prot_Ecto-sp13_S_contig11006.892.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11006.892.1
Unique Nameprot_Ecto-sp13_S_contig11006.892.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length101
Homology
BLAST of mRNA_Ecto-sp13_S_contig11006.892.1 vs. uniprot
Match: A0A6H5KRF6_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRF6_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 5.570e-48
Identity = 87/100 (87.00%), Postives = 91/100 (91.00%), Query Frame = 0
Query:    1 MTFREMIDKVFADTSKKMEGGSTGKKALAFLTLALGRVVSSSLPEKLVYDLQTFAVPTGTSDSEYLTTLQGLVHNVRNLGIVTPQNNTIQLAVRESVSDQ 100
            +TFRE IDKVFADTSKKM+ GSTGKKAL FLT AL RVVSSS PEKLVYDLQT AVPTGT  SEYLTTLQGLVHNVRNLG+VTPQ+NTIQLAVRESVSDQ
Sbjct:   38 ITFREKIDKVFADTSKKMDEGSTGKKALTFLTSALWRVVSSSSPEKLVYDLQTCAVPTGTPYSEYLTTLQGLVHNVRNLGVVTPQDNTIQLAVRESVSDQ 137          
BLAST of mRNA_Ecto-sp13_S_contig11006.892.1 vs. uniprot
Match: A0A6H5K8R6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8R6_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 8.760e-48
Identity = 86/100 (86.00%), Postives = 91/100 (91.00%), Query Frame = 0
Query:    1 MTFREMIDKVFADTSKKMEGGSTGKKALAFLTLALGRVVSSSLPEKLVYDLQTFAVPTGTSDSEYLTTLQGLVHNVRNLGIVTPQNNTIQLAVRESVSDQ 100
            MTFRE IDK+F+DTSKKME  STG+KALAFLT ALGRVVSSSLPEKLVYDLQT AVPTGT   EYLTTLQGLVH+VRNLGIVTPQ+NTIQLAV ESVSDQ
Sbjct:  153 MTFREKIDKIFSDTSKKMEERSTGRKALAFLTSALGRVVSSSLPEKLVYDLQTLAVPTGTPYGEYLTTLQGLVHSVRNLGIVTPQDNTIQLAVGESVSDQ 252          
BLAST of mRNA_Ecto-sp13_S_contig11006.892.1 vs. uniprot
Match: A0A6H5KBL4_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBL4_9PHAE)

HSP 1 Score: 168 bits (426), Expect = 1.200e-47
Identity = 89/100 (89.00%), Postives = 91/100 (91.00%), Query Frame = 0
Query:    1 MTFREMIDKVFADTSKKMEGGSTGKKALAFLTLALGRVVSSSLPEKLVYDLQTFAVPTGTSDSEYLTTLQGLVHNVRNLGIVTPQNNTIQLAVRESVSDQ 100
            MTFRE IDKVFADTSKKME GSTGKKALAFLT ALGRVVSSS PEKLVYDLQTFA PTGT  SEYLT LQGLV NVRNLG+VTPQ+NTIQLAVRESVSDQ
Sbjct:  242 MTFREKIDKVFADTSKKMEEGSTGKKALAFLTSALGRVVSSSSPEKLVYDLQTFAAPTGTPYSEYLTILQGLVQNVRNLGVVTPQDNTIQLAVRESVSDQ 341          
BLAST of mRNA_Ecto-sp13_S_contig11006.892.1 vs. uniprot
Match: A0A6H5K0Q4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Q4_9PHAE)

HSP 1 Score: 155 bits (392), Expect = 5.800e-45
Identity = 81/100 (81.00%), Postives = 89/100 (89.00%), Query Frame = 0
Query:    1 MTFREMIDKVFADTSKKMEGGSTGKKALAFLTLALGRVVSSSLPEKLVYDLQTFAVPTGTSDSEYLTTLQGLVHNVRNLGIVTPQNNTIQLAVRESVSDQ 100
            +TFRE I KVF+DTSKK+E GSTG+KALAFLT ALGRVV+SS PEK+VYDLQTFAVPTGT   EYLTTLQGL HNVRNL +VTPQ+NTIQLAVRE VSDQ
Sbjct:    7 ITFREKIGKVFSDTSKKIEEGSTGRKALAFLTSALGRVVNSSSPEKVVYDLQTFAVPTGTPYREYLTTLQGLGHNVRNLALVTPQDNTIQLAVREIVSDQ 106          
BLAST of mRNA_Ecto-sp13_S_contig11006.892.1 vs. uniprot
Match: A0A6H5JYQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYQ6_9PHAE)

