prot_Ecto-sp13_S_contig10916.817.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10916.817.1 vs. uniprot
Match: D8LTZ2_ECTSI (DNA polymerase alpha subunit B n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTZ2_ECTSI) HSP 1 Score: 961 bits (2485), Expect = 0.000e+0 Identity = 522/577 (90.47%), Postives = 526/577 (91.16%), Query Frame = 0
Query: 1 MSSWAGFETEVAKSKAAASTP-TASAGTXXXXXXXXXXXXXXXXXXXXXXXXAGRRVVNTVTSEDLASSGTKRPMLPFSSPDPKARSKLARQDGVGGDGASLSPTSVQSPPDLVRAVYSSRKNAGQKTTSYNPALGLRGLSVAPSPRQAGTRCDVVVDGAVGAPARYRYMYTPLEERAAALEKGLVALQGQMERRFGLTEITPVGVPRQEQVVTVGRVCCESTEGKINRASILLEXXXXXXXXXXXXXXXXXXXXXALFPGQVVAVQGVNGSGGRMVARGIIDGVPRPLPSSRPSDLLRVQHGADLGGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMGPFVDAEHPKVASGDATIECVDGGSESVDFETLFRLRLSEKLDTLFADDRDLPTQFVLVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLDVPKTGVRTTSXXXXXXXXXXXXRQKRVHLAPNPAWLRVNEVTIGVSSTDALFDLSGDEVSAGGKGTNRLARLAGHLLQQQSFYPLFPPPAGSAAQLDMRHAHRWGMPATPDVLLVPSRLAQFARQVQ 576
MSSWAGFETEVAKSKAAASTP AS GT XXXXXX XXXXXXXXX AGRRVVNTVTSEDLASSGTKRPMLPFSSP+PKARSKLARQDG GGDGASLSPTSVQSPPDLVRAVYSSRKNAGQKT SYNPALGLRGLSVAPSPRQAGTRCDVVVDGAVGAPARYRYMYTPLEERAAALEKGLVALQGQMER+FGLTEITPVGVPRQEQVV VGRVCCESTEGKINRASILLE ALFPGQVVAVQGVNGSGGRMVARGIIDGVPRPLPSSRPSDLLR QHGA+LGGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMGPFVD+EHPKVASGDATIECVDGGSESVDFETLFRLRLSEKLD LFADDRDLPTQFVLVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLDVPKTG RTTS RQKRVHLAPNPAWLRVNEVTIGVSSTDALFDLSGDEVSAGGKGTNRLARLAGHLLQQQSFYPLFPPPAGSAAQLDMRHAHRWGMPATPDVLLVPSRLAQFARQVQ
Sbjct: 61 MSSWAGFETEVAKSKAAASTPPAASTGTASXXXXXXRXXXXXXXXXIVTPRPAGRRVVNTVTSEDLASSGTKRPMLPFSSPNPKARSKLARQDGEGGDGASLSPTSVQSPPDLVRAVYSSRKNAGQKTASYNPALGLRGLSVAPSPRQAGTRCDVVVDGAVGAPARYRYMYTPLEERAAALEKGLVALQGQMERKFGLTEITPVGVPRQEQVVAVGRVCCESTEGKINRASILLEGSRRDSSGQRAHLDLRELQSFALFPGQVVAVQGVNGSGGRMVARGIIDGVPRPLPSSRPSDLLRAQHGAELGGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMGPFVDSEHPKVASGDATIECVDGGSESVDFETLFRLRLSEKLDKLFADDRDLPTQFVLVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLDVPKTGARTTSGGASAAAAA---RQKRVHLAPNPAWLRVNEVTIGVSSTDALFDLSGDEVSAGGKGTNRLARLAGHLLQQQSFYPLFPPPAGSAAQLDMRHAHRWGMPATPDVLLVPSRLAQFARQVQ 634
BLAST of mRNA_Ecto-sp13_S_contig10916.817.1 vs. uniprot
