mRNA_Ecto-sp13_S_contig11.875.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig11.875.1
Unique NamemRNA_Ecto-sp13_S_contig11.875.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig11.875.1 vs. uniprot
Match: D7G4R0_ECTSI (Ribosomal large subunit pseudouridine synthase A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4R0_ECTSI)

HSP 1 Score: 603 bits (1554), Expect = 4.900e-217
Identity = 299/317 (94.32%), Postives = 305/317 (96.21%), Query Frame = 1 
Query:    1 MSQKKCSKEEDSCNQHSNSD-SGVDVIFSDTDMVVLNKPTGLRTVPGKAVGPEAETRVHVEWHSGTKRQRQEFWTNVVHTACDSLLNDEKTEGEEEFRDHLRRLTKENNVPRKRSKFHNYTAVTLGLEGEEGDMVSARLWDTVDGHLKKVVGPGVDCLLTRVQSRWPEARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVLEGRMAKTPKSGEVTAKLRPDTDNRPKQMFCEEKGNEAHTNWERIKWKEDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTPEGKAKSDRLLLHARRISFPH 948
            MS  K +K EDS NQHS+SD S VDVIFSD D+VVLNKPTGLRTVPGKAVGPEAETRVHVEWHSGTKRQRQEFWT+VVHTAC+SLLNDEKTEGEEEFRDHLRRLTKENNVPRKRSKFHNYTAVTLGLEGEEGD VSARLWDTVDGHLKK VGPGVDCLLTRVQSRWPEARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVLEGRMAKTPKSGEVTAKLRPDTDNRPKQMFCEEKGNEAHTNWERIK KEDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTPEG AKS+RLLLHARRISFPH
Sbjct:    1 MSHDKSTKGEDSRNQHSSSDCSDVDVIFSDPDIVVLNKPTGLRTVPGKAVGPEAETRVHVEWHSGTKRQRQEFWTDVVHTACESLLNDEKTEGEEEFRDHLRRLTKENNVPRKRSKFHNYTAVTLGLEGEEGDKVSARLWDTVDGHLKKEVGPGVDCLLTRVQSRWPEARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVLEGRMAKTPKSGEVTAKLRPDTDNRPKQMFCEEKGNEAHTNWERIKRKEDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTPEGTAKSERLLLHARRISFPH 317
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BLAST of mRNA_Ecto-sp13_S_contig11.875.1 vs. uniprot
Match: UPI001C07D4FB (RluA family pseudouridine synthase n=1 Tax=Amphritea atlantica TaxID=355243 RepID=UPI001C07D4FB)

HSP 1 Score: 159 bits (401), Expect = 6.210e-44
Identity = 80/177 (45.20%), Postives = 115/177 (64.97%), Query Frame = 1 
Query:  427 DGHLKKVVGPGVD---CLLTRVQSRWPEARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVLEGRMAKTPKSGEVTAKLRPDTDNRPKQMFCEEKGNEAHTNWERIKWKEDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTPEGKAKSDRLLLHARRISFPH 948
            D  L  V G G D   CL  RVQ R+P A  VHRLD  TSG++V+ L+ E+ R +  QF+ER+  K Y A+++GR+ +   SG V   LR D DNRP Q+   E+G  A T+W+ +++  + T V+ TP+TGR+HQ+R+H  +LGHP++GD  Y  P+ + +S+RLLLHA  +SF H
Sbjct:   23 DPDLLSVPGRGEDKQDCLWRRVQQRFPTALIVHRLDYPTSGIMVLGLSRESHRHLSIQFQERLTEKRYQAIVDGRLPRA--SGTVDQPLRCDWDNRPLQIIDHEQGKPAQTHWQVLEYLTNATRVELTPITGRSHQLRVHMQYLGHPILGDRFYANPDQRTRSERLLLHAESLSFNH 197
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BLAST of mRNA_Ecto-sp13_S_contig11.875.1 vs. uniprot
Match: UPI0019D3727C (pseudouridine synthase n=1 Tax=Parahaliea mediterranea TaxID=651086 RepID=UPI0019D3727C)

