prot_Ecto-sp13_S_contig10916.817.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10916.817.1
Unique Nameprot_Ecto-sp13_S_contig10916.817.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length576
Homology
BLAST of mRNA_Ecto-sp13_S_contig10916.817.1 vs. uniprot
Match: D8LTZ2_ECTSI (DNA polymerase alpha subunit B n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTZ2_ECTSI)

HSP 1 Score: 961 bits (2485), Expect = 0.000e+0
Identity = 522/577 (90.47%), Postives = 526/577 (91.16%), Query Frame = 0
Query:    1 MSSWAGFETEVAKSKAAASTP-TASAGTXXXXXXXXXXXXXXXXXXXXXXXXAGRRVVNTVTSEDLASSGTKRPMLPFSSPDPKARSKLARQDGVGGDGASLSPTSVQSPPDLVRAVYSSRKNAGQKTTSYNPALGLRGLSVAPSPRQAGTRCDVVVDGAVGAPARYRYMYTPLEERAAALEKGLVALQGQMERRFGLTEITPVGVPRQEQVVTVGRVCCESTEGKINRASILLEXXXXXXXXXXXXXXXXXXXXXALFPGQVVAVQGVNGSGGRMVARGIIDGVPRPLPSSRPSDLLRVQHGADLGGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMGPFVDAEHPKVASGDATIECVDGGSESVDFETLFRLRLSEKLDTLFADDRDLPTQFVLVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLDVPKTGVRTTSXXXXXXXXXXXXRQKRVHLAPNPAWLRVNEVTIGVSSTDALFDLSGDEVSAGGKGTNRLARLAGHLLQQQSFYPLFPPPAGSAAQLDMRHAHRWGMPATPDVLLVPSRLAQFARQVQ 576
            MSSWAGFETEVAKSKAAASTP  AS GT  XXXXXX XXXXXXXXX      AGRRVVNTVTSEDLASSGTKRPMLPFSSP+PKARSKLARQDG GGDGASLSPTSVQSPPDLVRAVYSSRKNAGQKT SYNPALGLRGLSVAPSPRQAGTRCDVVVDGAVGAPARYRYMYTPLEERAAALEKGLVALQGQMER+FGLTEITPVGVPRQEQVV VGRVCCESTEGKINRASILLE                     ALFPGQVVAVQGVNGSGGRMVARGIIDGVPRPLPSSRPSDLLR QHGA+LGGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMGPFVD+EHPKVASGDATIECVDGGSESVDFETLFRLRLSEKLD LFADDRDLPTQFVLVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLDVPKTG RTTS            RQKRVHLAPNPAWLRVNEVTIGVSSTDALFDLSGDEVSAGGKGTNRLARLAGHLLQQQSFYPLFPPPAGSAAQLDMRHAHRWGMPATPDVLLVPSRLAQFARQVQ
Sbjct:   61 MSSWAGFETEVAKSKAAASTPPAASTGTASXXXXXXRXXXXXXXXXIVTPRPAGRRVVNTVTSEDLASSGTKRPMLPFSSPNPKARSKLARQDGEGGDGASLSPTSVQSPPDLVRAVYSSRKNAGQKTASYNPALGLRGLSVAPSPRQAGTRCDVVVDGAVGAPARYRYMYTPLEERAAALEKGLVALQGQMERKFGLTEITPVGVPRQEQVVAVGRVCCESTEGKINRASILLEGSRRDSSGQRAHLDLRELQSFALFPGQVVAVQGVNGSGGRMVARGIIDGVPRPLPSSRPSDLLRAQHGAELGGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMGPFVDSEHPKVASGDATIECVDGGSESVDFETLFRLRLSEKLDKLFADDRDLPTQFVLVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLDVPKTGARTTSGGASAAAAA---RQKRVHLAPNPAWLRVNEVTIGVSSTDALFDLSGDEVSAGGKGTNRLARLAGHLLQQQSFYPLFPPPAGSAAQLDMRHAHRWGMPATPDVLLVPSRLAQFARQVQ 634          
BLAST of mRNA_Ecto-sp13_S_contig10916.817.1 vs. uniprot
Match: W7TPC9_9STRA (DNA polymerase alpha subunit B n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPC9_9STRA)

HSP 1 Score: 364 bits (934), Expect = 2.540e-114
Identity = 218/462 (47.19%), Postives = 275/462 (59.52%), Query Frame = 0
