prot_Ecto-sp13_S_contig11107.968.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11107.968.1
Unique Nameprot_Ecto-sp13_S_contig11107.968.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length81
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig11107.968.1 vs. uniprot
Match: A0A6H5KXS5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS5_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 6.500e-15
Identity = 58/81 (71.60%), Postives = 61/81 (75.31%), Query Frame = 0 
Query:    1 MEDPADRQAAADGGVGAGVAKNVGAAADNASGARTTXXXXGSCSSSLKPAASVAGETAPTPAPAAGCFVPRTVTQQQSSNA 81
            MED ADRQAA D GV   VAK+VGAAA  A+GARTTXXXX       K   SVA ETAPTPAPAAGCF+PRTVTQ QSSNA
Sbjct:    1 MEDSADRQAAGDSGV---VAKDVGAAAGTANGARTTXXXXXXXXX-XKLMVSVAEETAPTPAPAAGCFLPRTVTQHQSSNA 77
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11107.968.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KXS5_9PHAE6.500e-1571.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11107contigEcto-sp13_S_contig11107:2064..2306 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11107.968.1mRNA_Ecto-sp13_S_contig11107.968.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11107 2064..4458 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11107.968.1 ID=prot_Ecto-sp13_S_contig11107.968.1|Name=mRNA_Ecto-sp13_S_contig11107.968.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=81bp
MEDPADRQAAADGGVGAGVAKNVGAAADNASGARTTTTTTGSCSSSLKPA
ASVAGETAPTPAPAAGCFVPRTVTQQQSSNA
back to top