mRNA_Ecto-sp13_S_contig10916.817.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig10916.817.1
Unique NamemRNA_Ecto-sp13_S_contig10916.817.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig10916.817.1 vs. uniprot
Match: D8LTZ2_ECTSI (DNA polymerase alpha subunit B n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTZ2_ECTSI)

HSP 1 Score: 968 bits (2503), Expect = 0.000e+0
Identity = 526/581 (90.53%), Postives = 530/581 (91.22%), Query Frame = 1
Query:    1 SRLGMSSWAGFETEVAKSKAAASTP-TASAGTXXXXXXXXXXXXXXXXXXXXXXXXAGRRVVNTVTSEDLASSGTKRPMLPFSSPDPKARSKLARQDGVGGDGASLSPTSVQSPPDLVRAVYSSRKNAGQKTTSYNPALGLRGLSVAPSPRQAGTRCDVVVDGAVGAPARYRYMYTPLEERAAALEKGLVALQGQMERRFGLTEITPVGVPRQEQVVTVGRVCCESTEGKINRASILLEXXXXXXXXXXXXXXXXXXXXXALFPGQVVAVQGVNGSGGRMVARGIIDGVPRPLPSSRPSDLLRVQHGADLGGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMGPFVDAEHPKVASGDATIECVDGGSESVDFETLFRLRLSEKLDTLFADDRDLPTQFVLVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLDVPKTGVRTTSXXXXXXXXXXXXRQKRVHLAPNPAWLRVNEVTIGVSSTDALFDLSGDEVSAGGKGTNRLARLAGHLLQQQSFYPLFPPPAGSAAQLDMRHAHRWGMPATPDVLLVPSRLAQFARQVQ 1740
            SRLGMSSWAGFETEVAKSKAAASTP  AS GT  XXXXXX XXXXXXXXX      AGRRVVNTVTSEDLASSGTKRPMLPFSSP+PKARSKLARQDG GGDGASLSPTSVQSPPDLVRAVYSSRKNAGQKT SYNPALGLRGLSVAPSPRQAGTRCDVVVDGAVGAPARYRYMYTPLEERAAALEKGLVALQGQMER+FGLTEITPVGVPRQEQVV VGRVCCESTEGKINRASILLE                     ALFPGQVVAVQGVNGSGGRMVARGIIDGVPRPLPSSRPSDLLR QHGA+LGGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMGPFVD+EHPKVASGDATIECVDGGSESVDFETLFRLRLSEKLD LFADDRDLPTQFVLVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLDVPKTG RTTS            RQKRVHLAPNPAWLRVNEVTIGVSSTDALFDLSGDEVSAGGKGTNRLARLAGHLLQQQSFYPLFPPPAGSAAQLDMRHAHRWGMPATPDVLLVPSRLAQFARQVQ
Sbjct:   57 SRLGMSSWAGFETEVAKSKAAASTPPAASTGTASXXXXXXRXXXXXXXXXIVTPRPAGRRVVNTVTSEDLASSGTKRPMLPFSSPNPKARSKLARQDGEGGDGASLSPTSVQSPPDLVRAVYSSRKNAGQKTASYNPALGLRGLSVAPSPRQAGTRCDVVVDGAVGAPARYRYMYTPLEERAAALEKGLVALQGQMERKFGLTEITPVGVPRQEQVVAVGRVCCESTEGKINRASILLEGSRRDSSGQRAHLDLRELQSFALFPGQVVAVQGVNGSGGRMVARGIIDGVPRPLPSSRPSDLLRAQHGAELGGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMGPFVDSEHPKVASGDATIECVDGGSESVDFETLFRLRLSEKLDKLFADDRDLPTQFVLVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLDVPKTGARTTSGGASAAAAA---RQKRVHLAPNPAWLRVNEVTIGVSSTDALFDLSGDEVSAGGKGTNRLARLAGHLLQQQSFYPLFPPPAGSAAQLDMRHAHRWGMPATPDVLLVPSRLAQFARQVQ 634          
BLAST of mRNA_Ecto-sp13_S_contig10916.817.1 vs. uniprot
Match: W7TPC9_9STRA (DNA polymerase alpha subunit B n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPC9_9STRA)

HSP 1 Score: 364 bits (934), Expect = 2.880e-114
Identity = 218/462 (47.19%), Postives = 275/462 (59.52%), Query Frame = 1
Query:  361 YSSRKNAGQKTTSYNPALGLRGLSVAPSPRQAGTRCDVVVDGAVGAPARYRYMYTPLEERAAALEKGLVALQGQMERRFGL---TEITPVGVPRQEQVVTVGRVCCESTEGKINRASILLEXXXXXXXXXXXXXXXXXXXXXALFPGQVVAVQGVNGSGGRMVARGIIDGVPRPLPSSRPSDLLRVQHGADLGGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMGPFVDAEHPKVASGDATIECVDGGSESVDFETLFRLRLSEKLDTLFADDRDLPTQFVLVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLDVPKTGVRTTSXXXXXXXXXXXXRQKRVHLAPNPAWLRVNEVTIGVSSTDALFDLSGDEVSAGGKGTNRLARLAGHLLQQQSFYPLFPPPAGSAAQLDMRHAHRWGMPATPDVLLVPSRLAQFARQV 1737
            Y +R NAGQK  +   AL                         +  P+RYR+MYT LEERA A EK L+ LQ  +  R GL    E+TPVGVP+QE V  +GRVCCE+ EG+IN+AS+LLE                     +LFPGQVVAV+GVN SG +MV R II+G+PRP  +S    +L  QH +   GG ALS+  AAGP+TT+DSL YEPL DLL  + A +PDV VL GPFVDA HP+VASG+  I       ESVDFE+LF++R+S  L+ L+  +  L ++ VLVPSL DVFH+     PP  DR+ GGV      + EER+  L +P    +  +              KR++   NP++  VNEV +GV++ D L  LSGDEVS      NRLARLA HLLQQQSF+PLFPPPA   AQLD+RHA    MP TPDVLL+PS+L  F + V