Query:  117 YSSRKNAGQKTTSYNPALGLRGLSVAPSPRQAGTRCDVVVDGAVGAPARYRYMYTPLEERAAALEKGLVALQGQMERRFGL---TEITPVGVPRQEQVVTVGRVCCESTEGKINRASILLEXXXXXXXXXXXXXXXXXXXXXALFPGQVVAVQGVNGSGGRMVARGIIDGVPRPLPSSRPSDLLRVQHGADLGGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMGPFVDAEHPKVASGDATIECVDGGSESVDFETLFRLRLSEKLDTLFADDRDLPTQFVLVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLDVPKTGVRTTSXXXXXXXXXXXXRQKRVHLAPNPAWLRVNEVTIGVSSTDALFDLSGDEVSAGGKGTNRLARLAGHLLQQQSFYPLFPPPAGSAAQLDMRHAHRWGMPATPDVLLVPSRLAQFARQV 575
            Y +R NAGQK  +   AL                         +  P+RYR+MYT LEERA A EK L+ LQ  +  R GL    E+TPVGVP+QE V  +GRVCCE+ EG+IN+AS+LLE                     +LFPGQVVAV+GVN SG +MV R II+G+PRP  +S    +L  QH +   GG ALS+  AAGP+TT+DSL YEPL DLL  + A +PDV VL GPFVDA HP+VASG+  I       ESVDFE+LF++R+S  L+ L+  +  L ++ VLVPSL DVFH+     PP  DR+ GGV      + EER+  L +P    +  +              KR++   NP++  VNEV +GV++ D L  LSGDEVS      NRLARLA HLLQQQSF+PLFPPPA   AQLD+RHA    MP TPDVLL+PS+L  F + V
Sbjct:  206 YLNRTNAGQKAGTLPGALD------------------------INLPSRYRFMYTTLEERARAQEKMLLRLQDDLVAR-GLEAEAEVTPVGVPKQETVTVIGRVCCEAPEGRINKASVLLEGSRRDSGGFRVKLELGQLPAFSLFPGQVVAVEGVNSSGFKMVVRRIIEGIPRPFLTSPAKKMLEFQHDSLYQGGGALSLLVAAGPYTTTDSLEYEPLEDLLKVIAARQPDVAVLCGPFVDANHPQVASGETEIAGAGEEKESVDFESLFKMRVSLFLEGLYDTNPTLASRIVLVPSLNDVFHD----HPPLADRIPGGVPSPW--FEEERLGDLGLPFASEKDGA-------------DKRLYCLSNPSFFTVNEVAVGVTTNDILCHLSGDEVSY--NPGNRLARLAAHLLQQQSFFPLFPPPADGQAQLDLRHADHLRMPITPDVLLLPSKLTPFVKDV 621          
BLAST of mRNA_Ecto-sp13_S_contig10916.817.1 vs. uniprot
Match: A0A836CA88_9STRA (DNA polymerase alpha subunit B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA88_9STRA)

HSP 1 Score: 359 bits (921), Expect = 3.990e-112
Identity = 233/546 (42.67%), Postives = 284/546 (52.01%), Query Frame = 0
Query:   68 SGTKRPMLPFSSPDPKARSKLARQDGVGGDGASLSPTSVQSPPDLVR--------------------AVYSSRKNAGQKTTSYNPALGLRGLSVAPSPRQAGT-----RCDVVVDGAVGAPARYRYMYTPLEERAAALEKGLVALQGQMERRFGLTEITPVGVPRQEQVVTVGRVCCESTEGKINRASILLEXXXXXXXXXXXXXXXXXXXXXALFPGQVVAVQGVNGSGGRMVARGIIDGVPRPLPSSRPSDLLRVQHGADLGGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMGPFVDAEHPKVASGDATIECVDGG---------SESVDFETLFRLRLSEKLDTLFADDRDLPTQFVLVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLDVPKTGVRTTSXXXXXXXXXXXXRQKRVHLAPNPAWLRVNEVTIGVSSTDALFDLSGDEVSAGGKGTNRLARLAGHLLQQQSFYPLFPPPAGSAAQLDMRHAHRWGMP---ATPDVLLVPSRLAQFARQVQ 576
            S  KRP+    SP     +K AR  G GG  +     SVQ  P   R                    A Y+ R NAG +   YNP+  +   ++A             RC V     VGA ARYRYM+ PLEER+   E  L+A   ++ R   L E+TPVGVPRQE+V  VGRV CES EG++ RAS LLE                     ALFPGQ+VA +G+N  G RM  RG++ G P P     P+                     AAGP+TT D+L YEPLNDLL  V+  RPDVVVLMGPFVDAEHP +A+G A +  V GG         +E VDFETLFRLR+ +KL+ + AD    PTQFVL+PS RD FH+  YPQPPF D V GG  LG+G Y ++ ++ L +P                    R  RV   PNPA   V       +S D+LFDLS +E + G  G  RLARLA HLLQQ+SFYPL P  AG    LD R A    +    A PDVLL+P RLAQFAR V+
