prot_Ecto-sp13_S_contig1112.980.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1112.980.1
Unique Nameprot_Ecto-sp13_S_contig1112.980.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length89
Homology
BLAST of mRNA_Ecto-sp13_S_contig1112.980.1 vs. uniprot
Match: D8LRM6_ECTSI (Dynein light chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRM6_ECTSI)

HSP 1 Score: 182 bits (461), Expect = 3.070e-58
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0
Query:    1 MSARPVIKTSTMAPDMQEAAIQVAQDAIRDNNLEKDIANAVKAAFEGLYPSLWHCFVGRNFGCFVTHEHTKFVYLYIGQIGVCLFSTA 88
            MSARPVIKTSTMAPDMQEAAIQVAQDAIRDNNLEKDIANAVKAAFEGLYPSLWHCFVGRNFGCFVTHEHTKFVYLYIGQIGVCLFSTA
Sbjct:    1 MSARPVIKTSTMAPDMQEAAIQVAQDAIRDNNLEKDIANAVKAAFEGLYPSLWHCFVGRNFGCFVTHEHTKFVYLYIGQIGVCLFSTA 88          
BLAST of mRNA_Ecto-sp13_S_contig1112.980.1 vs. uniprot
Match: A0A836CI24_9STRA (Dynein light chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI24_9STRA)

HSP 1 Score: 151 bits (382), Expect = 3.480e-46
Identity = 71/88 (80.68%), Postives = 80/88 (90.91%), Query Frame = 0
Query:    1 MSARPVIKTSTMAPDMQEAAIQVAQDAIRDNNLEKDIANAVKAAFEGLYPSLWHCFVGRNFGCFVTHEHTKFVYLYIGQIGVCLFSTA 88
            MSARPVIKTSTM  DMQEAAIQVAQDAI+DNNLEK+IA+A+K  FE +YPS+WHCFVGRNFG FVTHE +KF+Y YIGQ+GVCLFSTA
Sbjct:    1 MSARPVIKTSTMPADMQEAAIQVAQDAIKDNNLEKEIAHAIKTNFERIYPSVWHCFVGRNFGSFVTHEQSKFIYFYIGQMGVCLFSTA 88          
BLAST of mRNA_Ecto-sp13_S_contig1112.980.1 vs. uniprot
Match: A0A7S2STQ1_9STRA (Dynein light chain n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STQ1_9STRA)

HSP 1 Score: 123 bits (308), Expect = 1.540e-34
Identity = 56/88 (63.64%), Postives = 70/88 (79.55%), Query Frame = 0
Query:    1 MSARPVIKTSTMAPDMQEAAIQVAQDAIRDNNLEKDIANAVKAAFEGLYPSLWHCFVGRNFGCFVTHEHTKFVYLYIGQIGVCLFSTA 88
            M+ARPVIK S+M PDMQE AIQ AQDAI   N E++IA A++   E ++P+ WH  VGRNFGCFVTHE +KF+Y YIGQ+GVC+F+TA
Sbjct:   29 MAARPVIKHSSMTPDMQEMAIQCAQDAIAAKNTEQEIAMAIRQNIETMFPATWHVLVGRNFGCFVTHEASKFIYFYIGQVGVCMFATA 116          
BLAST of mRNA_Ecto-sp13_S_contig1112.980.1 vs. uniprot
Match: A0A7S1UG18_9STRA (Dynein light chain n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UG18_9STRA)

HSP 1 Score: 117 bits (294), Expect = 2.550e-32
Identity = 49/82 (59.76%), Postives = 67/82 (81.71%), Query Frame = 0
Query:    6 VIKTSTMAPDMQEAAIQVAQDAIRDNNLEKDIANAVKAAFEGLYPSLWHCFVGRNFGCFVTHEHTKFVYLYIGQIGVCLFST 87
            V+K S M  +MQ+AA+Q+AQDAIR++  E++IA+A+K  FE +Y + WHCFVGRNFGC+VTH+   FVY YIGQ+G+CLF+T
Sbjct:   41 VVKASRMEQEMQDAAVQIAQDAIREHMTEQEIASAIKQQFESIYHTTWHCFVGRNFGCYVTHQENAFVYFYIGQLGICLFAT 122          
BLAST of mRNA_Ecto-sp13_S_contig1112.980.1 vs. uniprot
Match: A0A7S1C452_9STRA (Dynein light chain n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C452_9STRA)

