_S_contig11173.1032.1 vs. uniprot
Match: UPI000BA8308B (protein strawberry notch homolog 1-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI000BA8308B)

HSP 1 Score: 218 bits (556), Expect = 1.340e-64
Identity = 119/198 (60.10%), Postives = 147/198 (74.24%), Query Frame = 0
Query:    1 EQLVNELGGAGAVAEMTGRKGRMVKKPDGEVVYEKRNANGISMTMQNVFEKECFMSGQKLVAIISEAASAGISLQADRRAKNQKPRVHITMELPWSADKAVQQLGRSHRSNQSSAPSYKLLLSSVGGERRFASAVSSRLESLGALTQGDRRSAGAHGLGLSAFNMDTKYGRLALEKVLLAAIRRIQPEVVFPALPEGE 198
            +QL++ELGG   VAEMTGRKGR+V   DG + YE R+   + +   N+ EK+ FM G+K +AIISEAAS+GISLQADRRAKNQ  RVHIT+ELPWSAD+A+QQ GRSHRSNQ SAP Y  L+S + GERRFAS V+ RLESLGALT GDRR+  +    LS FN+DTKYGR ALE ++ A ++   P+V  P   EG+
Sbjct:   79 DQLIDELGGPENVAEMTGRKGRVVSNDDGSIQYESRSEIDVPVETLNITEKQRFMDGEKHIAIISEAASSGISLQADRRAKNQARRVHITLELPWSADRAIQQFGRSHRSNQVSAPEYLFLISDLAGERRFASIVAKRLESLGALTHGDRRATESR--DLSKFNIDTKYGRAALESMMRAIMQMEIPQVPPPEDYEGD 274          
BLAST of mRNA_Ecto-sp13_S_contig11173.1032.1 vs. uniprot
Match: A0A2P2LR77_RHIMU (Helicase_C_4 domain-containing protein n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2LR77_RHIMU)

HSP 1 Score: 216 bits (551), Expect = 1.520e-64
Identity = 117/206 (56.80%), Postives = 153/206 (74.27%), Query Frame = 0
Query:    3 LVNELGGAGAVAEMTGRKGRMVKKPDGE-VVYEKRNANGISMTMQNVFEKECFMSGQKLVAIISEAASAGISLQADRRAKNQKPRVHITMELPWSADKAVQQLGRSHRSNQSSAPSYKLLLSSVGGERRFASAVSSRLESLGALTQGDRRSAGAHGLGLSAFNMDTKYGRLALEKVLLAAIRRIQPEVVFPALPEGEATKVRNTVQ 207
            ++ +LGG   VAEMTGR+G +V+   G+ V Y+ RN   ++M M N+ EK+ FM G+KLVAIISEA SAG+SLQADRRAKNQK RVH+T+ELPWSAD+A+QQ GR+HRSNQ+SAP Y+LL +++GGERRFAS V+ RLESLGALTQGDRR+    G  LSA+N D+ YG+    K L+   R I  +   P +P G +++  +TVQ
Sbjct:    7 MLIQLGGPDKVAEMTGRRGMLVRASSGKGVTYQARNTKDVTMEMVNMHEKQLFMEGKKLVAIISEAGSAGVSLQADRRAKNQKRRVHLTLELPWSADRAIQQFGRTHRSNQASAPEYRLLFTNLGGERRFASIVAKRLESLGALTQGDRRA----GPSLSAYNYDSAYGK----KALMVMYRGIMEQDTLPVVPPGCSSEKPDTVQ 204          
BLAST of mRNA_Ecto-sp13_S_contig11173.1032.1 vs. uniprot
Match: A0A2G3BC98_CAPCH (Protein strawberry notch-like protein 1 n=1 Tax=Capsicum chinense TaxID=80379 RepID=A0A2G3BC98_CAPCH)

HSP 1 Score: 212 bits (540), Expect = 1.620e-64
Identity = 116/203 (57.14%), Postives = 148/203 (72.91%), Query Frame = 0
Query:    6 ELGGAGAVAEMTGRKGRMVKKPDGE-VVYEKRNANGISMTMQNVFEKECFMSGQKLVAIISEAASAGISLQADRRAKNQKPRVHITMELPWSADKAVQQLGRSHRSNQSSAPSYKLLLSSVGGERRFASAVSSRLESLGALTQGDRRSAGAHGLGLSAFNMDTKYGRLALEKVLLAAIRRIQPEVVFPALPEGEATKVRNTVQ 207
            ELGG   VAE+TGRKG +V+   G+ V Y+ RN   +SM M N+ EK+ FM G+KLVAIISEA SAG+SLQADRRA NQ+ RVH+T+ELPWSAD+A+QQ GR+HRSNQ+SAP YKLL +++GGERRFAS V+ RLESLGALTQGDRR+    G  LSA+N D+ YG+ AL    +   R I  +   P +P G +  + + +Q
Sbjct:   45 ELGGPENVAEITGRKGMLVRAASGKGVTYQARNTKDVSMEMVNIHEKQLFMEGKKLVAIISEAGSAGVSLQADRRALNQRRRVHVTLELPWSADRAIQQFGRTHRSNQASAPEYKLLFTNLGGERRFASVVAKRLESLGALTQGDRRA----GPSLSAYNYDSSYGKRAL----MMLYRGIMEQDPLPLVPPGCSADIPDAIQ 239          
BLAST of mRNA_Ecto-sp13_S_contig11173.1032.1 vs. uniprot
Match: UPI00052813F4 (protein strawberry notch homolog 2-like n=1 Tax=Eurypyga helias TaxID=54383 RepID=UPI00052813F4)