Sbjct:  127 SHLKRPLPGLMSPPGSTVNKAART-GAGGFSSPAPSLSVQQTPVAARSGGGXXXXXXXXXXAAHMPQAAYADRANAGARVLEYNPSKLMHAGAIAAXXXXXXXXXXRQRCSVEPICGVGAAARYRYMFAPLEERSRLQEAALLAATAELARAHALGELTPVGVPRQEEVTVVGRVVCESGEGRMGRASALLEGSWRDSGGARAALALDALPSFALFPGQIVAARGINSGGMRMAVRGLLPGSPAP-----PAXXXXXXXXXXXXXXXXXXXXVAAGPYTTDDNLEYEPLNDLLAHVQETRPDVVVLMGPFVDAEHPLIAAGAAALP-VPGGXXXXXXXDAAEPVDFETLFRLRVCDKLERVLADPAH-PTQFVLIPSTRDAFHDATYPQPPFADAVAGGAPLGIGEYADDAVYTLGLP--------------------RDARVACLPNPAAFAVGGAVFAATSADSLFDLSCEEAAGGAGGAPRLARLADHLLQQRSFYPLRPARAG--VPLDPRRAAALALAPRGAAPDVLLLPGRLAQFARDVR 642          
BLAST of mRNA_Ecto-sp13_S_contig10916.817.1 vs. uniprot
Match: A0A7S2ERG3_9STRA (DNA polymerase alpha subunit B n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ERG3_9STRA)

HSP 1 Score: 296 bits (757), Expect = 3.470e-88
Identity = 193/537 (35.94%), Postives = 273/537 (50.84%), Query Frame = 0
Query:   76 PFSSPDPKARSKLARQDGVGGDGASLSPTSVQ------SPPDLVRAV----YSSRKNAGQKTTSYNPALGLRGLSVAPSPRQAGTRCDVVVDGAVGAPARYRYMYTPLEERAAALEKGLVALQGQMERRF--------------GLTEITPVGVPRQEQVVTVGRVCCESTEGKINRASILLEXXXXXXXXXXXXXXXXXXXXX--------ALFPGQVVAVQGVNGSGGRMVARGIIDGVPRPLPSSRPSDLLRVQHGADLGGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMGPFVDAEHPKVASGDATIECVDGGSESVDFETLFRLRLSEKLDTLFADDRDLPTQFVLVPSLRDVFHEFVYPQPPFHDRV-EGGVELGVGAYPEERMFVLDVPKTGVRTTSXXXXXXXXXXXXRQKRVHLAPNPAWLRVNEVTIGVSSTDALFDLSGDEVSAGGKGTNRLARLAGHLLQQQSFYPLFPPPAGSA----AQLDMRHAHRWGMPATPDVLLVPSRLAQFARQV 575
            P  +P PK R    +++ V     S+SP   +      +P  +++      Y  RKNAG    SYNP   L  LS + +P       +           + R+M+T  ++RA AL K LV    +++  +               L  +  VGVPRQE+V  +GR+C E+ EGK+NR S+LLE                             +LFPGQ+VAV+G+N SG ++VA  + +G   P       ++         G    + I   AGP+TT D+L Y PL+DLL  +R  +PDVV+L GPFVD +HP V SG+  I+  +G    +  E LF  R+S  L+ LF D+  L TQFVLVP L D   EFVYPQPP  DR+ +GG +L + +        +D    G+                  KR+H  PNP  LR+NEVTIG++STD LF ++ DE +      +RLARL  HL+QQQS+YPL+PPP  +A      LD++   +W M   PD+L+VPS+L  FAR+V
Sbjct:  108 PSQTPPPKQRRVEIKEEEVT-PRVSVSPLKSKLSPVPPTPSSILKGANTPKYEERKNAGATVASYNPH-SLTPLSSSSAPHIFYKHVE-----------KCRFMFTTPQDRANALNKRLVEFGKRIQEVYDIKDMYDVEEDQEVALARLENVGVPRQEKVCCIGRICNEAHEGKLNRTSLLLEGSRHQSNGMRVNLDISPLLDANLETRSSFSLFPGQIVAVEGINASGRKLVAHKLCEGAAPPKAVLTAGEMKEFYKSEKEG----MKIMTCAGPYTTMDNLEYNPLSDLLQQIREEQPDVVILTGPFVDIKHPLVQSGNVEIDVGEGNMSKIPHEALFAQRISALLEQLFEDEEGLGTQFVLVPHLDDAVAEFVYPQPPLSDRLPKGGKQLNLSSAE-----AIDFGSLGLHHIESANRQPGQSTTP--KRIHCVPNPCTLRINEVTIGITSTDVLFHMNCDEANGNLPPGSRLARLTQHLIQQQSYYPLYPPPVSNARNSSVNLDLKQMEKWSMECQPDILIVPSKLTTFARKV 620          
