prot_Ecto-sp13_S_contig11020.906.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11020.906.1
Unique Nameprot_Ecto-sp13_S_contig11020.906.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length182
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig11020.906.1 vs. uniprot
Match: A0A6H5JDT1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDT1_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 1.640e-32
Identity = 91/165 (55.15%), Postives = 104/165 (63.03%), Query Frame = 0 
Query:    1 MDAPAEQGGVIQRSPETQLALPSIAGSSQREQRQRSSRRQSQASGNGRDGIEGGGSDSPRLSQYYDDDSDELWVDDSVASTKKRCWSRSTMEQWHRDWHDNGFALEEAYGKCHNALCGQVFCFAGSYACLAAGAQPSTYDRGPFGIELVKYSDKLLQSSRNNGLG 165
            MDA A+QGGVIQ +PETQLALPSIAGSSQREQRQRSSRRQSQASG G DGIEGGGSDSPRLSQ  DDDS E W DDSV +TKKR  S+S       DW D+    +  YG  + +  G              G  P   DR   G +L+   D+LL++  N  LG
Sbjct:    1 MDASAKQGGVIQHAPETQLALPSIAGSSQREQRQRSSRRQSQASGYGGDGIEGGGSDSPRLSQDSDDDSAEFWADDSVVATKKR--SKSPFGAV-TDWVDDYRTRKSGYGPPYYSEYG--------------GDLPGECDR--MGADLIDV-DELLRNGANPNLG 145
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11020.906.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JDT1_9PHAE1.640e-3255.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11020contigEcto-sp13_S_contig11020:1653..2660 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11020.906.1mRNA_Ecto-sp13_S_contig11020.906.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11020 1578..2660 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11020.906.1 ID=prot_Ecto-sp13_S_contig11020.906.1|Name=mRNA_Ecto-sp13_S_contig11020.906.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=182bp
MDAPAEQGGVIQRSPETQLALPSIAGSSQREQRQRSSRRQSQASGNGRDG
IEGGGSDSPRLSQYYDDDSDELWVDDSVASTKKRCWSRSTMEQWHRDWHD
NGFALEEAYGKCHNALCGQVFCFAGSYACLAAGAQPSTYDRGPFGIELVK
YSDKLLQSSRNNGLGTYPLVLSVFHTKSHPT*
back to top