Match: W7TPC9_9STRA (DNA polymerase alpha subunit B n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPC9_9STRA) HSP 1 Score: 364 bits (934), Expect = 2.540e-114 Identity = 218/462 (47.19%), Postives = 275/462 (59.52%), Query Frame = 0
Query: 117 YSSRKNAGQKTTSYNPALGLRGLSVAPSPRQAGTRCDVVVDGAVGAPARYRYMYTPLEERAAALEKGLVALQGQMERRFGL---TEITPVGVPRQEQVVTVGRVCCESTEGKINRASILLEXXXXXXXXXXXXXXXXXXXXXALFPGQVVAVQGVNGSGGRMVARGIIDGVPRPLPSSRPSDLLRVQHGADLGGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMGPFVDAEHPKVASGDATIECVDGGSESVDFETLFRLRLSEKLDTLFADDRDLPTQFVLVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLDVPKTGVRTTSXXXXXXXXXXXXRQKRVHLAPNPAWLRVNEVTIGVSSTDALFDLSGDEVSAGGKGTNRLARLAGHLLQQQSFYPLFPPPAGSAAQLDMRHAHRWGMPATPDVLLVPSRLAQFARQV 575
Y +R NAGQK + AL + P+RYR+MYT LEERA A EK L+ LQ + R GL E+TPVGVP+QE V +GRVCCE+ EG+IN+AS+LLE +LFPGQVVAV+GVN SG +MV R II+G+PRP +S +L QH + GG ALS+ AAGP+TT+DSL YEPL DLL + A +PDV VL GPFVDA HP+VASG+ I ESVDFE+LF++R+S L+ L+ + L ++ VLVPSL DVFH+ PP DR+ GGV + EER+ L +P + + KR++ NP++ VNEV +GV++ D L LSGDEVS NRLARLA HLLQQQSF+PLFPPPA AQLD+RHA MP TPDVLL+PS+L F + V
Sbjct: 206 YLNRTNAGQKAGTLPGALD------------------------INLPSRYRFMYTTLEERARAQEKMLLRLQDDLVAR-GLEAEAEVTPVGVPKQETVTVIGRVCCEAPEGRINKASVLLEGSRRDSGGFRVKLELGQLPAFSLFPGQVVAVEGVNSSGFKMVVRRIIEGIPRPFLTSPAKKMLEFQHDSLYQGGGALSLLVAAGPYTTTDSLEYEPLEDLLKVIAARQPDVAVLCGPFVDANHPQVASGETEIAGAGEEKESVDFESLFKMRVSLFLEGLYDTNPTLASRIVLVPSLNDVFHD----HPPLADRIPGGVPSPW--FEEERLGDLGLPFASEKDGA-------------DKRLYCLSNPSFFTVNEVAVGVTTNDILCHLSGDEVSY--NPGNRLARLAAHLLQQQSFFPLFPPPADGQAQLDLRHADHLRMPITPDVLLLPSKLTPFVKDV 621
BLAST of mRNA_Ecto-sp13_S_contig10916.817.1 vs. uniprot
Match: A0A836CA88_9STRA (DNA polymerase alpha subunit B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA88_9STRA) HSP 1 Score: 359 bits (921), Expect = 3.990e-112 Identity = 233/546 (42.67%), Postives = 284/546 (52.01%), Query Frame = 0
Query: 68 SGTKRPMLPFSSPDPKARSKLARQDGVGGDGASLSPTSVQSPPDLVR--------------------AVYSSRKNAGQKTTSYNPALGLRGLSVAPSPRQAGT-----RCDVVVDGAVGAPARYRYMYTPLEERAAALEKGLVALQGQMERRFGLTEITPVGVPRQEQVVTVGRVCCESTEGKINRASILLEXXXXXXXXXXXXXXXXXXXXXALFPGQVVAVQGVNGSGGRMVARGIIDGVPRPLPSSRPSDLLRVQHGADLGGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMGPFVDAEHPKVASGDATIECVDGG---------SESVDFETLFRLRLSEKLDTLFADDRDLPTQFVLVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLDVPKTGVRTTSXXXXXXXXXXXXRQKRVHLAPNPAWLRVNEVTIGVSSTDALFDLSGDEVSAGGKGTNRLARLAGHLLQQQSFYPLFPPPAGSAAQLDMRHAHRWGMP---ATPDVLLVPSRLAQFARQVQ 576