BLAST of mRNA_Ecto-sp13_S_contig10916.817.1 vs. uniprot
Match: A0A7S2F9H8_9STRA (DNA polymerase alpha subunit B n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2F9H8_9STRA)

HSP 1 Score: 281 bits (719), Expect = 1.990e-86
Identity = 155/313 (49.52%), Postives = 203/313 (64.86%), Query Frame = 0
Query:  266 QGVNGSGGRMVARGIIDGVPRPLPSSRPSDLLRVQHGADLGGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMGPFVDAEHPKVASGDATIECVDGGSESVDFETLFRLRLSEKLDTLFADDRDLPTQFVLVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLDVPKTGVRTTSXXXXXXXXXXXXRQKRVHLAPNPAWLRVNEVTIGVSSTDALFDLSGDEVSAGGKGTNRLARLAGHLLQQQSFYPLFPPPAGSAAQ---LDMRHAHRWGMPATPDVLLVPSRLAQFARQV 575
            +G+N SG RMV + + +GVPRPLP S P +L+++ HG    G + LSI  AAGPF T+D+L YEPL+DLL +  A   DV+VL GPFVD  HPK++ GD  IE  DG  ESVD++T F  ++S  L+TL+ ++ D   Q VLVPSL D  H++V+PQPPF DRVEGG +     +PEE++F LD+P TG                   KRVH   NPA ++VNEV +GV+STD L  L   E++     +NRL RLA HLL+QQSF+PLFP   G A +   +DM  + R  MP +PDVLLVPSRLA FAR++
Sbjct:    1 EGINSSGTRMVVKNLCEGVPRPLPRSAPDELMKLHHGV---GSQPLSIAVAAGPFCTNDNLDYEPLSDLLHS--AKHNDVLVLCGPFVDVNHPKLSGGDVDIETEDG-VESVDYDTFFNFKISGVLETLYEENPDTKLQVVLVPSLHDAHHDYVFPQPPFADRVEGGQQSPF--FPEEKLFTLDIPHTG-------------GLGEDSKRVHCVSNPAMIKVNEVVVGVTSTDVLMQLGKAEIAQRPMSSNRLGRLAEHLLKQQSFHPLFPANGGVAGEPVPVDMTKSDRLRMPMSPDVLLVPSRLATFARKL 292          
BLAST of mRNA_Ecto-sp13_S_contig10916.817.1 vs. uniprot
Match: B8BYS5_THAPS (DNA polymerase alpha subunit B n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BYS5_THAPS)

HSP 1 Score: 291 bits (746), Expect = 3.540e-86
Identity = 187/530 (35.28%), Postives = 269/530 (50.75%), Query Frame = 0
Query:   80 PDPKARSKLARQDGVGGDGASLSPTSVQSPPDLVRAVYSSRKNAGQKTTSYNPALGLRGLSVAPSPRQAGTRCDVVVDGAVGAPARYRYMYTPLEERAAALEKGLVALQGQMERRFGL--------------TEI--------TPVGVPRQEQVVTVGRVCCESTEGKINRASILLEXXXXXXXXXXXXXXXXXXXXX-------ALFPGQVVAVQGVNGSGGRMVARGIIDGVPRPLPSSRPSDLLRVQHGADLGGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMGPFVDAEHPKVASGDATIECVDGGSESVDFETLFRLRLSEKLDTLFADDRDLPTQFVLVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEE-----RMFVLDVPKTGVRTTSXXXXXXXXXXXXRQKRVHLAPNPAWLRVNEVTIGVSSTDALFDLSGDEVSAGGKGTNRLARLAGHLLQQQSFYPLFPPPAGSAAQLDMRHAHRWGMPATPDVLLVPSRLAQFARQV 575
            P  K+  K   + G G    S +P S      L  AV  + +NA   TT     +     S  P P    T               +R+M+TPL  RA ALE  ++ +   +  ++ +               E+        TPVG+P+Q +VV VGR+C E+ EG++NRASI LE                            + FPGQ+VAV+G+N SG  M A  + +GVP P+  S   +L++  +G D   G  LSI +  GPFTT D+L Y+PL D++  +   +PDVV++ GPFVD   P V  G+ TI   DG  + V +E LF+ + +  L+ ++A+D D+ TQFVLVPS  D+  E VYPQPP    V   V  GV  + +E       +V    +  ++T+             R KRVH   NP  L++NE+++GV+S+D LF +S DE +A      RL R+A HL+QQ+S+YPLFP  A   A LD+  +  W MP  PD+L+VPS+L  FAR+V
