prot_Ecto-sp13_S_contig11.875.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11.875.1 vs. uniprot
Match: D7G4R0_ECTSI (Ribosomal large subunit pseudouridine synthase A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4R0_ECTSI) HSP 1 Score: 603 bits (1554), Expect = 4.900e-217 Identity = 299/317 (94.32%), Postives = 305/317 (96.21%), Query Frame = 0
Query: 1 MSQKKCSKEEDSCNQHSNSD-SGVDVIFSDTDMVVLNKPTGLRTVPGKAVGPEAETRVHVEWHSGTKRQRQEFWTNVVHTACDSLLNDEKTEGEEEFRDHLRRLTKENNVPRKRSKFHNYTAVTLGLEGEEGDMVSARLWDTVDGHLKKVVGPGVDCLLTRVQSRWPEARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVLEGRMAKTPKSGEVTAKLRPDTDNRPKQMFCEEKGNEAHTNWERIKWKEDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTPEGKAKSDRLLLHARRISFPH 316
MS K +K EDS NQHS+SD S VDVIFSD D+VVLNKPTGLRTVPGKAVGPEAETRVHVEWHSGTKRQRQEFWT+VVHTAC+SLLNDEKTEGEEEFRDHLRRLTKENNVPRKRSKFHNYTAVTLGLEGEEGD VSARLWDTVDGHLKK VGPGVDCLLTRVQSRWPEARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVLEGRMAKTPKSGEVTAKLRPDTDNRPKQMFCEEKGNEAHTNWERIK KEDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTPEG AKS+RLLLHARRISFPH
Sbjct: 1 MSHDKSTKGEDSRNQHSSSDCSDVDVIFSDPDIVVLNKPTGLRTVPGKAVGPEAETRVHVEWHSGTKRQRQEFWTDVVHTACESLLNDEKTEGEEEFRDHLRRLTKENNVPRKRSKFHNYTAVTLGLEGEEGDKVSARLWDTVDGHLKKEVGPGVDCLLTRVQSRWPEARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVLEGRMAKTPKSGEVTAKLRPDTDNRPKQMFCEEKGNEAHTNWERIKRKEDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTPEGTAKSERLLLHARRISFPH 317
BLAST of mRNA_Ecto-sp13_S_contig11.875.1 vs. uniprot
Match: UPI001C07D4FB (RluA family pseudouridine synthase n=1 Tax=Amphritea atlantica TaxID=355243 RepID=UPI001C07D4FB) HSP 1 Score: 159 bits (401), Expect = 6.210e-44 Identity = 80/177 (45.20%), Postives = 115/177 (64.97%), Query Frame = 0
Query: 143 DGHLKKVVGPGVD---CLLTRVQSRWPEARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVLEGRMAKTPKSGEVTAKLRPDTDNRPKQMFCEEKGNEAHTNWERIKWKEDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTPEGKAKSDRLLLHARRISFPH 316
D L V G G D CL RVQ R+P A VHRLD TSG++V+ L+ E+ R + QF+ER+ K Y A+++GR+ + SG V LR D DNRP Q+ E+G A T+W+ +++ + T V+ TP+TGR+HQ+R+H +LGHP++GD Y P+ + +S+RLLLHA +SF H
Sbjct: 23 DPDLLSVPGRGEDKQDCLWRRVQQRFPTALIVHRLDYPTSGIMVLGLSRESHRHLSIQFQERLTEKRYQAIVDGRLPRA--SGTVDQPLRCDWDNRPLQIIDHEQGKPAQTHWQVLEYLTNATRVELTPITGRSHQLRVHMQYLGHPILGDRFYANPDQRTRSERLLLHAESLSFNH 197
BLAST of mRNA_Ecto-sp13_S_contig11.875.1 vs. uniprot
Match: UPI0019D3727C (pseudouridine synthase n=1 Tax=Parahaliea mediterranea TaxID=651086 RepID=UPI0019D3727C) HSP 1 Score: 159 bits (401), Expect = 8.080e-44 Identity = 76/162 (46.91%), Postives = 111/162 (68.52%), Query Frame = 0
Query: 155 DCLLTRVQSRWPEARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVLEGRMAKTPKSGEVTAKLRPDTDNRPKQMFCEEKGNEAHTNWERIKWKEDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTPEGKAKSDRLLLHARRISFPH 316
DCL+TR+Q +P A VHRLD DTSG++++ LT E + RQF++R KTYTAV+ G A+ SGE+ + D DNRP+Q+ C E+G +A T ++ ++ + DR+ ++ +PVTGR+HQ+R+H LGHP++G +Y PE A +DRL+LHA RI F H
Sbjct: 47 DCLITRLQRDYPSASIVHRLDLDTSGIMIIPLTRECHAHISRQFQQRRVEKTYTAVVWGEPARD--SGEIDLPIACDWDNRPRQLICHERGKQALTRYQVLERRGDRSRLELSPVTGRSHQLRIHMRELGHPILGCDMYAHPEALAMADRLMLHATRIGFEH 206