S KRP+ SP +K AR G GG + SVQ P R A Y+ R NAG + YNP+ + ++A RC V VGA ARYRYM+ PLEER+ E L+A ++ R L E+TPVGVPRQE+V VGRV CES EG++ RAS LLE ALFPGQ+VA +G+N G RM RG++ G P P P+ AAGP+TT D+L YEPLNDLL V+ RPDVVVLMGPFVDAEHP +A+G A + V GG +E VDFETLFRLR+ +KL+ + AD PTQFVL+PS RD FH+ YPQPPF D V GG LG+G Y ++ ++ L +P R RV PNPA V +S D+LFDLS +E + G G RLARLA HLLQQ+SFYPL P AG LD R A + A PDVLL+P RLAQFAR V+
Sbjct: 127 SHLKRPLPGLMSPPGSTVNKAART-GAGGFSSPAPSLSVQQTPVAARSGGGXXXXXXXXXXAAHMPQAAYADRANAGARVLEYNPSKLMHAGAIAAXXXXXXXXXXRQRCSVEPICGVGAAARYRYMFAPLEERSRLQEAALLAATAELARAHALGELTPVGVPRQEEVTVVGRVVCESGEGRMGRASALLEGSWRDSGGARAALALDALPSFALFPGQIVAARGINSGGMRMAVRGLLPGSPAP-----PAXXXXXXXXXXXXXXXXXXXXVAAGPYTTDDNLEYEPLNDLLAHVQETRPDVVVLMGPFVDAEHPLIAAGAAALP-VPGGXXXXXXXDAAEPVDFETLFRLRVCDKLERVLADPAH-PTQFVLIPSTRDAFHDATYPQPPFADAVAGGAPLGIGEYADDAVYTLGLP--------------------RDARVACLPNPAAFAVGGAVFAATSADSLFDLSCEEAAGGAGGAPRLARLADHLLQQRSFYPLRPARAG--VPLDPRRAAALALAPRGAAPDVLLLPGRLAQFARDVR 642
BLAST of mRNA_Ecto-sp13_S_contig10916.817.1 vs. uniprot
Match: A0A7S2ERG3_9STRA (DNA polymerase alpha subunit B n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ERG3_9STRA) HSP 1 Score: 296 bits (757), Expect = 3.470e-88 Identity = 193/537 (35.94%), Postives = 273/537 (50.84%), Query Frame = 0
Query: 76 PFSSPDPKARSKLARQDGVGGDGASLSPTSVQ------SPPDLVRAV----YSSRKNAGQKTTSYNPALGLRGLSVAPSPRQAGTRCDVVVDGAVGAPARYRYMYTPLEERAAALEKGLVALQGQMERRF--------------GLTEITPVGVPRQEQVVTVGRVCCESTEGKINRASILLEXXXXXXXXXXXXXXXXXXXXX--------ALFPGQVVAVQGVNGSGGRMVARGIIDGVPRPLPSSRPSDLLRVQHGADLGGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMGPFVDAEHPKVASGDATIECVDGGSESVDFETLFRLRLSEKLDTLFADDRDLPTQFVLVPSLRDVFHEFVYPQPPFHDRV-EGGVELGVGAYPEERMFVLDVPKTGVRTTSXXXXXXXXXXXXRQKRVHLAPNPAWLRVNEVTIGVSSTDALFDLSGDEVSAGGKGTNRLARLAGHLLQQQSFYPLFPPPAGSA----AQLDMRHAHRWGMPATPDVLLVPSRLAQFARQV 575
