prot_Ecto-sp13_S_contig11078.942.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11078.942.1
Unique Nameprot_Ecto-sp13_S_contig11078.942.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length60
Homology
BLAST of mRNA_Ecto-sp13_S_contig11078.942.1 vs. uniprot
Match: D8LNH8_ECTSI (Anaphase-promoting complex subunit 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNH8_ECTSI)

HSP 1 Score: 123 bits (309), Expect = 3.670e-33
Identity = 58/59 (98.31%), Postives = 58/59 (98.31%), Query Frame = 0
Query:    1 MLTNFSKLPLDRIHNNLKMFMSGGDNKYDKSLPELQQLLWRLCSDGKLEQADGEYRLVK 59
            MLTNFSKLPLDRIHNNLKMFMSGGDNKYDKSLPELQQLLWRLCSDGKLE ADGEYRLVK
Sbjct:  238 MLTNFSKLPLDRIHNNLKMFMSGGDNKYDKSLPELQQLLWRLCSDGKLEHADGEYRLVK 296          
BLAST of mRNA_Ecto-sp13_S_contig11078.942.1 vs. uniprot
Match: A0A6H5KJM3_9PHAE (Anaphase-promoting complex subunit 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJM3_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 1.070e-32
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0
Query:    1 MLTNFSKLPLDRIHNNLKMFMSGGDNKYDKSLPELQQLLWRLCSDGKLEQADGEYRLVK 59
            MLTNFSKLPLDRIHNNLKMFMSGGDNKYDKSLPELQQLLWRLCSDGKLEQADGEYRLVK
Sbjct:  407 MLTNFSKLPLDRIHNNLKMFMSGGDNKYDKSLPELQQLLWRLCSDGKLEQADGEYRLVK 465          
BLAST of mRNA_Ecto-sp13_S_contig11078.942.1 vs. uniprot
Match: A0A7S0FHF1_9STRA (Anaphase-promoting complex subunit 2 n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FHF1_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 7.260e-14
Identity = 35/60 (58.33%), Postives = 43/60 (71.67%), Query Frame = 0
Query:    1 MLTNFSKLPLDRIHNNLKMFMSGGDNKYDKSLPELQQLLWRLCSDGKLE-QADGEYRLVK 59
            ML N  +LPLDRIHNNLKMF SG D+KYDK+  +L   L +LC + KLE   DG YR++K
Sbjct:  193 MLANLGQLPLDRIHNNLKMFASGSDHKYDKTARQLSSFLQKLCKEEKLECGGDGMYRVLK 252          
BLAST of mRNA_Ecto-sp13_S_contig11078.942.1 vs. uniprot
Match: A0A2R6W9W0_MARPO (Anaphase-promoting complex subunit 2 n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6W9W0_MARPO)

HSP 1 Score: 69.3 bits (168), Expect = 2.550e-12
Identity = 37/56 (66.07%), Postives = 41/56 (73.21%), Query Frame = 0
Query:    1 MLTNFSKLPLDRIHNNLKMFMSGGDNKYDKSLPELQQLLWRLCSDGKLEQADGEYR 56
            MLTNF  LPLDRIHN LKMF+S  D  YDKSLP+LQ  L RL S+ KLE  +G YR
Sbjct:  802 MLTNFESLPLDRIHNMLKMFVS--DPPYDKSLPQLQGFLARLVSEEKLEFREGSYR 855          
BLAST of mRNA_Ecto-sp13_S_contig11078.942.1 vs. uniprot
Match: A0A7S0GLJ3_9STRA (Anaphase-promoting complex subunit 2 n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GLJ3_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 6.390e-12
Identity = 33/60 (55.00%), Postives = 45/60 (75.00%), Query Frame = 0
Query:    1 MLTNFSKLPLDRIHNNLKMFMSGGDNKYDKSLPELQQLLWRLCSDGKLEQA-DGEYRLVK 59
            ML+N  +LPL+RIHN LKMF+SG D+KYDK+  +L  LL +LC + KLE   DG ++L+K
Sbjct:  401 MLSNLGQLPLERIHNMLKMFVSGSDHKYDKTPQQLSVLLQKLCKEDKLEVGPDGMFKLLK 460          
BLAST of mRNA_Ecto-sp13_S_contig11078.942.1 vs. uniprot
Match: A0A2P2KRW0_RHIMU (Anaphase-promoting complex subunit 2 n=4 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2KRW0_RHIMU)

HSP 1 Score: 65.1 bits (157), Expect = 7.870e-11
Identity = 36/59 (61.02%), Postives = 39/59 (66.10%), Query Frame = 0
Query:    1 MLTNFSKLPLDRIHNNLKMFMSGGDNKYDKSLPELQQLLWRLCSDGKLEQADGEYRLVK 59
            MLTNFS +PLDRIHN LKMF    D  YDKSL +LQ  L  L S+ KLE  DG Y L K
Sbjct:  497 MLTNFSSMPLDRIHNTLKMFCVA-DPPYDKSLQQLQSFLSGLVSEEKLELRDGVYSLKK 554          
BLAST of mRNA_Ecto-sp13_S_contig11078.942.1 vs. uniprot
Match: W1NHA0_AMBTC (Anaphase-promoting complex subunit 2 n=2 Tax=Amborella trichopoda TaxID=13333 RepID=W1NHA0_AMBTC)

