prot_Ecto-sp13_S_contig11041.918.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11041.918.1
Unique Nameprot_Ecto-sp13_S_contig11041.918.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length483
Homology
BLAST of mRNA_Ecto-sp13_S_contig11041.918.1 vs. uniprot
Match: D7G697_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G697_ECTSI)

HSP 1 Score: 382 bits (981), Expect = 2.110e-119
Identity = 214/285 (75.09%), Postives = 227/285 (79.65%), Query Frame = 0
Query:    1 MVDAAVMRNVATRVNLEAFARAGGGVAGDIEVISVWESWCLLVVSPGEGAAEGTVGKVCKAISQAARRWAASHVSMPFESPTYEQQLLMYGKQLKNGRGQRGVEKEAKPSIMADLSRAVSKYGVDLWLDAFCLRGHVGEVAVKKAVEAVLRTELKQKYPGLLAKRRAADAPSSTVDGAGPPDLPPPKSQASAWGSGSFKNSAMAAGASPATGGLFGAPAVAAAGSKMSAXXXXXXXXXXXXXXXXXXXXXXXGGSCGDGVGAFPTFSFGTIASGPPARAWDMESF 285
            M+DAAVMRN+ATR  L+AFARAGGGVAGDIEVI V ESWC LVV+PGEGAAEGTVG+VCKAI QAARR AA H+SMP ESPTYEQQLLMYGKQLK GRGQRGVEKEAKPSIMADL RAVSK+GVDLWLDAFCLRGHVGE+AVKKAVEAVL TELK+KYPGLLAKRR  DAPSSTVDGAGPPDL PPKS+ S W SGSF +S  A+  S  T    GAPA          XXXXXX                 GGSCGDGVGAFP FSFGT ASGPPARAWDME+F
Sbjct:    1 MIDAAVMRNLATRAKLKAFARAGGGVAGDIEVIPVRESWCFLVVAPGEGAAEGTVGRVCKAIGQAARRLAAVHISMPLESPTYEQQLLMYGKQLKKGRGQRGVEKEAKPSIMADLLRAVSKHGVDLWLDAFCLRGHVGEIAVKKAVEAVLETELKKKYPGLLAKRRIPDAPSSTVDGAGPPDLAPPKSRPSEWDSGSFSSSGTASFPSRNT---TGAPAXXXXXXXXXXXXXXXXPARARQTAGTTGHVGVGGGSCGDGVGAFPAFSFGTTASGPPARAWDMETF 282          
BLAST of mRNA_Ecto-sp13_S_contig11041.918.1 vs. uniprot
Match: D7G696_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G696_ECTSI)

HSP 1 Score: 340 bits (873), Expect = 2.080e-105
Identity = 195/285 (68.42%), Postives = 210/285 (73.68%), Query Frame = 0
Query:    1 MVDAAVMRNVATRVNLEAFARAGGGVAGDIEVISVWESWCLLVVSPGEGAAEGTVGKVCKAISQAARRWAASHVSMPFESPTYEQQLLMYGKQLKNGRGQRGVEKEAKPSIMADLSRAVSKYGVDLWLDAFCLRGHVGEVAVKKAVEAVLRTELKQKYPGLLAKRRAADAPSSTVDGAGPPDLPPPKSQASAWGSGSFKNSAMAAGASPATGGLFGAPAVAAAGSKMSAXXXXXXXXXXXXXXXXXXXXXXXGGSCGDGVGAFPTFSFGTIASGPPARAWDMESF 285
            MVDAAVMRNVA R NLEAFARAGGGVAGDIEVI V ESW LLVV+PGE   EGT    CKAI QAARRWA +HVS+P           MY KQL   R QRGVEK++KP I+ADLSRAVSK+GVDLWLDAFCLRGHVGE+AVKKAVEAVLRT+LK+ YPGLLAKRR  DAPSSTVDGAGPPDL PPKS+A+AW SGSF +S  A+  S  T    GAPA AAAGSK S                        GGSCGDGVGAFP FSFGT ASGPPARAWDME+F
Sbjct:  218 MVDAAVMRNVAARANLEAFARAGGGVAGDIEVIPVRESWRLLVVAPGEERVEGT----CKAIGQAARRWADAHVSVPLNPQ-------MYVKQLHKSRWQRGVEKDSKPPIIADLSRAVSKHGVDLWLDAFCLRGHVGEIAVKKAVEAVLRTKLKKNYPGLLAKRRVPDAPSSTVDGAGPPDLAPPKSRANAWDSGSFSSSGTASFPSRNT---TGAPAGAAAGSKTSGQSSAASPARARQAAGTAGHVGVGGGSCGDGVGAFPAFSFGTTASGPPARAWDMETF 488          
BLAST of mRNA_Ecto-sp13_S_contig11041.918.1 vs. uniprot
Match: A0A6H5KWK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWK0_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 3.800e-38
Identity = 72/82 (87.80%), Postives = 77/82 (93.90%), Query Frame = 0
Query:   76 MPFESPTYEQQLLMYGKQLKNGRGQRGVEKEAKPSIMADLSRAVSKYGVDLWLDAFCLRGHVGEVAVKKAVEAVLRTELKQK 157
            MP ESPTYEQQLLMYGKQLK GRG+R VEKEAKPSIMADLSRAVS +GVDLWLDAFCLRGHVG++ VKKAVEAVLRT+LKQK
Sbjct:    1 MPLESPTYEQQLLMYGKQLKKGRGRRAVEKEAKPSIMADLSRAVSHHGVDLWLDAFCLRGHVGDMTVKKAVEAVLRTKLKQK 82          
BLAST of mRNA_Ecto-sp13_S_contig11041.918.1 vs. uniprot
Match: A0A6H5KMZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMZ8_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 2.450e-35
Identity = 106/130 (81.54%), Postives = 108/130 (83.08%), Query Frame = 0
Query:  282 MESFGNFAIAAGASPATRGVFGAAVLAGAKPKMLTPASVELPAGTGDGAAGTSSXXXXXXXXXXXXXXXXATAGDVIGGRRGGDG--AGDVPSFSFGTADRPPSRPPSSVRGSGEISSSGTDEKNSPATA 409
            MESFGNFAIAAGASPATRGVFGA VLAGA+PKMLTP SVELPAGTG GAA    XXXXXXXXXXXXXXX ATAG V GGR G DG  AG VP FSFGTA RPPSRPPSSV GSG+ISSSGT  K SP TA
Sbjct:    1 MESFGNFAIAAGASPATRGVFGAPVLAGAEPKMLTPTSVELPAGTGGGAAXXXXXXXXXXXXXXXXXXXIATAGHVSGGRSGCDGVGAGGVPPFSFGTAGRPPSRPPSSVWGSGKISSSGTATKTSPTTA 130          
BLAST of mRNA_Ecto-sp13_S_contig11041.918.1 vs. uniprot
Match: D8LBQ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBQ2_ECTSI)