Sbjct:  170 PTAKSAPKYQDRTGTGSLVTSYNPNS------LPTAVEVNAQNADNATTQKTCTIQYHPSSTHPQPPTKSTP--------------FRHMFTPLATRAKALESRILTMSDSICEKYNIKSEEEEMLKYEHVSAEVVDDNMACWTPVGIPKQGKVVCVGRICNEAHEGRLNRASIRLEGSRKDSSGSRIHLDLNSLVTNNDNNQSYSFFPGQIVAVEGINSSGRTMQASRLYEGVPPPVEKSTAKELIKYNYGPDGQNGMPLSIVSMCGPFTTKDNLEYDPLVDMVMKISEDQPDVVIMCGPFVDGRQPLVQGGEPTITDEDGNEKKVSYENLFQTKFAALLEEMYANDPDMKTQFVLVPSTEDMICESVYPQPPL---VNQEVTSGVKKFNDEFGNLGLNYVEIAGRENIKTSE------------RTKRVHCVSNPCTLKINELSVGVTSSDVLFHISSDETNANLPPGGRLTRIAQHLIQQRSYYPLFP--AAKGACLDLSRSDEWEMPVQPDILIVPSKLTTFARKV 662          
BLAST of mRNA_Ecto-sp13_S_contig10916.817.1 vs. uniprot
Match: A0A1Z5K576_FISSO (DNA polymerase alpha subunit B n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K576_FISSO)

HSP 1 Score: 280 bits (716), Expect = 2.490e-82
Identity = 165/418 (39.47%), Postives = 236/418 (56.46%), Query Frame = 0
Query:  166 YRYMYTPLEERAAALEKGLVALQGQMERRFGL---TEITP---VGVPRQEQVVTVGRVCCESTEGKINRASILLEXXXXXXXXXXXXXXXXXXXXX-ALFPGQVVAVQGVNGSGGRMVARGIIDGVPRPLPSSRPSDLLRVQHGADLGGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMGPFVDAEHPKVASGDATIECVDGGSESVDFETLFRLRLSEKLDTLFADDRDLPTQFVLVPSLRDVFHEFVYPQPPFHDRVEGGVELGV-GAYPEERMFVLDVPKTGVRTTSXXXXXXXXXXXXRQKRVHLAPNPAWLRVNEVTIGVSSTDALFDLSGDEVSAGGKGTNRLARLAGHLLQQQSFYPLFPPPAGSAAQLDMRHAHRWGMPATPDVLLVPSRLAQFARQV 575
            YR ++T  E+RA AL++ L+ +   +  ++ L    E+ P   VG+PR +QV  +GR+C  +  GKIN  S+LLE                      ++FPGQ+VA++G+N +G ++  + + +G      +SR  DL +    A    G+ + +  AAGPFTTSD+  Y+P  DLL  V+  +PDVV+L GPFVD  HP V SG   ++  DG    V +ET F  ++S  L+ L  ++  L TQFVLVPSL D   E+VYPQPPF DRV GG++  + GA              G+   +              KRVH  PNP  L++NEV IG++STD LF +S DE +A     +RLAR++ HLLQQ+S+YPLFPP  G    +D ++   W MP  PD+LL+PS+LA F+R V
Sbjct:  206 YRSLFTTTEQRATALDQQLIHMGQHLMEKYQLGQSDEVAPLEGVGIPRADQVCNIGRICNAAHYGKINATSVLLEGSRAAVGGARVAVDLSTLSSQYSVFPGQIVALEGMNPTGRKLQVQRLCEGAAAAPVTSRVRDLRQYHLQAQQ--GQPVKLLTAAGPFTTSDNFQYQPWQDLLHVVQNEQPDVVILTGPFVDMNHPAVQSGQTALQDEDGNDVIVPYETFFMHKISLLLEELLTENPLLMTQFVLVPSLEDATAEWVYPQPPFQDRVSGGLQPNIPGA-------------DGITIGTMGLDYVETATELPAKRVHCVPNPCTLQINEVVIGITSTDVLFHMSADETNANLPPGSRLARISQHLLQQRSYYPLFPPAPGM--NMDYQYMEYWSMPCQPDLLLLPSKLACFSRIV 606          
BLAST of mRNA_Ecto-sp13_S_contig10916.817.1 vs. uniprot
Match: A0A1Z5KI39_FISSO (DNA polymerase alpha subunit B n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KI39_FISSO)

HSP 1 Score: 279 bits (713), Expect = 3.860e-82
Identity = 189/511 (36.99%), Postives = 274/511 (53.62%), Query Frame = 0