Sbjct:  206 YLNRTNAGQKAGTLPGALD------------------------INLPSRYRFMYTTLEERARAQEKMLLRLQDDLVAR-GLEAEAEVTPVGVPKQETVTVIGRVCCEAPEGRINKASVLLEGSRRDSGGFRVKLELGQLPAFSLFPGQVVAVEGVNSSGFKMVVRRIIEGIPRPFLTSPAKKMLEFQHDSLYQGGGALSLLVAAGPYTTTDSLEYEPLEDLLKVIAARQPDVAVLCGPFVDANHPQVASGETEIAGAGEEKESVDFESLFKMRVSLFLEGLYDTNPTLASRIVLVPSLNDVFHD----HPPLADRIPGGVPSPW--FEEERLGDLGLPFASEKDGA-------------DKRLYCLSNPSFFTVNEVAVGVTTNDILCHLSGDEVSY--NPGNRLARLAAHLLQQQSFFPLFPPPADGQAQLDLRHADHLRMPITPDVLLLPSKLTPFVKDV 621          
BLAST of mRNA_Ecto-sp13_S_contig10916.817.1 vs. uniprot
Match: A0A836CA88_9STRA (DNA polymerase alpha subunit B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA88_9STRA)

HSP 1 Score: 359 bits (921), Expect = 4.510e-112
Identity = 233/546 (42.67%), Postives = 284/546 (52.01%), Query Frame = 1
Query:  214 SGTKRPMLPFSSPDPKARSKLARQDGVGGDGASLSPTSVQSPPDLVR--------------------AVYSSRKNAGQKTTSYNPALGLRGLSVAPSPRQAGT-----RCDVVVDGAVGAPARYRYMYTPLEERAAALEKGLVALQGQMERRFGLTEITPVGVPRQEQVVTVGRVCCESTEGKINRASILLEXXXXXXXXXXXXXXXXXXXXXALFPGQVVAVQGVNGSGGRMVARGIIDGVPRPLPSSRPSDLLRVQHGADLGGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMGPFVDAEHPKVASGDATIECVDGG---------SESVDFETLFRLRLSEKLDTLFADDRDLPTQFVLVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLDVPKTGVRTTSXXXXXXXXXXXXRQKRVHLAPNPAWLRVNEVTIGVSSTDALFDLSGDEVSAGGKGTNRLARLAGHLLQQQSFYPLFPPPAGSAAQLDMRHAHRWGMP---ATPDVLLVPSRLAQFARQVQ 1740
            S  KRP+    SP     +K AR  G GG  +     SVQ  P   R                    A Y+ R NAG +   YNP+  +   ++A             RC V     VGA ARYRYM+ PLEER+   E  L+A   ++ R   L E+TPVGVPRQE+V  VGRV CES EG++ RAS LLE                     ALFPGQ+VA +G+N  G RM  RG++ G P P     P+                     AAGP+TT D+L YEPLNDLL  V+  RPDVVVLMGPFVDAEHP +A+G A +  V GG         +E VDFETLFRLR+ +KL+ + AD    PTQFVL+PS RD FH+  YPQPPF D V GG  LG+G Y ++ ++ L +P                    R  RV   PNPA   V       +S D+LFDLS +E + G  G  RLARLA HLLQQ+SFYPL P  AG    LD R A    +    A PDVLL+P RLAQFAR V+
Sbjct:  127 SHLKRPLPGLMSPPGSTVNKAART-GAGGFSSPAPSLSVQQTPVAARSGGGXXXXXXXXXXAAHMPQAAYADRANAGARVLEYNPSKLMHAGAIAAXXXXXXXXXXRQRCSVEPICGVGAAARYRYMFAPLEERSRLQEAALLAATAELARAHALGELTPVGVPRQEEVTVVGRVVCESGEGRMGRASALLEGSWRDSGGARAALALDALPSFALFPGQIVAARGINSGGMRMAVRGLLPGSPAP-----PAXXXXXXXXXXXXXXXXXXXXVAAGPYTTDDNLEYEPLNDLLAHVQETRPDVVVLMGPFVDAEHPLIAAGAAALP-VPGGXXXXXXXDAAEPVDFETLFRLRVCDKLERVLADPAH-PTQFVLIPSTRDAFHDATYPQPPFADAVAGGAPLGIGEYADDAVYTLGLP--------------------RDARVACLPNPAAFAVGGAVFAATSADSLFDLSCEEAAGGAGGAPRLARLADHLLQQRSFYPLRPARAG--VPLDPRRAAALALAPRGAAPDVLLLPGRLAQFARDVR 642          
BLAST of mRNA_Ecto-sp13_S_contig10916.817.1 vs. uniprot
Match: A0A7S2ERG3_9STRA (DNA polymerase alpha subunit B n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ERG3_9STRA)

HSP 1 Score: 296 bits (757), Expect = 3.880e-88
Identity = 193/537 (35.94%), Postives = 273/537 (50.84%), Query Frame = 1
Query:  238 PFSSPDPKARSKLARQDGVGGDGASLSPTSVQ------SPPDLVRAV----YSSRKNAGQKTTSYNPALGLRGLSVAPSPRQAGTRCDVVVDGAVGAPARYRYMYTPLEERAAALEKGLVALQGQMERRF--------------GLTEITPVGVPRQEQVVTVGRVCCESTEGKINRASILLEXXXXXXXXXXXXXXXXXXXXX--------ALFPGQVVAVQGVNGSGGRMVARGIIDGVPRPLPSSRPSDLLRVQHGADLGGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMGPFVDAEHPKVASGDATIECVDGGSESVDFETLFRLRLSEKLDTLFADDRDLPTQFVLVPSLRDVFHEFVYPQPPFHDRV-EGGVELGVGAYPEERMFVLDVPKTGVRTTSXXXXXXXXXXXXRQKRVHLAPNPAWLRVNEVTIGVSSTDALFDLSGDEVSAGGKGTNRLARLAGHLLQQQSFYPLFPPPAGSA----AQLDMRHAHRWGMPATPDVLLVPSRLAQFARQV 1737