HSP 1 Score: 159 bits (401), Expect = 8.080e-44
Identity = 76/162 (46.91%), Postives = 111/162 (68.52%), Query Frame = 1 
Query:  463 DCLLTRVQSRWPEARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVLEGRMAKTPKSGEVTAKLRPDTDNRPKQMFCEEKGNEAHTNWERIKWKEDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTPEGKAKSDRLLLHARRISFPH 948
            DCL+TR+Q  +P A  VHRLD DTSG++++ LT E    + RQF++R   KTYTAV+ G  A+   SGE+   +  D DNRP+Q+ C E+G +A T ++ ++ + DR+ ++ +PVTGR+HQ+R+H   LGHP++G  +Y  PE  A +DRL+LHA RI F H
Sbjct:   47 DCLITRLQRDYPSASIVHRLDLDTSGIMIIPLTRECHAHISRQFQQRRVEKTYTAVVWGEPARD--SGEIDLPIACDWDNRPRQLICHERGKQALTRYQVLERRGDRSRLELSPVTGRSHQLRIHMRELGHPILGCDMYAHPEALAMADRLMLHATRIGFEH 206
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BLAST of mRNA_Ecto-sp13_S_contig11.875.1 vs. uniprot
Match: A0A1Q8FZ42_9PROT (Pseudouridine synthase n=2 Tax=Maricaulis TaxID=74317 RepID=A0A1Q8FZ42_9PROT)

HSP 1 Score: 158 bits (400), Expect = 1.210e-43
Identity = 77/162 (47.53%), Postives = 106/162 (65.43%), Query Frame = 1 
Query:  463 DCLLTRVQSRWPEARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVLEGRMAKTPKSGEVTAKLRPDTDNRPKQMFCEEKGNEAHTNWERIKWKEDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTPEGKAKSDRLLLHARRISFPH 948
            DCL  R ++ +P AR +HRLD DTSG++V+ALT  A   + +QF +R  SK+Y A ++G M  T  SG V   L  D  NRP+QM C E+G  A T+WE +   +  + V   P+TGR+HQ+R+H +HLGHP++GD+LY  P+  A SDRL LHAR + F H
Sbjct:   49 DCLEARARADFPTARIIHRLDMDTSGVIVLALTAHAQAHIGKQFEKRQTSKSYIARVQGEM--TQSSGRVDQPLITDWPNRPRQMICHERGRRAVTDWEVLDIADGVSRVRLAPLTGRSHQLRVHMLHLGHPILGDNLYAPPDALAASDRLCLHARELGFRH 208
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BLAST of mRNA_Ecto-sp13_S_contig11.875.1 vs. uniprot
Match: A0A1H9I0B1_9GAMM (Pseudouridine synthase n=1 Tax=Amphritea atlantica TaxID=355243 RepID=A0A1H9I0B1_9GAMM)

HSP 1 Score: 157 bits (398), Expect = 1.740e-43
Identity = 84/180 (46.67%), Postives = 114/180 (63.33%), Query Frame = 1 
Query:  436 LKKVVGPGVD---CLLTRVQSRWPEARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVLEGRMAKTPKSGEVTAKLRPDTDNRPKQMFCEEKGNEAHTNWERIKWKEDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTPEGKAKSDRLLLHARRISFPH-VSEHP 963
            L  V G G D   CL  RVQ  +P AR VHRLD  TSG++V+AL+  + R +  QF+ER   K+Y A++ GR+AK   SG V   LR D +NRP Q+   ++G  A T+W  I+  +D + V+ TP+TGR+HQ+R+H   LGHP++GD  Y TP    +S+RLLLHA  +SF H VS  P
Sbjct:   26 LLSVPGRGADKQDCLWRRVQQHYPTARIVHRLDYATSGVMVLALSATSHRHLSIQFQERKTDKSYQAIVAGRLAKN--SGTVNQPLRCDWENRPLQIIDHQQGKSAQTHWRLIEQLDDASRVELTPITGRSHQLRVHMQFLGHPILGDRFYATPRQIERSERLLLHAHSLSFSHPVSGEP 203
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BLAST of mRNA_Ecto-sp13_S_contig11.875.1 vs. uniprot
Match: A0A136HHU2_9GAMM (RNA pseudouridine synthase n=2 Tax=Neptuniibacter TaxID=459520 RepID=A0A136HHU2_9GAMM)

