prot_Ecto-sp13_S_contig11018.900.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11018.900.1
Unique Nameprot_Ecto-sp13_S_contig11018.900.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length86
Homology
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BLAST of mRNA_Ecto-sp13_S_contig11018.900.1 vs. uniprot
Match: D7FHS6_ECTSI (Heat shock protein 40 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHS6_ECTSI)

HSP 1 Score: 164 bits (415), Expect = 2.000e-46
Identity = 84/86 (97.67%), Postives = 85/86 (98.84%), Query Frame = 0 
Query:    1 GFPVVGGEGDRGSLVIDFEVDFPSRLREAHLAALRVVLTEEEIALLEDVLKLMSTRKSKARPPMEPLEYLYTRNCSSDDEDDFINN 86
            GFPVVGG+GDRGSLVIDFEVDFPSRLREAHLAALRVVLTEEEIALLEDVLKLMSTRKSKARPPMEPLEYLYTR CSSDDEDDFINN
Sbjct:  417 GFPVVGGDGDRGSLVIDFEVDFPSRLREAHLAALRVVLTEEEIALLEDVLKLMSTRKSKARPPMEPLEYLYTRICSSDDEDDFINN 502
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11018.900.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FHS6_ECTSI2.000e-4697.67Heat shock protein 40 n=1 Tax=Ectocarpus siliculos... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11018contigEcto-sp13_S_contig11018:1288..2250 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11018.900.1mRNA_Ecto-sp13_S_contig11018.900.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11018 1288..2250 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11018.900.1 ID=prot_Ecto-sp13_S_contig11018.900.1|Name=mRNA_Ecto-sp13_S_contig11018.900.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=86bp
GFPVVGGEGDRGSLVIDFEVDFPSRLREAHLAALRVVLTEEEIALLEDVL
KLMSTRKSKARPPMEPLEYLYTRNCSSDDEDDFINN
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