            P  +P PK R    +++ V     S+SP   +      +P  +++      Y  RKNAG    SYNP   L  LS + +P       +           + R+M+T  ++RA AL K LV    +++  +               L  +  VGVPRQE+V  +GR+C E+ EGK+NR S+LLE                             +LFPGQ+VAV+G+N SG ++VA  + +G   P       ++         G    + I   AGP+TT D+L Y PL+DLL  +R  +PDVV+L GPFVD +HP V SG+  I+  +G    +  E LF  R+S  L+ LF D+  L TQFVLVP L D   EFVYPQPP  DR+ +GG +L + +        +D    G+                  KR+H  PNP  LR+NEVTIG++STD LF ++ DE +      +RLARL  HL+QQQS+YPL+PPP  +A      LD++   +W M   PD+L+VPS+L  FAR+V
Sbjct:  108 PSQTPPPKQRRVEIKEEEVT-PRVSVSPLKSKLSPVPPTPSSILKGANTPKYEERKNAGATVASYNPH-SLTPLSSSSAPHIFYKHVE-----------KCRFMFTTPQDRANALNKRLVEFGKRIQEVYDIKDMYDVEEDQEVALARLENVGVPRQEKVCCIGRICNEAHEGKLNRTSLLLEGSRHQSNGMRVNLDISPLLDANLETRSSFSLFPGQIVAVEGINASGRKLVAHKLCEGAAPPKAVLTAGEMKEFYKSEKEG----MKIMTCAGPYTTMDNLEYNPLSDLLQQIREEQPDVVILTGPFVDIKHPLVQSGNVEIDVGEGNMSKIPHEALFAQRISALLEQLFEDEEGLGTQFVLVPHLDDAVAEFVYPQPPLSDRLPKGGKQLNLSSAE-----AIDFGSLGLHHIESANRQPGQSTTP--KRIHCVPNPCTLRINEVTIGITSTDVLFHMNCDEANGNLPPGSRLARLTQHLIQQQSYYPLYPPPVSNARNSSVNLDLKQMEKWSMECQPDILIVPSKLTTFARKV 620          
BLAST of mRNA_Ecto-sp13_S_contig10916.817.1 vs. uniprot
Match: A0A7S2F9H8_9STRA (DNA polymerase alpha subunit B n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2F9H8_9STRA)

HSP 1 Score: 281 bits (719), Expect = 2.220e-86
Identity = 155/313 (49.52%), Postives = 203/313 (64.86%), Query Frame = 1
Query:  808 QGVNGSGGRMVARGIIDGVPRPLPSSRPSDLLRVQHGADLGGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMGPFVDAEHPKVASGDATIECVDGGSESVDFETLFRLRLSEKLDTLFADDRDLPTQFVLVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLDVPKTGVRTTSXXXXXXXXXXXXRQKRVHLAPNPAWLRVNEVTIGVSSTDALFDLSGDEVSAGGKGTNRLARLAGHLLQQQSFYPLFPPPAGSAAQ---LDMRHAHRWGMPATPDVLLVPSRLAQFARQV 1737
            +G+N SG RMV + + +GVPRPLP S P +L+++ HG    G + LSI  AAGPF T+D+L YEPL+DLL +  A   DV+VL GPFVD  HPK++ GD  IE  DG  ESVD++T F  ++S  L+TL+ ++ D   Q VLVPSL D  H++V+PQPPF DRVEGG +     +PEE++F LD+P TG                   KRVH   NPA ++VNEV +GV+STD L  L   E++     +NRL RLA HLL+QQSF+PLFP   G A +   +DM  + R  MP +PDVLLVPSRLA FAR++
Sbjct:    1 EGINSSGTRMVVKNLCEGVPRPLPRSAPDELMKLHHGV---GSQPLSIAVAAGPFCTNDNLDYEPLSDLLHS--AKHNDVLVLCGPFVDVNHPKLSGGDVDIETEDG-VESVDYDTFFNFKISGVLETLYEENPDTKLQVVLVPSLHDAHHDYVFPQPPFADRVEGGQQSPF--FPEEKLFTLDIPHTG-------------GLGEDSKRVHCVSNPAMIKVNEVVVGVTSTDVLMQLGKAEIAQRPMSSNRLGRLAEHLLKQQSFHPLFPANGGVAGEPVPVDMTKSDRLRMPMSPDVLLVPSRLATFARKL 292          
BLAST of mRNA_Ecto-sp13_S_contig10916.817.1 vs. uniprot
Match: B8BYS5_THAPS (DNA polymerase alpha subunit B n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BYS5_THAPS)

HSP 1 Score: 291 bits (746), Expect = 3.950e-86
Identity = 187/530 (35.28%), Postives = 269/530 (50.75%), Query Frame = 1
Query:  250 PDPKARSKLARQDGVGGDGASLSPTSVQSPPDLVRAVYSSRKNAGQKTTSYNPALGLRGLSVAPSPRQAGTRCDVVVDGAVGAPARYRYMYTPLEERAAALEKGLVALQGQMERRFGL--------------TEI--------TPVGVPRQEQVVTVGRVCCESTEGKINRASILLEXXXXXXXXXXXXXXXXXXXXX-------ALFPGQVVAVQGVNGSGGRMVARGIIDGVPRPLPSSRPSDLLRVQHGADLGGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMGPFVDAEHPKVASGDATIECVDGGSESVDFETLFRLRLSEKLDTLFADDRDLPTQFVLVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEE-----RMFVLDVPKTGVRTTSXXXXXXXXXXXXRQKRVHLAPNPAWLRVNEVTIGVSSTDALFDLSGDEVSAGGKGTNRLARLAGHLLQQQSFYPLFPPPAGSAAQLDMRHAHRWGMPATPDVLLVPSRLAQFARQV 1737