P +P PK R +++ V S+SP + +P +++ Y RKNAG SYNP L LS + +P + + R+M+T ++RA AL K LV +++ + L + VGVPRQE+V +GR+C E+ EGK+NR S+LLE +LFPGQ+VAV+G+N SG ++VA + +G P ++ G + I AGP+TT D+L Y PL+DLL +R +PDVV+L GPFVD +HP V SG+ I+ +G + E LF R+S L+ LF D+ L TQFVLVP L D EFVYPQPP DR+ +GG +L + + +D G+ KR+H PNP LR+NEVTIG++STD LF ++ DE + +RLARL HL+QQQS+YPL+PPP +A LD++ +W M PD+L+VPS+L FAR+V
Sbjct: 108 PSQTPPPKQRRVEIKEEEVT-PRVSVSPLKSKLSPVPPTPSSILKGANTPKYEERKNAGATVASYNPH-SLTPLSSSSAPHIFYKHVE-----------KCRFMFTTPQDRANALNKRLVEFGKRIQEVYDIKDMYDVEEDQEVALARLENVGVPRQEKVCCIGRICNEAHEGKLNRTSLLLEGSRHQSNGMRVNLDISPLLDANLETRSSFSLFPGQIVAVEGINASGRKLVAHKLCEGAAPPKAVLTAGEMKEFYKSEKEG----MKIMTCAGPYTTMDNLEYNPLSDLLQQIREEQPDVVILTGPFVDIKHPLVQSGNVEIDVGEGNMSKIPHEALFAQRISALLEQLFEDEEGLGTQFVLVPHLDDAVAEFVYPQPPLSDRLPKGGKQLNLSSAE-----AIDFGSLGLHHIESANRQPGQSTTP--KRIHCVPNPCTLRINEVTIGITSTDVLFHMNCDEANGNLPPGSRLARLTQHLIQQQSYYPLYPPPVSNARNSSVNLDLKQMEKWSMECQPDILIVPSKLTTFARKV 620
BLAST of mRNA_Ecto-sp13_S_contig10916.817.1 vs. uniprot
Match: A0A7S2F9H8_9STRA (DNA polymerase alpha subunit B n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2F9H8_9STRA) HSP 1 Score: 281 bits (719), Expect = 1.990e-86 Identity = 155/313 (49.52%), Postives = 203/313 (64.86%), Query Frame = 0
Query: 266 QGVNGSGGRMVARGIIDGVPRPLPSSRPSDLLRVQHGADLGGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMGPFVDAEHPKVASGDATIECVDGGSESVDFETLFRLRLSEKLDTLFADDRDLPTQFVLVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLDVPKTGVRTTSXXXXXXXXXXXXRQKRVHLAPNPAWLRVNEVTIGVSSTDALFDLSGDEVSAGGKGTNRLARLAGHLLQQQSFYPLFPPPAGSAAQ---LDMRHAHRWGMPATPDVLLVPSRLAQFARQV 575
+G+N SG RMV + + +GVPRPLP S P +L+++ HG G + LSI AAGPF T+D+L YEPL+DLL + A DV+VL GPFVD HPK++ GD IE DG ESVD++T F ++S L+TL+ ++ D Q VLVPSL D H++V+PQPPF DRVEGG + +PEE++F LD+P TG KRVH NPA ++VNEV +GV+STD L L E++ +NRL RLA HLL+QQSF+PLFP G A + +DM + R MP +PDVLLVPSRLA FAR++
Sbjct: 1 EGINSSGTRMVVKNLCEGVPRPLPRSAPDELMKLHHGV---GSQPLSIAVAAGPFCTNDNLDYEPLSDLLHS--AKHNDVLVLCGPFVDVNHPKLSGGDVDIETEDG-VESVDYDTFFNFKISGVLETLYEENPDTKLQVVLVPSLHDAHHDYVFPQPPFADRVEGGQQSPF--FPEEKLFTLDIPHTG-------------GLGEDSKRVHCVSNPAMIKVNEVVVGVTSTDVLMQLGKAEIAQRPMSSNRLGRLAEHLLKQQSFHPLFPANGGVAGEPVPVDMTKSDRLRMPMSPDVLLVPSRLATFARKL 292
BLAST of mRNA_Ecto-sp13_S_contig10916.817.1 vs. uniprot