HSP 1 Score: 157 bits (396), Expect = 3.350e-43
Identity = 81/167 (48.50%), Postives = 110/167 (65.87%), Query Frame = 1 
Query:  463 DCLLTRVQSRWPEARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVLEGRMAKTPKSGEVTAKLRPDTDNRPKQMFCEEKGNEAHTNW-----ERIKWKEDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTPEGKAKSDRLLLHARRISFPH 948
            DCL  RVQ+++P AR VHRLD  TSG++V+ALT++A R + R F+ER   K Y A++ G    T   G V   LR D +NRP Q+   E+G  A T+W     ER     + T V+ TP+TGR+HQ+R+H   +GHP++GD  Y TPEG A+SDRLLLHA +++FPH
Sbjct:   32 DCLWRRVQTQFPTARVVHRLDYATSGVMVLALTLDAQRALNRSFQERKTHKRYQAIIAG--TPTESDGSVELPLRCDWENRPLQIVDFEQGKSALTHWKVLATERAAQGIENTRVELTPITGRSHQLRVHMQAMGHPILGDRFYATPEGVAQSDRLLLHAEQLAFPH 196
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BLAST of mRNA_Ecto-sp13_S_contig11.875.1 vs. uniprot
Match: A0A6P2AHX5_9BACT (RluA family pseudouridine synthase n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A6P2AHX5_9BACT)

HSP 1 Score: 156 bits (394), Expect = 6.470e-43
Identity = 80/167 (47.90%), Postives = 111/167 (66.47%), Query Frame = 1 
Query:  460 VDCLLTRVQSRWPEARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVLEGRMAKTPKSGEVTAKLRPDTD--NRPKQMFCEEKGNEAHTNWERIKWKED--RTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTPEGKAKSDRLLLHARRISFPH 948
            +DCL TRVQ ++PEAR VHRLD+DTSG++VMA   EA RE+ RQF +R   K YTA++ G +     +G +   +R D D  N+P+Q+   E G  + T++  I+  +D  RT +D  P+TGR+HQ+R+H   +GHP++GD LY  PE  A SDRLLLHAR + F H
Sbjct:   31 LDCLATRVQRQYPEARIVHRLDRDTSGVIVMAFDAEAHRELSRQFHDREVEKRYTAIVAGHVQSD--TGRIDLPIRKDMDPANKPRQLIDHEHGRPSITDYTVIERLDDPQRTRLDLKPITGRSHQLRLHLKEIGHPILGDDLYAPPEVLALSDRLLLHARELWFVH 195
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BLAST of mRNA_Ecto-sp13_S_contig11.875.1 vs. uniprot
Match: A0A2E2KKK0_9GAMM (RNA pseudouridine synthase n=1 Tax=Oceanospirillaceae bacterium TaxID=1899355 RepID=A0A2E2KKK0_9GAMM)

HSP 1 Score: 155 bits (393), Expect = 8.110e-43
Identity = 79/162 (48.77%), Postives = 106/162 (65.43%), Query Frame = 1 
Query:  463 DCLLTRVQSRWPEARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVLEGRMAKTPKSGEVTAKLRPDTDNRPKQMFCEEKGNEAHTNWERIKWKEDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTPEGKAKSDRLLLHARRISFPH 948
            DCL  RVQ+ +P AR VHRLD  TSGL+V+ALT+EA R++ R F+ER   K Y A++ G+ ++  K G V   L  D +NRP Q+   E G  A T+W+        T V+ TP+TGR+HQ+R+H   +GHP++GD  Y   + KA SDRLLLHA R+SFPH
Sbjct:   32 DCLWRRVQAEFPTARVVHRLDYATSGLMVLALTLEAQRDISRSFQERKTGKLYQAIISGKPSE--KQGSVDLPLICDWENRPLQIVDHEHGKNALTHWKATGEDSRGTRVELTPITGRSHQLRVHMQAMGHPIIGDRFYADEDSKALSDRLLLHAERLSFPH 191
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BLAST of mRNA_Ecto-sp13_S_contig11.875.1 vs. uniprot