BLAST of mRNA_Ecto-sp13_S_contig11.875.1 vs. uniprot
Match: A0A1Q8FZ42_9PROT (Pseudouridine synthase n=2 Tax=Maricaulis TaxID=74317 RepID=A0A1Q8FZ42_9PROT) HSP 1 Score: 158 bits (400), Expect = 1.210e-43 Identity = 77/162 (47.53%), Postives = 106/162 (65.43%), Query Frame = 0
Query: 155 DCLLTRVQSRWPEARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVLEGRMAKTPKSGEVTAKLRPDTDNRPKQMFCEEKGNEAHTNWERIKWKEDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTPEGKAKSDRLLLHARRISFPH 316
DCL R ++ +P AR +HRLD DTSG++V+ALT A + +QF +R SK+Y A ++G M T SG V L D NRP+QM C E+G A T+WE + + + V P+TGR+HQ+R+H +HLGHP++GD+LY P+ A SDRL LHAR + F H
Sbjct: 49 DCLEARARADFPTARIIHRLDMDTSGVIVLALTAHAQAHIGKQFEKRQTSKSYIARVQGEM--TQSSGRVDQPLITDWPNRPRQMICHERGRRAVTDWEVLDIADGVSRVRLAPLTGRSHQLRVHMLHLGHPILGDNLYAPPDALAASDRLCLHARELGFRH 208
BLAST of mRNA_Ecto-sp13_S_contig11.875.1 vs. uniprot
Match: A0A1H9I0B1_9GAMM (Pseudouridine synthase n=1 Tax=Amphritea atlantica TaxID=355243 RepID=A0A1H9I0B1_9GAMM) HSP 1 Score: 157 bits (398), Expect = 1.740e-43 Identity = 84/180 (46.67%), Postives = 114/180 (63.33%), Query Frame = 0
Query: 146 LKKVVGPGVD---CLLTRVQSRWPEARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVLEGRMAKTPKSGEVTAKLRPDTDNRPKQMFCEEKGNEAHTNWERIKWKEDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTPEGKAKSDRLLLHARRISFPH-VSEHP 321
L V G G D CL RVQ +P AR VHRLD TSG++V+AL+ + R + QF+ER K+Y A++ GR+AK SG V LR D +NRP Q+ ++G A T+W I+ +D + V+ TP+TGR+HQ+R+H LGHP++GD Y TP +S+RLLLHA +SF H VS P
Sbjct: 26 LLSVPGRGADKQDCLWRRVQQHYPTARIVHRLDYATSGVMVLALSATSHRHLSIQFQERKTDKSYQAIVAGRLAKN--SGTVNQPLRCDWENRPLQIIDHQQGKSAQTHWRLIEQLDDASRVELTPITGRSHQLRVHMQFLGHPILGDRFYATPRQIERSERLLLHAHSLSFSHPVSGEP 203
BLAST of mRNA_Ecto-sp13_S_contig11.875.1 vs. uniprot
Match: A0A136HHU2_9GAMM (RNA pseudouridine synthase n=2 Tax=Neptuniibacter TaxID=459520 RepID=A0A136HHU2_9GAMM) HSP 1 Score: 157 bits (396), Expect = 3.350e-43 Identity = 81/167 (48.50%), Postives = 110/167 (65.87%), Query Frame = 0
Query: 155 DCLLTRVQSRWPEARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVLEGRMAKTPKSGEVTAKLRPDTDNRPKQMFCEEKGNEAHTNW-----ERIKWKEDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTPEGKAKSDRLLLHARRISFPH 316
DCL RVQ+++P AR VHRLD TSG++V+ALT++A R + R F+ER K Y A++ G T G V LR D +NRP Q+ E+G A T+W ER + T V+ TP+TGR+HQ+R+H +GHP++GD Y TPEG A+SDRLLLHA +++FPH
Sbjct: 32 DCLWRRVQTQFPTARVVHRLDYATSGVMVLALTLDAQRALNRSFQERKTHKRYQAIIAG--TPTESDGSVELPLRCDWENRPLQIVDFEQGKSALTHWKVLATERAAQGIENTRVELTPITGRSHQLRVHMQAMGHPILGDRFYATPEGVAQSDRLLLHAEQLAFPH 196
BLAST of mRNA_Ecto-sp13_S_contig11.875.1 vs. uniprot
Match: A0A6P2AHX5_9BACT (RluA family pseudouridine synthase n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A6P2AHX5_9BACT) HSP 1 Score: 156 bits (394), Expect = 6.470e-43 Identity = 80/167 (47.90%), Postives = 111/167 (66.47%), Query Frame = 0
Query: 154 VDCLLTRVQSRWPEARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVLEGRMAKTPKSGEVTAKLRPDTD--NRPKQMFCEEKGNEAHTNWERIKWKED--RTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTPEGKAKSDRLLLHARRISFPH 316