            P  K+  K   + G G    S +P S      L  AV  + +NA   TT     +     S  P P    T               +R+M+TPL  RA ALE  ++ +   +  ++ +               E+        TPVG+P+Q +VV VGR+C E+ EG++NRASI LE                            + FPGQ+VAV+G+N SG  M A  + +GVP P+  S   +L++  +G D   G  LSI +  GPFTT D+L Y+PL D++  +   +PDVV++ GPFVD   P V  G+ TI   DG  + V +E LF+ + +  L+ ++A+D D+ TQFVLVPS  D+  E VYPQPP    V   V  GV  + +E       +V    +  ++T+             R KRVH   NP  L++NE+++GV+S+D LF +S DE +A      RL R+A HL+QQ+S+YPLFP  A   A LD+  +  W MP  PD+L+VPS+L  FAR+V
Sbjct:  170 PTAKSAPKYQDRTGTGSLVTSYNPNS------LPTAVEVNAQNADNATTQKTCTIQYHPSSTHPQPPTKSTP--------------FRHMFTPLATRAKALESRILTMSDSICEKYNIKSEEEEMLKYEHVSAEVVDDNMACWTPVGIPKQGKVVCVGRICNEAHEGRLNRASIRLEGSRKDSSGSRIHLDLNSLVTNNDNNQSYSFFPGQIVAVEGINSSGRTMQASRLYEGVPPPVEKSTAKELIKYNYGPDGQNGMPLSIVSMCGPFTTKDNLEYDPLVDMVMKISEDQPDVVIMCGPFVDGRQPLVQGGEPTITDEDGNEKKVSYENLFQTKFAALLEEMYANDPDMKTQFVLVPSTEDMICESVYPQPPL---VNQEVTSGVKKFNDEFGNLGLNYVEIAGRENIKTSE------------RTKRVHCVSNPCTLKINELSVGVTSSDVLFHISSDETNANLPPGGRLTRIAQHLIQQRSYYPLFP--AAKGACLDLSRSDEWEMPVQPDILIVPSKLTTFARKV 662          
BLAST of mRNA_Ecto-sp13_S_contig10916.817.1 vs. uniprot
Match: A0A1Z5K576_FISSO (DNA polymerase alpha subunit B n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K576_FISSO)

HSP 1 Score: 280 bits (716), Expect = 2.770e-82
Identity = 165/418 (39.47%), Postives = 236/418 (56.46%), Query Frame = 1
Query:  508 YRYMYTPLEERAAALEKGLVALQGQMERRFGL---TEITP---VGVPRQEQVVTVGRVCCESTEGKINRASILLEXXXXXXXXXXXXXXXXXXXXX-ALFPGQVVAVQGVNGSGGRMVARGIIDGVPRPLPSSRPSDLLRVQHGADLGGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMGPFVDAEHPKVASGDATIECVDGGSESVDFETLFRLRLSEKLDTLFADDRDLPTQFVLVPSLRDVFHEFVYPQPPFHDRVEGGVELGV-GAYPEERMFVLDVPKTGVRTTSXXXXXXXXXXXXRQKRVHLAPNPAWLRVNEVTIGVSSTDALFDLSGDEVSAGGKGTNRLARLAGHLLQQQSFYPLFPPPAGSAAQLDMRHAHRWGMPATPDVLLVPSRLAQFARQV 1737
            YR ++T  E+RA AL++ L+ +   +  ++ L    E+ P   VG+PR +QV  +GR+C  +  GKIN  S+LLE                      ++FPGQ+VA++G+N +G ++  + + +G      +SR  DL +    A    G+ + +  AAGPFTTSD+  Y+P  DLL  V+  +PDVV+L GPFVD  HP V SG   ++  DG    V +ET F  ++S  L+ L  ++  L TQFVLVPSL D   E+VYPQPPF DRV GG++  + GA              G+   +              KRVH  PNP  L++NEV IG++STD LF +S DE +A     +RLAR++ HLLQQ+S+YPLFPP  G    +D ++   W MP  PD+LL+PS+LA F+R V
Sbjct:  206 YRSLFTTTEQRATALDQQLIHMGQHLMEKYQLGQSDEVAPLEGVGIPRADQVCNIGRICNAAHYGKINATSVLLEGSRAAVGGARVAVDLSTLSSQYSVFPGQIVALEGMNPTGRKLQVQRLCEGAAAAPVTSRVRDLRQYHLQAQQ--GQPVKLLTAAGPFTTSDNFQYQPWQDLLHVVQNEQPDVVILTGPFVDMNHPAVQSGQTALQDEDGNDVIVPYETFFMHKISLLLEELLTENPLLMTQFVLVPSLEDATAEWVYPQPPFQDRVSGGLQPNIPGA-------------DGITIGTMGLDYVETATELPAKRVHCVPNPCTLQINEVVIGITSTDVLFHMSADETNANLPPGSRLARISQHLLQQRSYYPLFPPAPGM--NMDYQYMEYWSMPCQPDLLLLPSKLACFSRIV 606          
BLAST of mRNA_Ecto-sp13_S_contig10916.817.1 vs. uniprot
Match: A0A1Z5KI39_FISSO (DNA polymerase alpha subunit B n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KI39_FISSO)

HSP 1 Score: 279 bits (713), Expect = 4.290e-82
Identity = 189/511 (36.99%), Postives = 274/511 (53.62%), Query Frame = 1
Query:  235 LPFSSPDPKARSKLARQDGVGGDGASLSPTSVQSPPDLVRAV--YSSRKNAGQKTTSYNPALGLRGLSVAPSPRQAGTRCDVVVDG-AVGAPARYRYMYTPLEERAAALEKGLVALQGQMERRFGL---TEITP---VGVPRQEQVVTVGRVCCESTEGKINRASILLEXXXXXXXXXXXXXXXXXXXXXALFPGQVVAVQGVNGSGGRMVARGIIDGVPRPLPSSRPSDLLRVQHGADLGGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMGPFVDAEHPKVASGDATIECVDGGSESVDFETLFRLRLSEKLDTLFADDRDLPTQFVLVPSLRDVFHEFVYPQPPFHDRVEGGVELGV-GAYPEERMFVLDVPKTGVRTTSXXXXXXXXXXXXRQKRVHLAPNPAWLRVNEVTIGVSSTDALFDLSGDEVSAGGKGTNRLARLAGHLLQQQSFYPLFPPPAGSAAQLDMRHAHRWGMPATPDVLLVPSRLAQFARQV 1737