Match: A0A8A4TYK2_9BACT (Pseudouridine synthase n=1 Tax=Sulfidibacter corallicola TaxID=2818388 RepID=A0A8A4TYK2_9BACT)

HSP 1 Score: 156 bits (394), Expect = 8.410e-43
Identity = 80/162 (49.38%), Postives = 101/162 (62.35%), Query Frame = 1 
Query:  463 DCLLTRVQSRWPEARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVLEGRMAKTPKSGEVTAKLRPDTDNRPKQMFCEEKGNEAHTNWERIKWKEDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTPEGKAKSDRLLLHARRISFPH 948
            D L +R Q   PEAR VHRLD +TSG+ VMAL  ++ RE+ RQF +R   KTY A+  G M    + GEV   L  D  NRP+QM   E G +A T W  I  + DRTWV  TP+TGR+HQ+R+H   +GHP++GD LY  PE    + RLLLHA  +SF H
Sbjct:   45 DSLASRAQQLEPEARTVHRLDCETSGVTVMALDADSHRELSRQFHDREVLKTYVAICAGMMET--EQGEVNLPLVCDWPNRPRQMVDHENGKQAQTFWRVIHREPDRTWVQLTPITGRSHQLRVHLREIGHPILGDRLYAPPEVMRMAPRLLLHAEMLSFSH 204
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BLAST of mRNA_Ecto-sp13_S_contig11.875.1 vs. uniprot
Match: UPI001E4AF6DC (RluA family pseudouridine synthase n=1 Tax=Amphritea pacifica TaxID=2811233 RepID=UPI001E4AF6DC)

HSP 1 Score: 155 bits (393), Expect = 9.670e-43
Identity = 77/162 (47.53%), Postives = 106/162 (65.43%), Query Frame = 1 
Query:  463 DCLLTRVQSRWPEARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVLEGRMAKTPKSGEVTAKLRPDTDNRPKQMFCEEKGNEAHTNWERIKWKEDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTPEGKAKSDRLLLHARRISFPH 948
            DCL  RVQ  +P AR VHRLD  TSG++V+AL   + R +  QF+ER   K+Y AV+ G++AK   SG +   LR D DNRP Q+   ++G  A T+W  I+  +D   V+ TP+TGR+HQ+R+H   LGHP++GD  Y TP    +S+RLLLHAR ++F H
Sbjct:   38 DCLWRRVQQHYPTARIVHRLDYATSGVMVLALNAASHRHLSIQFQERKTGKSYQAVVAGQLAKN--SGTINQPLRCDWDNRPLQIIDHQQGKSAQTHWRLIEPLDDACRVELTPITGRSHQLRVHMQFLGHPILGDRFYATPSQIERSERLLLHARSLTFSH 197
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11.875.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4R0_ECTSI4.900e-21794.32Ribosomal large subunit pseudouridine synthase A n... [more]
UPI001C07D4FB6.210e-4445.20RluA family pseudouridine synthase n=1 Tax=Amphrit... [more]
UPI0019D3727C8.080e-4446.91pseudouridine synthase n=1 Tax=Parahaliea mediterr... [more]
A0A1Q8FZ42_9PROT1.210e-4347.53Pseudouridine synthase n=2 Tax=Maricaulis TaxID=74... [more]
A0A1H9I0B1_9GAMM1.740e-4346.67Pseudouridine synthase n=1 Tax=Amphritea atlantica... [more]
A0A136HHU2_9GAMM3.350e-4348.50RNA pseudouridine synthase n=2 Tax=Neptuniibacter ... [more]
A0A6P2AHX5_9BACT6.470e-4347.90RluA family pseudouridine synthase n=1 Tax=Phycisp... [more]
A0A2E2KKK0_9GAMM8.110e-4348.77RNA pseudouridine synthase n=1 Tax=Oceanospirillac... [more]
A0A8A4TYK2_9BACT8.410e-4349.38Pseudouridine synthase n=1 Tax=Sulfidibacter coral... [more]