Match: B8BYS5_THAPS (DNA polymerase alpha subunit B n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BYS5_THAPS) HSP 1 Score: 291 bits (746), Expect = 3.540e-86 Identity = 187/530 (35.28%), Postives = 269/530 (50.75%), Query Frame = 0
Query: 80 PDPKARSKLARQDGVGGDGASLSPTSVQSPPDLVRAVYSSRKNAGQKTTSYNPALGLRGLSVAPSPRQAGTRCDVVVDGAVGAPARYRYMYTPLEERAAALEKGLVALQGQMERRFGL--------------TEI--------TPVGVPRQEQVVTVGRVCCESTEGKINRASILLEXXXXXXXXXXXXXXXXXXXXX-------ALFPGQVVAVQGVNGSGGRMVARGIIDGVPRPLPSSRPSDLLRVQHGADLGGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMGPFVDAEHPKVASGDATIECVDGGSESVDFETLFRLRLSEKLDTLFADDRDLPTQFVLVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEE-----RMFVLDVPKTGVRTTSXXXXXXXXXXXXRQKRVHLAPNPAWLRVNEVTIGVSSTDALFDLSGDEVSAGGKGTNRLARLAGHLLQQQSFYPLFPPPAGSAAQLDMRHAHRWGMPATPDVLLVPSRLAQFARQV 575
P K+ K + G G S +P S L AV + +NA TT + S P P T +R+M+TPL RA ALE ++ + + ++ + E+ TPVG+P+Q +VV VGR+C E+ EG++NRASI LE + FPGQ+VAV+G+N SG M A + +GVP P+ S +L++ +G D G LSI + GPFTT D+L Y+PL D++ + +PDVV++ GPFVD P V G+ TI DG + V +E LF+ + + L+ ++A+D D+ TQFVLVPS D+ E VYPQPP V V GV + +E +V + ++T+ R KRVH NP L++NE+++GV+S+D LF +S DE +A RL R+A HL+QQ+S+YPLFP A A LD+ + W MP PD+L+VPS+L FAR+V
Sbjct: 170 PTAKSAPKYQDRTGTGSLVTSYNPNS------LPTAVEVNAQNADNATTQKTCTIQYHPSSTHPQPPTKSTP--------------FRHMFTPLATRAKALESRILTMSDSICEKYNIKSEEEEMLKYEHVSAEVVDDNMACWTPVGIPKQGKVVCVGRICNEAHEGRLNRASIRLEGSRKDSSGSRIHLDLNSLVTNNDNNQSYSFFPGQIVAVEGINSSGRTMQASRLYEGVPPPVEKSTAKELIKYNYGPDGQNGMPLSIVSMCGPFTTKDNLEYDPLVDMVMKISEDQPDVVIMCGPFVDGRQPLVQGGEPTITDEDGNEKKVSYENLFQTKFAALLEEMYANDPDMKTQFVLVPSTEDMICESVYPQPPL---VNQEVTSGVKKFNDEFGNLGLNYVEIAGRENIKTSE------------RTKRVHCVSNPCTLKINELSVGVTSSDVLFHISSDETNANLPPGGRLTRIAQHLIQQRSYYPLFP--AAKGACLDLSRSDEWEMPVQPDILIVPSKLTTFARKV 662
BLAST of mRNA_Ecto-sp13_S_contig10916.817.1 vs. uniprot
Match: A0A1Z5K576_FISSO (DNA polymerase alpha subunit B n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K576_FISSO) HSP 1 Score: 280 bits (716), Expect = 2.490e-82 Identity = 165/418 (39.47%), Postives = 236/418 (56.46%), Query Frame = 0
Query: 166 YRYMYTPLEERAAALEKGLVALQGQMERRFGL---TEITP---VGVPRQEQVVTVGRVCCESTEGKINRASILLEXXXXXXXXXXXXXXXXXXXXX-ALFPGQVVAVQGVNGSGGRMVARGIIDGVPRPLPSSRPSDLLRVQHGADLGGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMGPFVDAEHPKVASGDATIECVDGGSESVDFETLFRLRLSEKLDTLFADDRDLPTQFVLVPSLRDVFHEFVYPQPPFHDRVEGGVELGV-GAYPEERMFVLDVPKTGVRTTSXXXXXXXXXXXXRQKRVHLAPNPAWLRVNEVTIGVSSTDALFDLSGDEVSAGGKGTNRLARLAGHLLQQQSFYPLFPPPAGSAAQLDMRHAHRWGMPATPDVLLVPSRLAQFARQV 575