            LP  +P P  R +LA         +SLSP     PP  ++    Y +R  AGQ  ++++ A   R  +  P  R    +C +  D  +      YR M+T  E+RA AL + L+ +   +  ++ L    ++ P   VG+PR +QV  VGR+C  +  GKIN  S LLE                     ++FPGQ+VA++G+N +G ++  + + +G      ++R S L   Q+      G+ L +  AAGPFTTSD+  Y+PL DLL  V+  +PDVV+L GPFVD +HP V SG   ++  +G    V +ET F  ++S  L+ L  +   L TQFVLVPSL D   E+VYPQPPF DRV GG++  + GA              G+   +              +RVH  PNP  L++NEV IG++STD LF +S DE +A     +RLAR++ HLLQQ+S+YPLFPP  G    +D ++  +W MP  PDVL++PS+LA F+R V
Sbjct:   98 LPHVTP-PAKRLQLAVATEPRRSSSSLSP----GPPVSLQPSDKYETRTGAGQIVSTFS-AKEKRTATYVPLSRP---KCAIRKDSFSTNLSHTYRSMFTTTEQRATALNQQLLEMTKHLIDKYQLGQSDQVAPLEGVGIPRADQVCNVGRICNAAHAGKINATSCLLEGSRAEGGVRVSLDWSGVSQY-SVFPGQIVALEGMNPTGRKLQVQRLCEGAAAAPVTTRRSALR--QYHLQAQEGQPLKLVTAAGPFTTSDNFHYQPLQDLLHVVQQEQPDVVILTGPFVDLDHPAVQSGQTILQDEEGNDVIVPYETFFVHKISLLLEELLTEHPMLMTQFVLVPSLEDATAEWVYPQPPFQDRVPGGLQPNIPGA-------------DGITIGTMGLDYVETATELPCQRVHCVPNPCTLQINEVVIGITSTDVLFHMSADETNANLPPGSRLARISQHLLQQRSYYPLFPPAPGM--NMDYQYMEQWSMPCQPDVLILPSKLACFSRTV 581          
BLAST of mRNA_Ecto-sp13_S_contig10916.817.1 vs. uniprot
Match: A0A7S4EDL8_9STRA (DNA polymerase alpha subunit B n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EDL8_9STRA)

HSP 1 Score: 273 bits (698), Expect = 1.320e-80
Identity = 196/554 (35.38%), Postives = 273/554 (49.28%), Query Frame = 1
Query:  187 TVTSEDLASSGTKRPML-PFSSPDPKARSKLARQDGVGGDGASLSPTSVQSPPDLVRAVYSSRKNAGQKTTSYNPALGLRG-------------LSVAPSPRQAGTRCDVVVDG-------AVGAPARYRYMYTPLEERAAALEKGLVALQGQMERRFGLTEITP--VGVPRQEQVVTVGRVCCESTEGKINRASILLEXXXXXXXXXXXXXXXXXXXXXALFPGQVVAVQG-VNGSGGRMVARGIIDGVPRPLPSSRPSDLLRVQHGADLGGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMGPFVDAEHPKVASGDATIECVDGGSESVDFETLFRLRLSEKLDTLFADDRDLPTQFVLVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLDVPKTGVRTTSXXXXXXXXXXXXRQ--KRVHLAPNPAWLRVNEVTIGVSSTDALFDLSGDEVSAGGKGTN------RLARLAGHLLQQQSFYPLFPPPAGSA----AQLDMRHAHRWGMPATPDVLLVPSRLAQFARQVQ 1740
            T  S+    S  KRP+  P  +P P+ +   A      G+  + + TS + PP      Y  R N G      N  L  R              +  AP+ +           G       AVG   RYR+M+TP  ER AAL+  LV    ++   F   ++ P  +G   Q   +  GRVC ++ +G++N++S+ LE                     ALFPGQVV V G   G  G ++AR II G P P P+S P+  ++  H       + LSI+AA+GP+TTSD L Y PL DLL A RAA+PD VVL+GPFVDA+HP   + D     +  G ESVD  TLF L+++  L+ L  ++ D PTQF+L P+ RD+  E V+PQPP                       LD P  G +  +             +   +VH+  NP   ++NEV +GV++TD LF LS  E+   G+  +      R+ARLA HLL Q+SFYPLFPPP+ S+    A +D+R   +W +P  PDVL+ PS+L  FAR VQ
Sbjct:    6 TPVSDAPPPSTLKRPLENPTVTPAPRKKVSFA------GETPTATETSPKPPPSTATK-YKDRTNGGATVDVANKHLQRRAAWGDLGSVSQRAVVVAAPTEKDVDAWTSSKAYGGTESTQLAVGTATRYRHMFTPPGERCAALDASLVEAAQKIRENFSEKDVEPCAIGTATQTPALFCGRVCLDALDGRLNKSSVCLEGERSEGGFRVPLDLTAVEGSYALFPGQVVGVVGSAPGEDGTILARSIILGSPAP-PASTPAKQMQEFHTKQQN-NQPLSIWAASGPYTTSDDLDYSPLKDLLAACRAAKPDAVVLLGPFVDADHPLAKNND-----LKEGDESVDAATLFVLKVAWALEKLVIEE-DCPTQFILAPATRDLVAEPVFPQPP-----------------------LDAPPLGAQNDARPSWQDEMPVGSLELPSQVHVVGNPGLFKINEVVVGVTATDVLFQLSSQELFHNGRDNSEIAKMPRVARLASHLLSQRSFYPLFPPPSMSSTVADAPVDLRQHGKWKLPLQPDVLITPSKLQPFARDVQ 521          
BLAST of mRNA_Ecto-sp13_S_contig10916.817.1 vs. uniprot