HSP 1 Score: 106 bits (264), Expect = 3.990e-27
Identity = 46/82 (56.10%), Postives = 61/82 (74.39%), Query Frame = 0
Query:    6 VIKTSTMAPDMQEAAIQVAQDAIRDNNLEKDIANAVKAAFEGLYPSLWHCFVGRNFGCFVTHEHTKFVYLYIGQIGVCLFST 87
            ++K + M   M E AI VA  AI+  N EK+ A+A+KA  E L+P +WHCFVGR FGC+VTHE +KF+Y Y+GQ+GVCLFS+
Sbjct:   95 IVKLNQMETVMAERAIDVALRAIKSCNTEKETASAIKAQMEALFPGVWHCFVGRKFGCYVTHESSKFIYFYVGQLGVCLFSS 176          
BLAST of mRNA_Ecto-sp13_S_contig1112.980.1 vs. uniprot
Match: A0A0R3WWJ5_HYDTA (Dynein light chain n=2 Tax=Hydatigena taeniaeformis TaxID=6205 RepID=A0A0R3WWJ5_HYDTA)

HSP 1 Score: 95.9 bits (237), Expect = 8.150e-24
Identity = 42/82 (51.22%), Postives = 56/82 (68.29%), Query Frame = 0
Query:    6 VIKTSTMAPDMQEAAIQVAQDAIRDNNLEKDIANAVKAAFEGLYPSLWHCFVGRNFGCFVTHEHTKFVYLYIGQIGVCLFST 87
            V+K + MA DMQ+ A+  AQDA+   N+EKDIA  +K  F+ LY   WHC VGRNFG +VTHE   F+Y Y+GQ+ + LF +
Sbjct:   28 VVKNADMAEDMQQRAVDCAQDAMNKYNVEKDIAAHIKKEFDRLYSPTWHCIVGRNFGSYVTHETKHFIYFYMGQVAILLFKS 109          
BLAST of mRNA_Ecto-sp13_S_contig1112.980.1 vs. uniprot
Match: U4LB13_PYROM (Dynein light chain n=1 Tax=Pyronema omphalodes (strain CBS 100304) TaxID=1076935 RepID=U4LB13_PYROM)

HSP 1 Score: 95.1 bits (235), Expect = 1.430e-23
Identity = 42/82 (51.22%), Postives = 57/82 (69.51%), Query Frame = 0
Query:    7 IKTSTMAPDMQEAAIQVAQDAIRDNNLEKDIANAVKAAFEGLYPSLWHCFVGRNFGCFVTHEHTKFVYLYIGQIGVCLFSTA 88
            +K+  MA DM  AA +VA+ A+++NN+EKDIA  +K  F+  Y + WHC VGRNFG FVTHE   F+Y Y+G + V L+ TA
Sbjct:   24 VKSVDMAEDMAAAAQEVAKKAMKENNVEKDIAQMIKKEFDAKYGNTWHCIVGRNFGSFVTHETKHFIYFYVGNLAVLLYKTA 105          
BLAST of mRNA_Ecto-sp13_S_contig1112.980.1 vs. uniprot
Match: K3WKC4_GLOUD (Dynein light chain n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKC4_GLOUD)

HSP 1 Score: 94.0 bits (232), Expect = 2.680e-23
Identity = 48/86 (55.81%), Postives = 59/86 (68.60%), Query Frame = 0
Query:    4 RPVIKTSTMAPDMQEAAIQVAQDAIRDNNLEKDIANAVKAAFEGLYPS-LWHCFVGRNFGCFVTHEHTKFVYLYIGQIGVCLFSTA 88
            +PV+KTSTM PD+Q+  I VAQ A+     E+ IA  VK  FE  Y   LWHC VGRN  C+VTHE +KF+Y YIGQ+ V LF+TA
Sbjct:    5 KPVVKTSTMDPDLQDEVILVAQHAMDTEIDEQQIAAKVKQHFEQKYHGMLWHCCVGRNVACYVTHEQSKFLYFYIGQMAVVLFATA 90          
BLAST of mRNA_Ecto-sp13_S_contig1112.980.1 vs. uniprot
Match: A0A0R3WU97_HYDTA (Dynein light chain n=1 Tax=Hydatigena taeniaeformis TaxID=6205 RepID=A0A0R3WU97_HYDTA)