YR ++T E+RA AL++ L+ + + ++ L E+ P VG+PR +QV +GR+C + GKIN S+LLE ++FPGQ+VA++G+N +G ++ + + +G +SR DL + A G+ + + AAGPFTTSD+ Y+P DLL V+ +PDVV+L GPFVD HP V SG ++ DG V +ET F ++S L+ L ++ L TQFVLVPSL D E+VYPQPPF DRV GG++ + GA G+ + KRVH PNP L++NEV IG++STD LF +S DE +A +RLAR++ HLLQQ+S+YPLFPP G +D ++ W MP PD+LL+PS+LA F+R V
Sbjct: 206 YRSLFTTTEQRATALDQQLIHMGQHLMEKYQLGQSDEVAPLEGVGIPRADQVCNIGRICNAAHYGKINATSVLLEGSRAAVGGARVAVDLSTLSSQYSVFPGQIVALEGMNPTGRKLQVQRLCEGAAAAPVTSRVRDLRQYHLQAQQ--GQPVKLLTAAGPFTTSDNFQYQPWQDLLHVVQNEQPDVVILTGPFVDMNHPAVQSGQTALQDEDGNDVIVPYETFFMHKISLLLEELLTENPLLMTQFVLVPSLEDATAEWVYPQPPFQDRVSGGLQPNIPGA-------------DGITIGTMGLDYVETATELPAKRVHCVPNPCTLQINEVVIGITSTDVLFHMSADETNANLPPGSRLARISQHLLQQRSYYPLFPPAPGM--NMDYQYMEYWSMPCQPDLLLLPSKLACFSRIV 606
BLAST of mRNA_Ecto-sp13_S_contig10916.817.1 vs. uniprot
Match: A0A1Z5KI39_FISSO (DNA polymerase alpha subunit B n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KI39_FISSO) HSP 1 Score: 279 bits (713), Expect = 3.860e-82 Identity = 189/511 (36.99%), Postives = 274/511 (53.62%), Query Frame = 0
Query: 75 LPFSSPDPKARSKLARQDGVGGDGASLSPTSVQSPPDLVRAV--YSSRKNAGQKTTSYNPALGLRGLSVAPSPRQAGTRCDVVVDG-AVGAPARYRYMYTPLEERAAALEKGLVALQGQMERRFGL---TEITP---VGVPRQEQVVTVGRVCCESTEGKINRASILLEXXXXXXXXXXXXXXXXXXXXXALFPGQVVAVQGVNGSGGRMVARGIIDGVPRPLPSSRPSDLLRVQHGADLGGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMGPFVDAEHPKVASGDATIECVDGGSESVDFETLFRLRLSEKLDTLFADDRDLPTQFVLVPSLRDVFHEFVYPQPPFHDRVEGGVELGV-GAYPEERMFVLDVPKTGVRTTSXXXXXXXXXXXXRQKRVHLAPNPAWLRVNEVTIGVSSTDALFDLSGDEVSAGGKGTNRLARLAGHLLQQQSFYPLFPPPAGSAAQLDMRHAHRWGMPATPDVLLVPSRLAQFARQV 575
LP +P P R +LA +SLSP PP ++ Y +R AGQ ++++ A R + P R +C + D + YR M+T E+RA AL + L+ + + ++ L ++ P VG+PR +QV VGR+C + GKIN S LLE ++FPGQ+VA++G+N +G ++ + + +G ++R S L Q+ G+ L + AAGPFTTSD+ Y+PL DLL V+ +PDVV+L GPFVD +HP V SG ++ +G V +ET F ++S L+ L + L TQFVLVPSL D E+VYPQPPF DRV GG++ + GA G+ + +RVH PNP L++NEV IG++STD LF +S DE +A +RLAR++ HLLQQ+S+YPLFPP G +D ++ +W MP PDVL++PS+LA F+R V