Match: A0A7S2FH66_9STRA (DNA polymerase alpha subunit B n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FH66_9STRA)

HSP 1 Score: 271 bits (694), Expect = 1.190e-79
Identity = 186/517 (35.98%), Postives = 268/517 (51.84%), Query Frame = 1
Query:  313 LSPTSVQSPPDLVRAV---------YSSRKNAGQKTTSY---------NPALGLRGLSVAPSPRQAGTRCDVVVDGAVGAPA--------------RYRYMYTPLEERAAALEKGLVALQGQMERRFGL---TEITPVGVPRQEQVVTVGRVCCEST-EGKINRASILLEXXXXXXXXXXXXXXXXXXXXXALFPGQVVAVQGVNGSGGRMVARGIIDGVPRPLPSSRPSDLLRVQHGADLGGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMGPFVDAEHPKVASGDATI--ECVDGGS---ESVDFETLFRLRLSEKLDTLFADDRDLPTQFVLVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLDVPKTGVRTTSXXXXXXXXXXXXRQKRVHLAPNPAWLRVNEVTIGVSSTDALFDLSGDEVSAGGKGTNRLARLAGHLLQQQSFYPLFPPPAGSAAQ----LDMRHAHRWGMPATPDVLLVPSRLAQFA 1728
             SP+S+Q+P   +  V         Y++RKNAG  T            +P   + G+S  P        C + V G  G+PA               YR+MYT + +RAA+L++    ++ ++    G    +  +PVGV  Q+ VV  GRVCC++  EGKIN+ SILLE                     ALFPGQ V V+G+N SG RMV + ++ GVPRPLP ++ +                L +  A+GPF  +++L Y PL DLL  + A   DV++L GPFVD  HP++ SG   +  +  DG +   ES+D+  LF L++++ L+ +         Q V+VPSL D FH+ VYPQPP  D+   GV+     +PEE+ F +++P       +              KR+HL  NPA LR+NEV +G+SSTD L  +   E++   K   RL RLA HL+ QQSF+PLFP   G  A     LD+  + RW MP +PD+L++PS+LA FA
Sbjct:   64 FSPSSLQTPGQKIDIVSHPVTPSKSYATRKNAGDITLEMRAKIEVPTDSPGKEINGMSRQP--------CHINVFGEPGSPAPESDSSHESVGVASHYRHMYTTVMDRAASLQRSFDHMEQELLAHAGKEHSSRRSPVGVRSQDPVVCFGRVCCDTLGEGKINKTSILLEGGRMEGGQRIELKLQDLSSF-ALFPGQWVLVEGINSSGPRMVVKRLMTGVPRPLPQAQITKKRT----------SPLRLVVASGPFCCTNNLDYAPLKDLL--LNANSADVLILSGPFVDVAHPQLKSGVVLMAGDTDDGATCEMESLDYCNLFNLKVTQALEDMQDAHPSSTLQIVMVPSLADAFHDCVYPQPPLTDQSRKGVKSPW--FPEEKYFDVEIPFAAQTEVTG-------------KRMHLVSNPAMLRINEVVVGISSTDILMSMGRAEIAENPKNKQRLPRLAEHLVNQQSFFPLFPANGGVKANEDVPLDLSQSERWRMPVSPDILILPSKLATFA 544          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10916.817.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTZ2_ECTSI0.000e+090.53DNA polymerase alpha subunit B n=2 Tax=Ectocarpus ... [more]
W7TPC9_9STRA2.880e-11447.19DNA polymerase alpha subunit B n=2 Tax=Monodopsida... [more]
A0A836CA88_9STRA4.510e-11242.67DNA polymerase alpha subunit B n=1 Tax=Tribonema m... [more]
A0A7S2ERG3_9STRA3.880e-8835.94DNA polymerase alpha subunit B n=2 Tax=Ditylum bri... [more]
A0A7S2F9H8_9STRA2.220e-8649.52DNA polymerase alpha subunit B n=1 Tax=Florenciell... [more]
B8BYS5_THAPS3.950e-8635.28DNA polymerase alpha subunit B n=1 Tax=Thalassiosi... [more]
A0A1Z5K576_FISSO2.770e-8239.47DNA polymerase alpha subunit B n=1 Tax=Fistulifera... [more]
A0A1Z5KI39_FISSO4.290e-8236.99DNA polymerase alpha subunit B n=1 Tax=Fistulifera... [more]
A0A7S4EDL8_9STRA1.320e-8035.38DNA polymerase alpha subunit B n=1 Tax=Pelagomonas... [more]
A0A7S2FH66_9STRA1.190e-7935.98DNA polymerase alpha subunit B n=1 Tax=Dictyocha s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10916contigEcto-sp13_S_contig10916:1..5094 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score972.2
Seed ortholog evalue1e-280
Seed eggNOG ortholog2880.D8LTZ2
Preferred namePOLA2
Model size1740
KEGG rclassRC02795
KEGG koko:K02321
KEGG ReactionR00375,R00376,R00377,R00378
KEGG Pathwayko00230,ko00240,ko01100,ko03030,map00230,map00240,map01100,map03030
KEGG ModuleM00261