+DCL TRVQ ++PEAR VHRLD+DTSG++VMA EA RE+ RQF +R K YTA++ G + +G + +R D D N+P+Q+ E G + T++ I+ +D RT +D P+TGR+HQ+R+H +GHP++GD LY PE A SDRLLLHAR + F H
Sbjct: 31 LDCLATRVQRQYPEARIVHRLDRDTSGVIVMAFDAEAHRELSRQFHDREVEKRYTAIVAGHVQSD--TGRIDLPIRKDMDPANKPRQLIDHEHGRPSITDYTVIERLDDPQRTRLDLKPITGRSHQLRLHLKEIGHPILGDDLYAPPEVLALSDRLLLHARELWFVH 195
BLAST of mRNA_Ecto-sp13_S_contig11.875.1 vs. uniprot
Match: A0A2E2KKK0_9GAMM (RNA pseudouridine synthase n=1 Tax=Oceanospirillaceae bacterium TaxID=1899355 RepID=A0A2E2KKK0_9GAMM) HSP 1 Score: 155 bits (393), Expect = 8.110e-43 Identity = 79/162 (48.77%), Postives = 106/162 (65.43%), Query Frame = 0
Query: 155 DCLLTRVQSRWPEARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVLEGRMAKTPKSGEVTAKLRPDTDNRPKQMFCEEKGNEAHTNWERIKWKEDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTPEGKAKSDRLLLHARRISFPH 316
DCL RVQ+ +P AR VHRLD TSGL+V+ALT+EA R++ R F+ER K Y A++ G+ ++ K G V L D +NRP Q+ E G A T+W+ T V+ TP+TGR+HQ+R+H +GHP++GD Y + KA SDRLLLHA R+SFPH
Sbjct: 32 DCLWRRVQAEFPTARVVHRLDYATSGLMVLALTLEAQRDISRSFQERKTGKLYQAIISGKPSE--KQGSVDLPLICDWENRPLQIVDHEHGKNALTHWKATGEDSRGTRVELTPITGRSHQLRVHMQAMGHPIIGDRFYADEDSKALSDRLLLHAERLSFPH 191
BLAST of mRNA_Ecto-sp13_S_contig11.875.1 vs. uniprot
Match: A0A8A4TYK2_9BACT (Pseudouridine synthase n=1 Tax=Sulfidibacter corallicola TaxID=2818388 RepID=A0A8A4TYK2_9BACT) HSP 1 Score: 156 bits (394), Expect = 8.410e-43 Identity = 80/162 (49.38%), Postives = 101/162 (62.35%), Query Frame = 0
Query: 155 DCLLTRVQSRWPEARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVLEGRMAKTPKSGEVTAKLRPDTDNRPKQMFCEEKGNEAHTNWERIKWKEDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTPEGKAKSDRLLLHARRISFPH 316
D L +R Q PEAR VHRLD +TSG+ VMAL ++ RE+ RQF +R KTY A+ G M + GEV L D NRP+QM E G +A T W I + DRTWV TP+TGR+HQ+R+H +GHP++GD LY PE + RLLLHA +SF H
Sbjct: 45 DSLASRAQQLEPEARTVHRLDCETSGVTVMALDADSHRELSRQFHDREVLKTYVAICAGMMET--EQGEVNLPLVCDWPNRPRQMVDHENGKQAQTFWRVIHREPDRTWVQLTPITGRSHQLRVHLREIGHPILGDRLYAPPEVMRMAPRLLLHAEMLSFSH 204
BLAST of mRNA_Ecto-sp13_S_contig11.875.1 vs. uniprot
Match: UPI001E4AF6DC (RluA family pseudouridine synthase n=1 Tax=Amphritea pacifica TaxID=2811233 RepID=UPI001E4AF6DC) HSP 1 Score: 155 bits (393), Expect = 9.670e-43 Identity = 77/162 (47.53%), Postives = 106/162 (65.43%), Query Frame = 0
Query: 155 DCLLTRVQSRWPEARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVLEGRMAKTPKSGEVTAKLRPDTDNRPKQMFCEEKGNEAHTNWERIKWKEDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTPEGKAKSDRLLLHARRISFPH 316
DCL RVQ +P AR VHRLD TSG++V+AL + R + QF+ER K+Y AV+ G++AK SG + LR D DNRP Q+ ++G A T+W I+ +D V+ TP+TGR+HQ+R+H LGHP++GD Y TP +S+RLLLHAR ++F H
Sbjct: 38 DCLWRRVQQHYPTARIVHRLDYATSGVMVLALNAASHRHLSIQFQERKTGKSYQAVVAGQLAKN--SGTINQPLRCDWDNRPLQIIDHQQGKSAQTHWRLIEPLDDACRVELTPITGRSHQLRVHMQFLGHPILGDRFYATPSQIERSERLLLHARSLTFSH 197 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11.875.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig11.875.1 ID=prot_Ecto-sp13_S_contig11.875.1|Name=mRNA_Ecto-sp13_S_contig11.875.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=322bpback to top |