HSP 1 Score: 214 bits (544), Expect = 1.710e-64
Identity = 115/197 (58.38%), Postives = 144/197 (73.10%), Query Frame = 0
Query:    1 EQLVNELGGAGAVAEMTGRKGRMVKKPDGEVVYEKRNANGISMTMQNVFEKECFMSGQKLVAIISEAASAGISLQADRRAKNQKPRVHITMELPWSADKAVQQLGRSHRSNQSSAPSYKLLLSSVGGERRFASAVSSRLESLGALTQGDRRSAGAHGLGLSAFNMDTKYGRLALEKVLLAAIRRIQPEVVFPALPEG 197
            ++L+N  GG   VAEMTGRKGR+V +PDG VV+E R   G+S+   N+ EKE FM G+KLVAIISEA+S+GISLQADRR KNQK RVH+T+ELPWSAD+A+QQ GR+HRSNQ SAP Y  L+S + GERRFAS V+ RLESLGALT GDRR+  +    LS +N + KYG  AL++VL   +   +  V  P   +G
Sbjct:  111 DELINHFGGPEHVAEMTGRKGRVVCRPDGSVVFESRAEQGLSIDHVNLKEKERFMKGEKLVAIISEASSSGISLQADRRVKNQKRRVHMTLELPWSADRAIQQFGRTHRSNQVSAPEYVFLISELAGERRFASIVAKRLESLGALTHGDRRATESR--DLSKYNFENKYGAKALDRVLSTILSYTENRVPVPKSYDG 305          
BLAST of mRNA_Ecto-sp13_S_contig11173.1032.1 vs. uniprot
Match: D8QWV6_SELML (Helicase_C_4 domain-containing protein (Fragment) n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QWV6_SELML)

HSP 1 Score: 213 bits (542), Expect = 1.980e-64
Identity = 112/205 (54.63%), Postives = 152/205 (74.15%), Query Frame = 0
Query:    1 EQLVNELGGAGAVAEMTGRKGRMVKKPDGE-VVYEKRNANGISMTMQNVFEKECFMSGQKLVAIISEAASAGISLQADRRAKNQKPRVHITMELPWSADKAVQQLGRSHRSNQSSAPSYKLLLSSVGGERRFASAVSSRLESLGALTQGDRRSAGAHGLGLSAFNMDTKYGRLALEKVLLAAIRRIQPEVVFPALPEGEATKVRN 204
            + ++++LGG   VAEMTGR+G +V+  +G+ VVY+ RN   + + M N+ EK+ FM G+K +A+ISEAASAGISLQADRRA NQ+ RVH+T+ELPWSAD+A+QQ GR+HRSNQ+SAP Y+LL +++GGERRFAS V+ RLE+LGALTQGDRR+    G  LSAFN D+ YG+ AL  +  + + ++   V+ P    G    VRN
Sbjct:   18 DDIIDQLGGPDCVAEMTGRRGMLVRASNGKGVVYQARNTKDVPIEMINMHEKQQFMDGKKHIAVISEAASAGISLQADRRAINQRRRVHVTLELPWSADRAIQQFGRTHRSNQASAPQYRLLFTNLGGERRFASVVAKRLETLGALTQGDRRA----GPSLSAFNYDSAYGKKALSMMYKSVMEQVDLPVLPPGCTSGNKEVVRN 218          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11173.1032.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN05_ECTSI4.930e-12398.51PHD-type domain-containing protein (Fragment) n=1 ... [more]
A0A6H5KWU5_9PHAE4.770e-8199.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3JZA5_9STRA1.130e-7065.40Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A8J2S7U1_9STRA1.200e-6972.73Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S4A0M8_9STRA3.230e-6972.73Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
UPI000BA8308B1.340e-6460.10protein strawberry notch homolog 1-like n=1 Tax=Li... [more]
A0A2P2LR77_RHIMU1.520e-6456.80Helicase_C_4 domain-containing protein n=1 Tax=Rhi... [more]
A0A2G3BC98_CAPCH1.620e-6457.14Protein strawberry notch-like protein 1 n=1 Tax=Ca... [more]
UPI00052813F41.710e-6458.38protein strawberry notch homolog 2-like n=1 Tax=Eu... [more]
D8QWV6_SELML1.980e-6454.63Helicase_C_4 domain-containing protein (Fragment) ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026937Strawberry notch, helicase C domainPFAMPF13871Helicase_C_4coord: 2..192
e-value: 6.9E-84
score: 281.7
IPR026741Protein strawberry notchPANTHERPTHR12706STRAWBERRY NOTCH-RELATEDcoord: 2..202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11173contigEcto-sp13_S_contig11173:1941..5283 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11173.1032.1mRNA_Ecto-sp13_S_contig11173.1032.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11173 1941..5283 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11173.1032.1 ID=prot_Ecto-sp13_S_contig11173.1032.1|Name=mRNA_Ecto-sp13_S_contig11173.1032.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=209bp
EQLVNELGGAGAVAEMTGRKGRMVKKPDGEVVYEKRNANGISMTMQNVFE
KECFMSGQKLVAIISEAASAGISLQADRRAKNQKPRVHITMELPWSADKA
VQQLGRSHRSNQSSAPSYKLLLSSVGGERRFASAVSSRLESLGALTQGDR
RSAGAHGLGLSAFNMDTKYGRLALEKVLLAAIRRIQPEVVFPALPEGEAT
KVRNTVQR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026937SBNO_Helicase_C_dom
IPR026741SNO