GOsGO:0000082,GO:0000228,GO:0000278,GO:0000428,GO:0000723,GO:0000785,GO:0000790,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005657,GO:0005658,GO:0005694,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006269,GO:0006270,GO:0006271,GO:0006273,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0012505,GO:0016043,GO:0016070,GO:0016233,GO:0018130,GO:0019438,GO:0019725,GO:0022402,GO:0022616,GO:0030880,GO:0030894,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032200,GO:0032201,GO:0032774,GO:0032991,GO:0032993,GO:0033260,GO:0034641,GO:0034645,GO:0034654,GO:0042592,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043596,GO:0043601,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044770,GO:0044772,GO:0044786,GO:0044843,GO:0046483,GO:0046982,GO:0046983,GO:0051276,GO:0055029,GO:0060249,GO:0061695,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:1901360,GO:1901362,GO:1901576,GO:1902292,GO:1902295,GO:1902315,GO:1902318,GO:1902494,GO:1902969,GO:1902975,GO:1902981,GO:1903047,GO:1990234
Exons7
EggNOG free text desc.DNA-directed DNA polymerase activity
EggNOG OGsCOG5214@1,KOG1625@2759
Ec32 ortholog descriptionDNA polymerase alpha/epsilon, subunit B
Ec32 orthologEc-12_003800.1
Cds size1728
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03032
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10916.817.1prot_Ecto-sp13_S_contig10916.817.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig10916 13..5094 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462563.2467563-UTR-Ecto-sp13_S_contig10916:0..121681462563.2467563-UTR-Ecto-sp13_S_contig10916:0..12Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig10916 1..12 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462563.2619708-CDS-Ecto-sp13_S_contig10916:12..1761681462563.2619708-CDS-Ecto-sp13_S_contig10916:12..176Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10916 13..176 +
1681462563.2731564-CDS-Ecto-sp13_S_contig10916:1771..19841681462563.2731564-CDS-Ecto-sp13_S_contig10916:1771..1984Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10916 1772..1984 +
1681462563.2838445-CDS-Ecto-sp13_S_contig10916:2219..24061681462563.2838445-CDS-Ecto-sp13_S_contig10916:2219..2406Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10916 2220..2406 +
1681462563.295109-CDS-Ecto-sp13_S_contig10916:3203..33421681462563.295109-CDS-Ecto-sp13_S_contig10916:3203..3342Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10916 3204..3342 +
1681462563.3048997-CDS-Ecto-sp13_S_contig10916:3617..39911681462563.3048997-CDS-Ecto-sp13_S_contig10916:3617..3991Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10916 3618..3991 +
1681462563.3217824-CDS-Ecto-sp13_S_contig10916:4122..43111681462563.3217824-CDS-Ecto-sp13_S_contig10916:4122..4311Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10916 4123..4311 +
1681462563.3331914-CDS-Ecto-sp13_S_contig10916:4632..50941681462563.3331914-CDS-Ecto-sp13_S_contig10916:4632..5094Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10916 4633..5094 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig10916.817.1

>prot_Ecto-sp13_S_contig10916.817.1 ID=prot_Ecto-sp13_S_contig10916.817.1|Name=mRNA_Ecto-sp13_S_contig10916.817.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=576bp
MSSWAGFETEVAKSKAAASTPTASAGTASTPSAASRSSSRPPSASIVTPR
PAGRRVVNTVTSEDLASSGTKRPMLPFSSPDPKARSKLARQDGVGGDGAS
LSPTSVQSPPDLVRAVYSSRKNAGQKTTSYNPALGLRGLSVAPSPRQAGT
RCDVVVDGAVGAPARYRYMYTPLEERAAALEKGLVALQGQMERRFGLTEI
TPVGVPRQEQVVTVGRVCCESTEGKINRASILLEXXXXXXXXXXXXXXXX