Query:   75 LPFSSPDPKARSKLARQDGVGGDGASLSPTSVQSPPDLVRAV--YSSRKNAGQKTTSYNPALGLRGLSVAPSPRQAGTRCDVVVDG-AVGAPARYRYMYTPLEERAAALEKGLVALQGQMERRFGL---TEITP---VGVPRQEQVVTVGRVCCESTEGKINRASILLEXXXXXXXXXXXXXXXXXXXXXALFPGQVVAVQGVNGSGGRMVARGIIDGVPRPLPSSRPSDLLRVQHGADLGGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMGPFVDAEHPKVASGDATIECVDGGSESVDFETLFRLRLSEKLDTLFADDRDLPTQFVLVPSLRDVFHEFVYPQPPFHDRVEGGVELGV-GAYPEERMFVLDVPKTGVRTTSXXXXXXXXXXXXRQKRVHLAPNPAWLRVNEVTIGVSSTDALFDLSGDEVSAGGKGTNRLARLAGHLLQQQSFYPLFPPPAGSAAQLDMRHAHRWGMPATPDVLLVPSRLAQFARQV 575
            LP  +P P  R +LA         +SLSP     PP  ++    Y +R  AGQ  ++++ A   R  +  P  R    +C +  D  +      YR M+T  E+RA AL + L+ +   +  ++ L    ++ P   VG+PR +QV  VGR+C  +  GKIN  S LLE                     ++FPGQ+VA++G+N +G ++  + + +G      ++R S L   Q+      G+ L +  AAGPFTTSD+  Y+PL DLL  V+  +PDVV+L GPFVD +HP V SG   ++  +G    V +ET F  ++S  L+ L  +   L TQFVLVPSL D   E+VYPQPPF DRV GG++  + GA              G+   +              +RVH  PNP  L++NEV IG++STD LF +S DE +A     +RLAR++ HLLQQ+S+YPLFPP  G    +D ++  +W MP  PDVL++PS+LA F+R V
Sbjct:   98 LPHVTP-PAKRLQLAVATEPRRSSSSLSP----GPPVSLQPSDKYETRTGAGQIVSTFS-AKEKRTATYVPLSRP---KCAIRKDSFSTNLSHTYRSMFTTTEQRATALNQQLLEMTKHLIDKYQLGQSDQVAPLEGVGIPRADQVCNVGRICNAAHAGKINATSCLLEGSRAEGGVRVSLDWSGVSQY-SVFPGQIVALEGMNPTGRKLQVQRLCEGAAAAPVTTRRSALR--QYHLQAQEGQPLKLVTAAGPFTTSDNFHYQPLQDLLHVVQQEQPDVVILTGPFVDLDHPAVQSGQTILQDEEGNDVIVPYETFFVHKISLLLEELLTEHPMLMTQFVLVPSLEDATAEWVYPQPPFQDRVPGGLQPNIPGA-------------DGITIGTMGLDYVETATELPCQRVHCVPNPCTLQINEVVIGITSTDVLFHMSADETNANLPPGSRLARISQHLLQQRSYYPLFPPAPGM--NMDYQYMEQWSMPCQPDVLILPSKLACFSRTV 581          
BLAST of mRNA_Ecto-sp13_S_contig10916.817.1 vs. uniprot
Match: A0A7S4EDL8_9STRA (DNA polymerase alpha subunit B n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EDL8_9STRA)

HSP 1 Score: 273 bits (698), Expect = 1.190e-80
Identity = 196/554 (35.38%), Postives = 273/554 (49.28%), Query Frame = 0
Query:   59 TVTSEDLASSGTKRPML-PFSSPDPKARSKLARQDGVGGDGASLSPTSVQSPPDLVRAVYSSRKNAGQKTTSYNPALGLRG-------------LSVAPSPRQAGTRCDVVVDG-------AVGAPARYRYMYTPLEERAAALEKGLVALQGQMERRFGLTEITP--VGVPRQEQVVTVGRVCCESTEGKINRASILLEXXXXXXXXXXXXXXXXXXXXXALFPGQVVAVQG-VNGSGGRMVARGIIDGVPRPLPSSRPSDLLRVQHGADLGGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMGPFVDAEHPKVASGDATIECVDGGSESVDFETLFRLRLSEKLDTLFADDRDLPTQFVLVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLDVPKTGVRTTSXXXXXXXXXXXXRQ--KRVHLAPNPAWLRVNEVTIGVSSTDALFDLSGDEVSAGGKGTN------RLARLAGHLLQQQSFYPLFPPPAGSA----AQLDMRHAHRWGMPATPDVLLVPSRLAQFARQVQ 576
            T  S+    S  KRP+  P  +P P+ +   A      G+  + + TS + PP      Y  R N G      N  L  R              +  AP+ +           G       AVG   RYR+M+TP  ER AAL+  LV    ++   F   ++ P  +G   Q   +  GRVC ++ +G++N++S+ LE                     ALFPGQVV V G   G  G ++AR II G P P P+S P+  ++  H       + LSI+AA+GP+TTSD L Y PL DLL A RAA+PD VVL+GPFVDA+HP   + D     +  G ESVD  TLF L+++  L+ L  ++ D PTQF+L P+ RD+  E V+PQPP                       LD P  G +  +             +   +VH+  NP   ++NEV +GV++TD LF LS  E+   G+  +      R+ARLA HLL Q+SFYPLFPPP+ S+    A +D+R   +W +P  PDVL+ PS+L  FAR VQ