UPI001E4AF6DC9.670e-4347.53RluA family pseudouridine synthase n=1 Tax=Amphrit... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11contigEcto-sp13_S_contig11:29752..33550 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score606.3
Seed ortholog evalue8.3e-171
Seed eggNOG ortholog2880.D7G4R0
Model size966
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.pseudouridine synthase activity
EggNOG OGsCOG0564@1,KOG1919@2759
Ec32 ortholog descriptionPseudouridine synthase, RsuA/RluB/C/D/E/F
Ec32 orthologEc-20_000700.1
Cds size966
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11.875.1prot_Ecto-sp13_S_contig11.875.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig11 29752..33550 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462568.278102-CDS-Ecto-sp13_S_contig11:29751..298921681462568.278102-CDS-Ecto-sp13_S_contig11:29751..29892Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11 29752..29892 -
1681462568.287648-CDS-Ecto-sp13_S_contig11:30335..304461681462568.287648-CDS-Ecto-sp13_S_contig11:30335..30446Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11 30336..30446 -
1681462568.2957363-CDS-Ecto-sp13_S_contig11:30795..309051681462568.2957363-CDS-Ecto-sp13_S_contig11:30795..30905Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11 30796..30905 -
1681462568.3046799-CDS-Ecto-sp13_S_contig11:31495..316081681462568.3046799-CDS-Ecto-sp13_S_contig11:31495..31608Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11 31496..31608 -
1681462568.3139184-CDS-Ecto-sp13_S_contig11:31979..321321681462568.3139184-CDS-Ecto-sp13_S_contig11:31979..32132Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11 31980..32132 -
1681462568.323637-CDS-Ecto-sp13_S_contig11:32427..325911681462568.323637-CDS-Ecto-sp13_S_contig11:32427..32591Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11 32428..32591 -
1681462568.3330042-CDS-Ecto-sp13_S_contig11:33376..335501681462568.3330042-CDS-Ecto-sp13_S_contig11:33376..33550Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11 33377..33550 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig11.875.1

>prot_Ecto-sp13_S_contig11.875.1 ID=prot_Ecto-sp13_S_contig11.875.1|Name=mRNA_Ecto-sp13_S_contig11.875.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=322bp
MSQKKCSKEEDSCNQHSNSDSGVDVIFSDTDMVVLNKPTGLRTVPGKAVG
PEAETRVHVEWHSGTKRQRQEFWTNVVHTACDSLLNDEKTEGEEEFRDHL
RRLTKENNVPRKRSKFHNYTAVTLGLEGEEGDMVSARLWDTVDGHLKKVV
GPGVDCLLTRVQSRWPEARHVHRLDQDTSGLVVMALTVEAAREMCRQFRE
RVPSKTYTAVLEGRMAKTPKSGEVTAKLRPDTDNRPKQMFCEEKGNEAHT
NWERIKWKEDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTPEGKA
KSDRLLLHARRISFPHVSEHP*