HSP 1 Score: 64.7 bits (156), Expect = 1.080e-10
Identity = 35/57 (61.40%), Postives = 39/57 (68.42%), Query Frame = 0
Query:    1 MLTNFSKLPLDRIHNNLKMFMSGGDNKYDKSLPELQQLLWRLCSDGKLEQADGEYRL 57
            MLTNF  +PLDRIHN LKMF  G D  YDKSL +LQ  L  L S+ KLE  DG+Y L
Sbjct:  830 MLTNFGTMPLDRIHNTLKMFC-GTDLHYDKSLQQLQSFLSGLISEEKLEFRDGQYML 885          
BLAST of mRNA_Ecto-sp13_S_contig11078.942.1 vs. uniprot
Match: A0A7S4RA98_9STRA (Anaphase-promoting complex subunit 2 n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RA98_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 2.760e-10
Identity = 34/63 (53.97%), Postives = 44/63 (69.84%), Query Frame = 0
Query:    1 MLTNFSK---LPLDRIHNNLKMFMSGGDNKYDKSLPELQQLLWRLCSDGKLE-QADGEYRLVK 59
            ML+N  +   LPLDRIHN LKMF++G D  YDKS  +L+  L +LC + KLE  ADG Y+LV+
Sbjct:  696 MLSNLGRDGQLPLDRIHNYLKMFVTGSDQNYDKSPQQLRAFLQKLCREEKLECGADGMYKLVQ 758          
BLAST of mRNA_Ecto-sp13_S_contig11078.942.1 vs. uniprot
Match: A0A199UML6_ANACO (Anaphase-promoting complex subunit 2 n=3 Tax=Ananas comosus TaxID=4615 RepID=A0A199UML6_ANACO)

HSP 1 Score: 63.5 bits (153), Expect = 2.760e-10
Identity = 35/59 (59.32%), Postives = 38/59 (64.41%), Query Frame = 0
Query:    1 MLTNFSKLPLDRIHNNLKMFMSGGDNKYDKSLPELQQLLWRLCSDGKLEQADGEYRLVK 59
            MLTNF  +PLDRIHN LKMF    +  YDKSL +LQ  L  L SD KLE  DG Y L K
Sbjct:  715 MLTNFGSMPLDRIHNTLKMFCVA-EPSYDKSLQQLQAFLSGLISDEKLEMKDGLYYLKK 772          
BLAST of mRNA_Ecto-sp13_S_contig11078.942.1 vs. uniprot
Match: A9RVI7_PHYPA (Anaphase-promoting complex subunit 2 n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9RVI7_PHYPA)

HSP 1 Score: 63.2 bits (152), Expect = 3.780e-10
Identity = 34/56 (60.71%), Postives = 39/56 (69.64%), Query Frame = 0
Query:    1 MLTNFSKLPLDRIHNNLKMFMSGGDNKYDKSLPELQQLLWRLCSDGKLEQADGEYR 56
            MLTNF  LPLDRIHN LKMF+S  D  YDK+L +LQ  L RL  + KLE  +G YR
Sbjct:  715 MLTNFDSLPLDRIHNMLKMFVS--DPPYDKTLQQLQGFLGRLVGEEKLEFREGVYR 768          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11078.942.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNH8_ECTSI3.670e-3398.31Anaphase-promoting complex subunit 2 n=1 Tax=Ectoc... [more]
A0A6H5KJM3_9PHAE1.070e-32100.00Anaphase-promoting complex subunit 2 n=1 Tax=Ectoc... [more]
A0A7S0FHF1_9STRA7.260e-1458.33Anaphase-promoting complex subunit 2 n=1 Tax=Minut... [more]
A0A2R6W9W0_MARPO2.550e-1266.07Anaphase-promoting complex subunit 2 n=3 Tax=March... [more]
A0A7S0GLJ3_9STRA6.390e-1255.00Anaphase-promoting complex subunit 2 n=1 Tax=Probo... [more]
A0A2P2KRW0_RHIMU7.870e-1161.02Anaphase-promoting complex subunit 2 n=4 Tax=Rhizo... [more]
W1NHA0_AMBTC1.080e-1061.40Anaphase-promoting complex subunit 2 n=2 Tax=Ambor... [more]
A0A7S4RA98_9STRA2.760e-1053.97Anaphase-promoting complex subunit 2 n=2 Tax=Dityl... [more]
A0A199UML6_ANACO2.760e-1059.32Anaphase-promoting complex subunit 2 n=3 Tax=Anana... [more]
A9RVI7_PHYPA3.780e-1060.71Anaphase-promoting complex subunit 2 n=1 Tax=Physc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014786Anaphase-promoting complex subunit 2, C-terminalSMARTSM01013APC2_2coord: 1..57
e-value: 6.6E-15
score: 65.5
IPR014786Anaphase-promoting complex subunit 2, C-terminalPFAMPF08672ANAPC2coord: 1..57
e-value: 2.5E-20
score: 72.7
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 1..59
e-value: 3.3E-19
score: 70.6
NoneNo IPR availablePANTHERPTHR45957FAMILY NOT NAMEDcoord: 1..58
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 1..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11078contigEcto-sp13_S_contig11078:572..751 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11078.942.1mRNA_Ecto-sp13_S_contig11078.942.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11078 569..751 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11078.942.1 ID=prot_Ecto-sp13_S_contig11078.942.1|Name=mRNA_Ecto-sp13_S_contig11078.942.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=60bp
MLTNFSKLPLDRIHNNLKMFMSGGDNKYDKSLPELQQLLWRLCSDGKLEQ
ADGEYRLVK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014786APC_su2_C
IPR036388WH-like_DNA-bd_sf
IPR036390WH_DNA-bd_sf