Sbjct:    6 TPVSDAPPPSTLKRPLENPTVTPAPRKKVSFA------GETPTATETSPKPPPSTATK-YKDRTNGGATVDVANKHLQRRAAWGDLGSVSQRAVVVAAPTEKDVDAWTSSKAYGGTESTQLAVGTATRYRHMFTPPGERCAALDASLVEAAQKIRENFSEKDVEPCAIGTATQTPALFCGRVCLDALDGRLNKSSVCLEGERSEGGFRVPLDLTAVEGSYALFPGQVVGVVGSAPGEDGTILARSIILGSPAP-PASTPAKQMQEFHTKQQN-NQPLSIWAASGPYTTSDDLDYSPLKDLLAACRAAKPDAVVLLGPFVDADHPLAKNND-----LKEGDESVDAATLFVLKVAWALEKLVIEE-DCPTQFILAPATRDLVAEPVFPQPP-----------------------LDAPPLGAQNDARPSWQDEMPVGSLELPSQVHVVGNPGLFKINEVVVGVTATDVLFQLSSQELFHNGRDNSEIAKMPRVARLASHLLSQRSFYPLFPPPSMSSTVADAPVDLRQHGKWKLPLQPDVLITPSKLQPFARDVQ 521          
BLAST of mRNA_Ecto-sp13_S_contig10916.817.1 vs. uniprot
Match: A0A7S2FH66_9STRA (DNA polymerase alpha subunit B n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FH66_9STRA)

HSP 1 Score: 271 bits (694), Expect = 1.070e-79
Identity = 186/517 (35.98%), Postives = 268/517 (51.84%), Query Frame = 0
Query:  101 LSPTSVQSPPDLVRAV---------YSSRKNAGQKTTSY---------NPALGLRGLSVAPSPRQAGTRCDVVVDGAVGAPA--------------RYRYMYTPLEERAAALEKGLVALQGQMERRFGL---TEITPVGVPRQEQVVTVGRVCCEST-EGKINRASILLEXXXXXXXXXXXXXXXXXXXXXALFPGQVVAVQGVNGSGGRMVARGIIDGVPRPLPSSRPSDLLRVQHGADLGGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMGPFVDAEHPKVASGDATI--ECVDGGS---ESVDFETLFRLRLSEKLDTLFADDRDLPTQFVLVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLDVPKTGVRTTSXXXXXXXXXXXXRQKRVHLAPNPAWLRVNEVTIGVSSTDALFDLSGDEVSAGGKGTNRLARLAGHLLQQQSFYPLFPPPAGSAAQ----LDMRHAHRWGMPATPDVLLVPSRLAQFA 572
             SP+S+Q+P   +  V         Y++RKNAG  T            +P   + G+S  P        C + V G  G+PA               YR+MYT + +RAA+L++    ++ ++    G    +  +PVGV  Q+ VV  GRVCC++  EGKIN+ SILLE                     ALFPGQ V V+G+N SG RMV + ++ GVPRPLP ++ +                L +  A+GPF  +++L Y PL DLL  + A   DV++L GPFVD  HP++ SG   +  +  DG +   ES+D+  LF L++++ L+ +         Q V+VPSL D FH+ VYPQPP  D+   GV+     +PEE+ F +++P       +              KR+HL  NPA LR+NEV +G+SSTD L  +   E++   K   RL RLA HL+ QQSF+PLFP   G  A     LD+  + RW MP +PD+L++PS+LA FA
Sbjct:   64 FSPSSLQTPGQKIDIVSHPVTPSKSYATRKNAGDITLEMRAKIEVPTDSPGKEINGMSRQP--------CHINVFGEPGSPAPESDSSHESVGVASHYRHMYTTVMDRAASLQRSFDHMEQELLAHAGKEHSSRRSPVGVRSQDPVVCFGRVCCDTLGEGKINKTSILLEGGRMEGGQRIELKLQDLSSF-ALFPGQWVLVEGINSSGPRMVVKRLMTGVPRPLPQAQITKKRT----------SPLRLVVASGPFCCTNNLDYAPLKDLL--LNANSADVLILSGPFVDVAHPQLKSGVVLMAGDTDDGATCEMESLDYCNLFNLKVTQALEDMQDAHPSSTLQIVMVPSLADAFHDCVYPQPPLTDQSRKGVKSPW--FPEEKYFDVEIPFAAQTEVTG-------------KRMHLVSNPAMLRINEVVVGISSTDILMSMGRAEIAENPKNKQRLPRLAEHLVNQQSFFPLFPANGGVKANEDVPLDLSQSERWRMPVSPDILILPSKLATFA 544          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10916.817.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTZ2_ECTSI0.000e+090.47DNA polymerase alpha subunit B n=2 Tax=Ectocarpus ... [more]