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mRNA from alignment at Ecto-sp13_S_contig11:29752..33550-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig11.875.1 ID=mRNA_Ecto-sp13_S_contig11.875.1|Name=mRNA_Ecto-sp13_S_contig11.875.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3799bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11:29752..33550- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCACAGAAGAAATGTTCGAAGGAGGAGGACAGCTGCAATCAACACAG
CAACAGTGATAGTGGTGTAGATGTTATTTTCAGCGATACCGACATGGTAG
TCCTCAACAAGCCTACAGGATTGAGAACTGTTCCAGGCAAGGCGGTCGGA
CCGGAGGCTGAGACGAGGGTGCATGTGAGAGAGGAGCGAGAGAGAGAGGG
AGAGAGCATTTCGTAGTCTTCGTTGCTCGTGACTGCTGCTGACATCGATA
AGGCGAAAGAGGGTAGATGAAAATACATACATTGTGCTGTAAGACGAGTT
GGAGCCTTTCGCTGATCCCCCCCGATGTTTAACATGGCCACAGCCGGGGT
TGCTTGGCGCGTCGTGAGTCGTGAGCGATGTGGAGATACATGTGCAGATA
TGTGGGGTGCGAGAGGATCCCCAGCTTCATTATTGGGAACACCGATCAAG
GCAACTTGGATCGATCCGCTCCTGCTAACTGCTTGCGGTCCACTGGTTTG
CCTGTACTCATGCTGAGGTGCTGAGCGACGTTGCTGTTGTGGCACCGAAG
GACTTGCTCTGCCGGCTGCCTGGGTTTGACGAGTGACTGCTGCTGTACAG
CACTTATGTTGCACGTTAGCACATTATTATACTAAGAATAAGAAATAGCT
TCGTGTGCTGCAACATTGCTGGACTCGCTCAGTCGGCGACTTCTTCTCTT
GGGCATGTGGATAACAACCGAAACTATGTACGCAAGTTGCGACAGTCATG
AAGTCTAGACAGCGAACTTACCTATCCAAACTCATGTTTAGCGGCATATC
ATGAAACGCTGTGTTCCGGTATGTGTGTGTGTTTCCATCCTTTTTTTTCT
GGGCTCCAGTCTTCGCCCTTCCATAATATGTTGATGCACTAGTCTAAATC
ACATCGAAAAAGAATTTACAAGAGGGTGCACTGCTGTGTTTTTGCGTGAC
ACACAACAGGTGGAGTGGCACAGCGGAACCAAGAGGCAAAGGCAGGAGTT
TTGGACGAACGTTGTACACACTGCATGCGATTCACTTCTTAACGACGAGA
AGACCGAGGGCGAAGAGGAGTTCCGCGATCACCTGCGCCGTCTGACGAAG
GAAAACAACGTCCCGAGGAAAAGGTGAAATACGTTTGTGGTTCCTCTGCC
TCATTGATCAAGGTCGACGACATCGTAACGGGCAGGACGAGTTTTTATTC
GAAACGGGAAGGTCGTGAGGTTTGGTTTACTTTGCCTTTCCTCCTTAAGG
CTCGGACGATGTTGGTAGTGCTGCTTCAGCTGCCTGTATACTCGCTTTAT
GTTTCGACCAGGGAAAGTCGAGGGGTGGCAAAGATGATGCAGCCGAGACG
GCGGCAGGGGCTGGACACCGACTCTCCCCTTGATCGTCGCCCCCTCGCTT
CTACGATCTGCCCCGCAGAAGCAAATTTCACAACTACACGGCGGTGACTC
TCGGTCTGGAAGGGGAGGAAGGGGATATGGTGTCCGCTCGTCTGTGGGAC
ACCGTCGACGGTCACCTCAAGAAAGTGGTCGGACCCGGAGTGGACTGCCT
CTTGACGCGGGTGCAATCCAGGTATGCTGGCGTCTGTCGATCCAACAAAA
GTGCCCGGCCAGGCGCCGCACGCTTCGGCCGGTCGGTTTGCGCCGTAAGA
TGGCATGAAGGGGACAAGTGGGGAGCTAGACGGAGATCTAGCAGCGAGCG
ATATTGCACGTATTCTGACGATTTCACCCCAAGCGTTTTTGTTCGTGGGT
TGTTGTGCTGGGCGCAAGAATGGACGAGCTCCGTACGAACCGCAGCGCGG
GATACTAGCACACTGTTGTGGGAGGTCTCCGGCACTAATTATTTCATTGA
TAAGTGTGGTGTCGATAGCAGCTCTCTCTATTTTTATCACAAGCGTAAGC
GTGCTTCTGTCCACGTGACACCCGCGGCTTATATGTGCCTAGGTGGCCCG
AGGCCCGGCATGTCCATCGTCTGGACCAAGACACTTCGGGGCTGGTTGTA
ATGGCTCTGACGGTAGAGGCGGCGAGGGAGATGTGTCGGCAGTTCCGCGA
GCGGGGTGAGTTATCTGCGTGCCTTGGGGGCGGGAAGGGTTTATTTACTC
GCGGCGGATCGATCGGTCTGGCCGTGGCATGGCGTGTCCTTCTCAACACA
CAAGAAGATGTCTTGTCTTTTCGTGAAGGCCTTGTAGGAAATCGATTTCG
GAGTGGCGTTGCTGTGGTTGACCGCCAATCAACGTGTTTCACAAGGTGCT
CCACGTTAGATCAAAGGAGTGATAGTAGCGGAACCACGGGAGGCACACAC
AGAGGGAAGGAGGGCTGCCGGCAACGCTGGTTGGATGCAGTATGTACGTG
ATGTTGCTGACAGGTTAGCACGGTCTCGAGGGAAGTACACGCAGACCAGG
CTGATGTTCTCGTGGACTTCAGCCGGATTGGAAAATATGTTGTTGAAAGT
CAACGTTCTGGTCGACACAATCGTTTTTTGGCGGAGACGAGCGACGGCCG