Sbjct: 98 LPHVTP-PAKRLQLAVATEPRRSSSSLSP----GPPVSLQPSDKYETRTGAGQIVSTFS-AKEKRTATYVPLSRP---KCAIRKDSFSTNLSHTYRSMFTTTEQRATALNQQLLEMTKHLIDKYQLGQSDQVAPLEGVGIPRADQVCNVGRICNAAHAGKINATSCLLEGSRAEGGVRVSLDWSGVSQY-SVFPGQIVALEGMNPTGRKLQVQRLCEGAAAAPVTTRRSALR--QYHLQAQEGQPLKLVTAAGPFTTSDNFHYQPLQDLLHVVQQEQPDVVILTGPFVDLDHPAVQSGQTILQDEEGNDVIVPYETFFVHKISLLLEELLTEHPMLMTQFVLVPSLEDATAEWVYPQPPFQDRVPGGLQPNIPGA-------------DGITIGTMGLDYVETATELPCQRVHCVPNPCTLQINEVVIGITSTDVLFHMSADETNANLPPGSRLARISQHLLQQRSYYPLFPPAPGM--NMDYQYMEQWSMPCQPDVLILPSKLACFSRTV 581
BLAST of mRNA_Ecto-sp13_S_contig10916.817.1 vs. uniprot
Match: A0A7S4EDL8_9STRA (DNA polymerase alpha subunit B n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EDL8_9STRA) HSP 1 Score: 273 bits (698), Expect = 1.190e-80 Identity = 196/554 (35.38%), Postives = 273/554 (49.28%), Query Frame = 0
Query: 59 TVTSEDLASSGTKRPML-PFSSPDPKARSKLARQDGVGGDGASLSPTSVQSPPDLVRAVYSSRKNAGQKTTSYNPALGLRG-------------LSVAPSPRQAGTRCDVVVDG-------AVGAPARYRYMYTPLEERAAALEKGLVALQGQMERRFGLTEITP--VGVPRQEQVVTVGRVCCESTEGKINRASILLEXXXXXXXXXXXXXXXXXXXXXALFPGQVVAVQG-VNGSGGRMVARGIIDGVPRPLPSSRPSDLLRVQHGADLGGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMGPFVDAEHPKVASGDATIECVDGGSESVDFETLFRLRLSEKLDTLFADDRDLPTQFVLVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLDVPKTGVRTTSXXXXXXXXXXXXRQ--KRVHLAPNPAWLRVNEVTIGVSSTDALFDLSGDEVSAGGKGTN------RLARLAGHLLQQQSFYPLFPPPAGSA----AQLDMRHAHRWGMPATPDVLLVPSRLAQFARQVQ 576
T S+ S KRP+ P +P P+ + A G+ + + TS + PP Y R N G N L R + AP+ + G AVG RYR+M+TP ER AAL+ LV ++ F ++ P +G Q + GRVC ++ +G++N++S+ LE ALFPGQVV V G G G ++AR II G P P P+S P+ ++ H + LSI+AA+GP+TTSD L Y PL DLL A RAA+PD VVL+GPFVDA+HP + D + G ESVD TLF L+++ L+ L ++ D PTQF+L P+ RD+ E V+PQPP LD P G + + + +VH+ NP ++NEV +GV++TD LF LS E+ G+ + R+ARLA HLL Q+SFYPLFPPP+ S+ A +D+R +W +P PDVL+ PS+L FAR VQ
Sbjct: 6 TPVSDAPPPSTLKRPLENPTVTPAPRKKVSFA------GETPTATETSPKPPPSTATK-YKDRTNGGATVDVANKHLQRRAAWGDLGSVSQRAVVVAAPTEKDVDAWTSSKAYGGTESTQLAVGTATRYRHMFTPPGERCAALDASLVEAAQKIRENFSEKDVEPCAIGTATQTPALFCGRVCLDALDGRLNKSSVCLEGERSEGGFRVPLDLTAVEGSYALFPGQVVGVVGSAPGEDGTILARSIILGSPAP-PASTPAKQMQEFHTKQQN-NQPLSIWAASGPYTTSDDLDYSPLKDLLAACRAAKPDAVVLLGPFVDADHPLAKNND-----LKEGDESVDAATLFVLKVAWALEKLVIEE-DCPTQFILAPATRDLVAEPVFPQPP-----------------------LDAPPLGAQNDARPSWQDEMPVGSLELPSQVHVVGNPGLFKINEVVVGVTATDVLFQLSSQELFHNGRDNSEIAKMPRVARLASHLLSQRSFYPLFPPPSMSSTVADAPVDLRQHGKWKLPLQPDVLITPSKLQPFARDVQ 521