HSP 1 Score: 143 bits (361), Expect = 1.420e-42
Identity = 75/83 (90.36%), Postives = 78/83 (93.98%), Query Frame = 0
Query:   18 MEGGSTGKKALAFLTLALGRVVSSSLPEKLVYDLQTFAVPTGTSDSEYLTTLQGLVHNVRNLGIVTPQNNTIQLAVRESVSDQ 100
            ME GSTGKKALAFLT ALG+VVSSS PEKLVYDLQ FAVPTGT +SEYLTTLQGLVHNVRNLGIVTPQ+NTIQLAVRESVSDQ
Sbjct:    1 MEEGSTGKKALAFLTSALGKVVSSSSPEKLVYDLQRFAVPTGTPNSEYLTTLQGLVHNVRNLGIVTPQDNTIQLAVRESVSDQ 83          
BLAST of mRNA_Ecto-sp13_S_contig11006.892.1 vs. uniprot
Match: D7G674_ECTSI (CCHC-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G674_ECTSI)

HSP 1 Score: 135 bits (340), Expect = 1.530e-37
Identity = 71/83 (85.54%), Postives = 74/83 (89.16%), Query Frame = 0
Query:   18 MEGGSTGKKALAFLTLALGRVVSSSLPEKLVYDLQTFAVPTGTSDSEYLTTLQGLVHNVRNLGIVTPQNNTIQLAVRESVSDQ 100
            M  GSTG++AL FLT ALGRVVSSS PEKLVYDLQTF VPTGT  SEYLTTL GLVHNVRNLGIVTPQ+NTIQLAVRESVSDQ
Sbjct:    1 MARGSTGREALTFLTSALGRVVSSSSPEKLVYDLQTFTVPTGTPYSEYLTTLHGLVHNVRNLGIVTPQDNTIQLAVRESVSDQ 83          
BLAST of mRNA_Ecto-sp13_S_contig11006.892.1 vs. uniprot
Match: A0A6H5K255_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K255_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 6.660e-36
Identity = 73/81 (90.12%), Postives = 75/81 (92.59%), Query Frame = 0
Query:   20 GGSTGKKALAFLTLALGRVVSSSLPEKLVYDLQTFAVPTGTSDSEYLTTLQGLVHNVRNLGIVTPQNNTIQLAVRESVSDQ 100
            G +TGKKALAFLT ALGRVVSSS PEKLVYDLQTFAVPTGT  SEYLTTLQGLVHNVRNL IVTPQ+NTIQLAVRESVSDQ
Sbjct:  455 GEATGKKALAFLTSALGRVVSSSSPEKLVYDLQTFAVPTGTPYSEYLTTLQGLVHNVRNLAIVTPQDNTIQLAVRESVSDQ 535          
BLAST of mRNA_Ecto-sp13_S_contig11006.892.1 vs. uniprot
Match: A0A6H5K9S7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9S7_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 5.280e-16
Identity = 38/43 (88.37%), Postives = 39/43 (90.70%), Query Frame = 0
Query:   18 MEGGSTGKKALAFLTLALGRVVSSSLPEKLVYDLQTFAVPTGT 60
            ME GSTG+KAL FLT ALGRVVSSS PEKLVYDLQTFAVPTGT
Sbjct:    1 MEEGSTGRKALTFLTSALGRVVSSSSPEKLVYDLQTFAVPTGT 43          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11006.892.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5KRF6_9PHAE5.570e-4887.00CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K8R6_9PHAE8.760e-4886.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBL4_9PHAE1.200e-4789.00CCHC-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5K0Q4_9PHAE5.800e-4581.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYQ6_9PHAE1.420e-4290.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G674_ECTSI1.530e-3785.54CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K255_9PHAE6.660e-3690.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9S7_9PHAE5.280e-1688.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 27..35
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..100
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..40
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 36..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11006contigEcto-sp13_S_contig11006:5254..5556 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11006.892.1mRNA_Ecto-sp13_S_contig11006.892.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11006 4577..5599 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11006.892.1 ID=prot_Ecto-sp13_S_contig11006.892.1|Name=mRNA_Ecto-sp13_S_contig11006.892.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=101bp
MTFREMIDKVFADTSKKMEGGSTGKKALAFLTLALGRVVSSSLPEKLVYD
LQTFAVPTGTSDSEYLTTLQGLVHNVRNLGIVTPQNNTIQLAVRESVSDQ
*
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