HSP 1 Score: 140 bits (354), Expect = 2.060e-32
Identity = 93/207 (44.93%), Postives = 121/207 (58.45%), Query Frame = 0
Query:    1 MVDAAVMRNVATRVNLEAFARAGGGVAGDIEVISVWESWCLLVVSPGEGAAEGTVGKVCKAISQAARRWAASHVSMPFESPTYEQQLLMYGKQLKNGRGQRGVEKEAKPSIMADLSRAVSKYGVDLWLDAFCLRGHVGEVAVKKAVEAVLRTELKQ-------------KYPGLLAKRRA-ADAPSS---TVDGAGPPDLPPPKSQA 190
            M+DAA MRN+AT   LEAFA+AGGG  G+I+VI VWE+   LV+  GE  +E  VGKV  AIS+A R+WAA++VS+P ++     +  +  K         G   + KP ++ADLS AVS YGV+LWLD  CLR  V ++++K  VEAVL TE+ Q             KY  +LA   A AD PS    T   AG P L  P S+A
Sbjct:  291 MIDAAAMRNLATPAQLEAFAQAGGGATGEIKVIPVWETSSALVLGLGEETSESAVGKVRNAISEAVRQWAATNVSVPLKANAAHMRQTVSWKN--------GSANDFKPPLVADLSHAVSAYGVNLWLDGCCLRARVEDLSIKATVEAVLFTEITQQAVXXXXXXXXXXKYLDVLAGATAVADRPSPAAVTTAAAGLPILALPPSEA 489          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11041.918.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G697_ECTSI2.110e-11975.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G696_ECTSI2.080e-10568.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KWK0_9PHAE3.800e-3887.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KMZ8_9PHAE2.450e-3581.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBQ2_ECTSI2.060e-3244.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11041contigEcto-sp13_S_contig11041:3073..5554 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11041.918.1mRNA_Ecto-sp13_S_contig11041.918.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11041 11..5586 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11041.918.1 ID=prot_Ecto-sp13_S_contig11041.918.1|Name=mRNA_Ecto-sp13_S_contig11041.918.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=483bp
MVDAAVMRNVATRVNLEAFARAGGGVAGDIEVISVWESWCLLVVSPGEGA
AEGTVGKVCKAISQAARRWAASHVSMPFESPTYEQQLLMYGKQLKNGRGQ
RGVEKEAKPSIMADLSRAVSKYGVDLWLDAFCLRGHVGEVAVKKAVEAVL
RTELKQKYPGLLAKRRAADAPSSTVDGAGPPDLPPPKSQASAWGSGSFKN
SAMAAGASPATGGLFGAPAVAAAGSKMSAQSSAASPARTRQTAGTAGHVG
VVGGSCGDGVGAFPTFSFGTIASGPPARAWDMESFGNFAIAAGASPATRG
VFGAAVLAGAKPKMLTPASVELPAGTGDGAAGTSSAAAPSSAAGAAGAAA
TATAGDVIGGRRGGDGAGDVPSFSFGTADRPPSRPPSSVRGSGEISSSGT
DEKNSPATASGGAMSAAARRRRQQRHEEREIQRWRWEEREMQQQQQQQQL
EGLDSSSRGGGRERTRRVARHRWQRLLMRRRR*
back to top