CCTCCTGTCAATGCTAGGGGTATGCAATACGTGCGCGGAGACAATGACTT
ACCCGTTTTCCTTCTTTTTCCGCACGAACGCACACGATCATTTATCACTT
TGCTGTTCCGGCGGGTCTATCGTCGCTGTCGATCTCGCGCGGCAGTTCCT
TCCAAGACGTACACCGCGGTATTGGAAGGGAGGATGGCCAAAACGCCCAA
GAGCGGCGAAGTCACGGCCAAGCTGCGGCCTGATACCGATAATCGGCCTA
AACAGGTGAACAGCATACATACGCGTGAGACTTACTCGATGTGGCGCGAG
AAAGTTCGGCAAATCCTTTTGGCTTCTTATGGAGTCGAAGATACCCCCAC
AGAAAACTCGCGGCAACAGCTTGTTGCGCAGCGGACAACCCGTTGCAGCG
CCATTTTTTTTCGTTTCCTCGGCGGGGTGCACACCCAATACATTGCATGA
CTTCGTGGTTTGTGCCGTCCCATGGCATCGACTGAACCCGTGTACGGCTA
GATATCCCACTTTTTTCTTGAAGATTCCGTATTTCTACATAAGAGCACCA
ATAGCATCGCTTCCTCTCTTGCCGCTGTGTTCTTGGTTCTCATGGTGGCC
GCAGATGTTCTGCGAAGAGAAGGGGAACGAGGCGCACACGAATTGGGAGC
GGATAAAATGGAAGGAGGACCGGACATGGGTGGACTTTACACCGGTAACG
GGCAGGACCCACCAGGTGCGCCCTTGCTGTGAGATTTGCATGGGCAGAAC
GGTAGCCCAAGATTCCATTGTGTTTCGCGGAGGAAGTGTGAAATGTGTGT
ATTTTTATGATTGGCATCGACCGCGCTAACGGGCTGACCAATTGTGTGTG
TGTGTTAGCATCCCAGCTGATCTGGGCCCCAGACTACAGCTTTCGGTATG
TTTGGACGCGCCAGCCAGTCGGGGTGACACAGGGGAAAGGCATTGAGTGT
TGGTTTGCTCACATGCACCAACAATCCAGGGGCACACAGGACTGCTTGCT
GAAACAGAAAGACAGGAAAAGTTGGGGGAAACGTTCGGGGGCCTATAGGG
TTGTCACCAATTAATCTGTGGCGACACCCGAACGCGGTTGCAGCAGTGGT
TGAACATTGTGTCTTTTTTCGTGGTGCCTCTCGCGGCTGTGTTTTATCTA
TCGATCAGATCCGGATGCACGCTGTGCACCTCGGCCATCCGGTGATGGGA
GACTCCTTGTACGGCACACCCGAAGGAAAGGCCAAGTCGGACAGGCTGCT
GCTTCACGCGAGGAGGATATCCTTCCCACACGTGAGTGAGCACCCGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11:29752..33550-

>mRNA_Ecto-sp13_S_contig11.875.1 ID=mRNA_Ecto-sp13_S_contig11.875.1|Name=mRNA_Ecto-sp13_S_contig11.875.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=966bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11:29752..33550- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCACAGAAGAAATGTTCGAAGGAGGAGGACAGCTGCAATCAACACAG
CAACAGTGATAGTGGTGTAGATGTTATTTTCAGCGATACCGACATGGTAG
TCCTCAACAAGCCTACAGGATTGAGAACTGTTCCAGGCAAGGCGGTCGGA
CCGGAGGCTGAGACGAGGGTGCATGTGGAGTGGCACAGCGGAACCAAGAG
GCAAAGGCAGGAGTTTTGGACGAACGTTGTACACACTGCATGCGATTCAC
TTCTTAACGACGAGAAGACCGAGGGCGAAGAGGAGTTCCGCGATCACCTG
CGCCGTCTGACGAAGGAAAACAACGTCCCGAGGAAAAGAAGCAAATTTCA
CAACTACACGGCGGTGACTCTCGGTCTGGAAGGGGAGGAAGGGGATATGG
TGTCCGCTCGTCTGTGGGACACCGTCGACGGTCACCTCAAGAAAGTGGTC
GGACCCGGAGTGGACTGCCTCTTGACGCGGGTGCAATCCAGGTGGCCCGA
GGCCCGGCATGTCCATCGTCTGGACCAAGACACTTCGGGGCTGGTTGTAA
TGGCTCTGACGGTAGAGGCGGCGAGGGAGATGTGTCGGCAGTTCCGCGAG
CGGGTTCCTTCCAAGACGTACACCGCGGTATTGGAAGGGAGGATGGCCAA
AACGCCCAAGAGCGGCGAAGTCACGGCCAAGCTGCGGCCTGATACCGATA
ATCGGCCTAAACAGATGTTCTGCGAAGAGAAGGGGAACGAGGCGCACACG
AATTGGGAGCGGATAAAATGGAAGGAGGACCGGACATGGGTGGACTTTAC
ACCGGTAACGGGCAGGACCCACCAGATCCGGATGCACGCTGTGCACCTCG
GCCATCCGGTGATGGGAGACTCCTTGTACGGCACACCCGAAGGAAAGGCC
AAGTCGGACAGGCTGCTGCTTCACGCGAGGAGGATATCCTTCCCACACGT
GAGTGAGCACCCGTGA
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