W7TPC9_9STRA2.540e-11447.19DNA polymerase alpha subunit B n=2 Tax=Monodopsida... [more]
A0A836CA88_9STRA3.990e-11242.67DNA polymerase alpha subunit B n=1 Tax=Tribonema m... [more]
A0A7S2ERG3_9STRA3.470e-8835.94DNA polymerase alpha subunit B n=2 Tax=Ditylum bri... [more]
A0A7S2F9H8_9STRA1.990e-8649.52DNA polymerase alpha subunit B n=1 Tax=Florenciell... [more]
B8BYS5_THAPS3.540e-8635.28DNA polymerase alpha subunit B n=1 Tax=Thalassiosi... [more]
A0A1Z5K576_FISSO2.490e-8239.47DNA polymerase alpha subunit B n=1 Tax=Fistulifera... [more]
A0A1Z5KI39_FISSO3.860e-8236.99DNA polymerase alpha subunit B n=1 Tax=Fistulifera... [more]
A0A7S4EDL8_9STRA1.190e-8035.38DNA polymerase alpha subunit B n=1 Tax=Pelagomonas... [more]
A0A7S2FH66_9STRA1.070e-7935.98DNA polymerase alpha subunit B n=1 Tax=Dictyocha s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 233..234
IPR016722DNA polymerase alpha, subunit BPIRSFPIRSF018300DNA_pol_alpha_2coord: 7..457
e-value: 2.3E-58
score: 196.0
coord: 467..576
e-value: 3.9E-30
score: 102.8
IPR016722DNA polymerase alpha, subunit BPANTHERPTHR23061DNA POLYMERASE 2 ALPHA 70 KDA SUBUNITcoord: 5..575
IPR007185DNA polymerase alpha/delta/epsilon, subunit BPFAMPF04042DNA_pol_E_Bcoord: 314..572
e-value: 3.3E-36
score: 124.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10916contigEcto-sp13_S_contig10916:13..5094 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10916.817.1mRNA_Ecto-sp13_S_contig10916.817.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10916 1..5094 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10916.817.1 ID=prot_Ecto-sp13_S_contig10916.817.1|Name=mRNA_Ecto-sp13_S_contig10916.817.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=576bp
MSSWAGFETEVAKSKAAASTPTASAGTASTPSAASRSSSRPPSASIVTPR
PAGRRVVNTVTSEDLASSGTKRPMLPFSSPDPKARSKLARQDGVGGDGAS
LSPTSVQSPPDLVRAVYSSRKNAGQKTTSYNPALGLRGLSVAPSPRQAGT
RCDVVVDGAVGAPARYRYMYTPLEERAAALEKGLVALQGQMERRFGLTEI
TPVGVPRQEQVVTVGRVCCESTEGKINRASILLEXXXXXXXXXXXXXXXX
XXXXXALFPGQVVAVQGVNGSGGRMVARGIIDGVPRPLPSSRPSDLLRVQ
HGADLGGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMG
PFVDAEHPKVASGDATIECVDGGSESVDFETLFRLRLSEKLDTLFADDRD
LPTQFVLVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLDV
PKTGVRTTSGGGGGGGSAAAARQKRVHLAPNPAWLRVNEVTIGVSSTDAL
FDLSGDEVSAGGKGTNRLARLAGHLLQQQSFYPLFPPPAGSAAQLDMRHA
HRWGMPATPDVLLVPSRLAQFARQVQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016722DNA_pol_alpha_bsu
IPR007185DNA_pol_a/d/e_bsu