BLAST of mRNA_Ecto-sp13_S_contig10916.817.1 vs. uniprot
Match: A0A7S2FH66_9STRA (DNA polymerase alpha subunit B n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FH66_9STRA) HSP 1 Score: 271 bits (694), Expect = 1.070e-79 Identity = 186/517 (35.98%), Postives = 268/517 (51.84%), Query Frame = 0
Query: 101 LSPTSVQSPPDLVRAV---------YSSRKNAGQKTTSY---------NPALGLRGLSVAPSPRQAGTRCDVVVDGAVGAPA--------------RYRYMYTPLEERAAALEKGLVALQGQMERRFGL---TEITPVGVPRQEQVVTVGRVCCEST-EGKINRASILLEXXXXXXXXXXXXXXXXXXXXXALFPGQVVAVQGVNGSGGRMVARGIIDGVPRPLPSSRPSDLLRVQHGADLGGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMGPFVDAEHPKVASGDATI--ECVDGGS---ESVDFETLFRLRLSEKLDTLFADDRDLPTQFVLVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLDVPKTGVRTTSXXXXXXXXXXXXRQKRVHLAPNPAWLRVNEVTIGVSSTDALFDLSGDEVSAGGKGTNRLARLAGHLLQQQSFYPLFPPPAGSAAQ----LDMRHAHRWGMPATPDVLLVPSRLAQFA 572
SP+S+Q+P + V Y++RKNAG T +P + G+S P C + V G G+PA YR+MYT + +RAA+L++ ++ ++ G + +PVGV Q+ VV GRVCC++ EGKIN+ SILLE ALFPGQ V V+G+N SG RMV + ++ GVPRPLP ++ + L + A+GPF +++L Y PL DLL + A DV++L GPFVD HP++ SG + + DG + ES+D+ LF L++++ L+ + Q V+VPSL D FH+ VYPQPP D+ GV+ +PEE+ F +++P + KR+HL NPA LR+NEV +G+SSTD L + E++ K RL RLA HL+ QQSF+PLFP G A LD+ + RW MP +PD+L++PS+LA FA
Sbjct: 64 FSPSSLQTPGQKIDIVSHPVTPSKSYATRKNAGDITLEMRAKIEVPTDSPGKEINGMSRQP--------CHINVFGEPGSPAPESDSSHESVGVASHYRHMYTTVMDRAASLQRSFDHMEQELLAHAGKEHSSRRSPVGVRSQDPVVCFGRVCCDTLGEGKINKTSILLEGGRMEGGQRIELKLQDLSSF-ALFPGQWVLVEGINSSGPRMVVKRLMTGVPRPLPQAQITKKRT----------SPLRLVVASGPFCCTNNLDYAPLKDLL--LNANSADVLILSGPFVDVAHPQLKSGVVLMAGDTDDGATCEMESLDYCNLFNLKVTQALEDMQDAHPSSTLQIVMVPSLADAFHDCVYPQPPLTDQSRKGVKSPW--FPEEKYFDVEIPFAAQTEVTG-------------KRMHLVSNPAMLRINEVVVGISSTDILMSMGRAEIAENPKNKQRLPRLAEHLVNQQSFFPLFPANGGVKANEDVPLDLSQSERWRMPVSPDILILPSKLATFA 544 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10916.817.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig10916.817.1 ID=prot_Ecto-sp13_S_contig10916.817.1|Name=mRNA_Ecto-sp13_S_contig10916.817.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=576bpback to top |