HSP 1 Score: 93.6 bits (231), Expect = 4.140e-23
Identity = 41/82 (50.00%), Postives = 55/82 (67.07%), Query Frame = 0
Query:    6 VIKTSTMAPDMQEAAIQVAQDAIRDNNLEKDIANAVKAAFEGLYPSLWHCFVGRNFGCFVTHEHTKFVYLYIGQIGVCLFST 87
            VIK + M  +MQ+ A+  AQDA+   N+EKDIA  +K  F+ LY   WHC VGRNFG +VTHE   F+Y Y+GQ+ + LF +
Sbjct:   11 VIKNADMVDEMQQRAVDCAQDAMEKFNIEKDIAAHIKKEFDKLYSPTWHCIVGRNFGSYVTHESKHFIYFYMGQVAILLFKS 92          
BLAST of mRNA_Ecto-sp13_S_contig1112.980.1 vs. uniprot
Match: A0A068WE66_ECHGR (Dynein light chain n=3 Tax=Echinococcus TaxID=6209 RepID=A0A068WE66_ECHGR)

HSP 1 Score: 94.0 bits (232), Expect = 4.680e-23
Identity = 41/82 (50.00%), Postives = 56/82 (68.29%), Query Frame = 0
Query:    6 VIKTSTMAPDMQEAAIQVAQDAIRDNNLEKDIANAVKAAFEGLYPSLWHCFVGRNFGCFVTHEHTKFVYLYIGQIGVCLFST 87
            V+K + MA DMQ+ A+  AQDA+   ++EKDIA  +K  F+ LY   WHC VGRNFG +VTHE   F+Y Y+GQ+ + LF +
Sbjct:   28 VVKNADMAEDMQQRAVDCAQDAMNKYSVEKDIAAHIKKEFDRLYSPTWHCIVGRNFGSYVTHETKHFIYFYMGQVAILLFKS 109          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1112.980.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRM6_ECTSI3.070e-58100.00Dynein light chain n=2 Tax=Ectocarpus TaxID=2879 R... [more]
A0A836CI24_9STRA3.480e-4680.68Dynein light chain n=1 Tax=Tribonema minus TaxID=3... [more]
A0A7S2STQ1_9STRA1.540e-3463.64Dynein light chain n=1 Tax=Rhizochromulina marina ... [more]
A0A7S1UG18_9STRA2.550e-3259.76Dynein light chain n=1 Tax=Phaeomonas parva TaxID=... [more]
A0A7S1C452_9STRA3.990e-2756.10Dynein light chain n=1 Tax=Bicosoecida sp. CB-2014... [more]
A0A0R3WWJ5_HYDTA8.150e-2451.22Dynein light chain n=2 Tax=Hydatigena taeniaeformi... [more]
U4LB13_PYROM1.430e-2351.22Dynein light chain n=1 Tax=Pyronema omphalodes (st... [more]
K3WKC4_GLOUD2.680e-2355.81Dynein light chain n=1 Tax=Globisporangium ultimum... [more]
A0A0R3WU97_HYDTA4.140e-2350.00Dynein light chain n=1 Tax=Hydatigena taeniaeformi... [more]
A0A068WE66_ECHGR4.680e-2350.00Dynein light chain n=3 Tax=Echinococcus TaxID=6209... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001372Dynein light chain, type 1/2SMARTSM01375Dynein_light_2coord: 1..87
e-value: 2.7E-32
score: 123.3
IPR001372Dynein light chain, type 1/2PFAMPF01221Dynein_lightcoord: 5..86
e-value: 8.4E-28
score: 96.5
IPR001372Dynein light chain, type 1/2PANTHERPTHR11886DYNEIN LIGHT CHAINcoord: 5..86
IPR037177Dynein light chain superfamilyGENE3D3.30.740.10coord: 1..87
e-value: 1.4E-30
score: 107.2
IPR037177Dynein light chain superfamilySUPERFAMILY54648DLCcoord: 4..87
NoneNo IPR availablePANTHERPTHR11886:SF35DYNEIN LIGHT CHAIN 2, CYTOPLASMICcoord: 5..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1112contigEcto-sp13_S_contig1112:16756..18496 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1112.980.1mRNA_Ecto-sp13_S_contig1112.980.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1112 16128..18636 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1112.980.1 ID=prot_Ecto-sp13_S_contig1112.980.1|Name=mRNA_Ecto-sp13_S_contig1112.980.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=89bp
MSARPVIKTSTMAPDMQEAAIQVAQDAIRDNNLEKDIANAVKAAFEGLYP
SLWHCFVGRNFGCFVTHEHTKFVYLYIGQIGVCLFSTA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001372Dynein_light_chain_typ-1/2
IPR037177DLC_sf