XXXXXALFPGQVVAVQGVNGSGGRMVARGIIDGVPRPLPSSRPSDLLRVQ
HGADLGGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMG
PFVDAEHPKVASGDATIECVDGGSESVDFETLFRLRLSEKLDTLFADDRD
LPTQFVLVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLDV
PKTGVRTTSGGGGGGGSAAAARQKRVHLAPNPAWLRVNEVTIGVSSTDAL
FDLSGDEVSAGGKGTNRLARLAGHLLQQQSFYPLFPPPAGSAAQLDMRHA
HRWGMPATPDVLLVPSRLAQFARQVQ
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mRNA from alignment at Ecto-sp13_S_contig10916:1..5094+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig10916.817.1 ID=mRNA_Ecto-sp13_S_contig10916.817.1|Name=mRNA_Ecto-sp13_S_contig10916.817.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5094bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10916:1..5094+ (Ectocarpus species13 EcNAP12_S_4_19m)
AGCAGGCTGGGGATGTCCTCCTGGGCAGGCTTCGAGACCGAGGTCGCGAA GAGCAAGGCGGCGGCGTCGACACCCACCGCCTCCGCCGGTACCGCGAGCA CGCCGTCTGCTGCTTCTCGGAGCAGCAGCAGACCTCCTAGTGCGTCGATC GTGACGCCGCGCCCGGCTGGCCGAAGGTATGGGTATGCGCGAATGCTACT GTAGGGGGGGCGGAGATGGACCTCGCGCCCAATGTGTGTGAGTTTGCGCC AACTCTGTTCAAATTGTTGTGCTGGTGTGTGACCAGGGGGGGGGAAGCTG GAACGTCTATCATGTGCTTCCATACAGCGGTACATAGCTTGGTTCTATCG AGACGAAAGTGAAGACAAAGCTGGCTCGTGAAACTCTCACCGCCATCACC CCGGCGAAAGGCGCAGCTCAAATTTCGTCTGGCCATCGCGCGTTGTGTGT TGCGTTGCCCAAATTGCAAATTGCCACCCCACGGCTTATGCACGAAGGCA ACAGCTATGCGTACAATGTATTGCCATCGACCGCAAGTCGTAGCTTAGAG AAAGTACGCCGACATGGTATGATTGTTAGGCCACAACACCAAGCACTCTC AACAGGCAGTATGTCCTGGCCGTGATTGCTGGCGCCGCCAGGGCAGTCGC AACATGATACATGCTCGCTTCGAAGGTTGAGCTATACCATCGGCGGTTTT GCCGTGGTGTCCTTACACGCGAAGTCGTGCAGGGCTCCCTAGGGAGCAAC AGATGATTCGTATTCCAGAAAAACAGATGTTTCGCATGATCGCGTTTGCA GAAGCAGGGTCCTTTGGCGGGTAGCAGTCAAAGAAGAACGTTTCTCGTGG CACGGCGGGAGCACCTGTGTACCAGGGGCCGTATGGCCGCTCCTCACGCG CCACCGTTCCGTGCGGCACTCCCGCCTTCCTCCCGTTCGCCCTCGCTAAA GGTCCGAACCTCGCCGCCGTTCCTCGCACCACGAAAACAACTGAAGGTGC TGCTGGCCTCCGGTCCACGCTGTAGACGATTCTCCTCTCGCTGTTGTTAA CGCCTGTTTTCTTCCTCGAAGTGTCCGTTGGTATGGGAGTTGGGCGGGTG CAGGCGCAGGTGCACCTGGTGCGACTGCTGCTGCTTCTGCAGCTGCTGTC GCAGCAGGTCCTCCCGCCTTGCCCCTGCCCGACTGCCGTGCTAACGCACA CTTTAAGGAAGACAACATGCGCTCATAGCAGCGAGGAGTGTCGTCTACAG CGTGGTTGCGGGGTACAGCAGTACCTTCAGGTATTGGTGGTGCGAGCAGC GGCGGCGAGGCACTGACCCCAGCATGGTGGACCGGGGCATGTTCTGGAGG CTTGGTCGATATGTGTGGGAGAATCCTGTAGGTCGTGTTTCTGCACGTGC GTGGCGCGTACCCCGTACTACTTCCCTGCGGTATGCATATACAGCTTCTG CGGTTCCGCAATGCCGCGGCTGCAACGCTGCAGCAGCAGCAGCATGTCCC AAGTCGACCACATGGCTATCAACCACACGCCTGAGCGAGACCCATTTTTT ACCATCCCTGGCCCCGTCAACCAACTCTCACGTGCAACGTCATCCCCCCC CCCCCGTCCGCCCGTCTGCCGCCCCCCCAACTCTCCCTCCCAAACCAACG GAACCACGAGCACATCGGGGTGAGCAGGACGAGAGTCATCGCCCCCTCGA ATCCCTCATCCCCACCGCTTACCACCCCCGCCCCTCCTCGGCCCAACCCA ACAATGCACCTTAACTTCCAGGGTGGTGAACACCGTCACCTCGGAGGACC TCGCTTCCTCCGGGACCAAGCGGCCGATGCTGCCGTTCTCCAGCCCGGAC CCCAAGGCGAGGAGCAAGCTGGCTCGACAGGACGGGGTGGGCGGGGACGG GGCCAGCCTGTCGCCGACGTCGGTGCAGTCCCCGCCGGACCTGGTGCGGG CCGTGTACTCCTCGCGCAAGAACGCGGGGCAAAAGTGAGTCAGGACGGAC GATGTGCATGCTTGTCTTGGTTTTGTGTTAATTGTTTACGCGCACGGGCC GCGGTTTGGATCGGAAATATTGGCGTACCCACTCTAAAACGACAGTTTTT TGGGGTGCGCGCGTGGGTAGCCAGAAGCAGAGAACAGCGTGCATCCGTTT GCCTCGCAGCGTGCGGCCTACCGTGCCCGATGCGATCCCAACCGCGCTGC TTCGCGCACCTACGTGCAGGACGACGTCTTACAACCCAGCCCTGGGGCTT CGGGGGCTGTCGGTGGCCCCCTCCCCGCGGCAAGCCGGCACCCGGTGCGA CGTGGTGGTGGACGGGGCTGTGGGCGCGCCGGCGCGGTACAGGTACATGT ACACGCCGCTGGAGGAGAGAGCCGCCGCGCTCGAGAAGGGCCTCGTGGCC TTGCAGGTGTGTGTGTTTGTGTGTAGTTTGAGTTGGCATCAACCGCGCGA ACGGGCGGACCTAATGAAGAAGACGTTGGTCTTGCAGCGGGATAAGAAAA CGCGAGCACGTTTGCTGTGGTGTGTGTGTGTGTGCTCGGCTGTTTGTGGC GTTGTGGGTGTTTCCGATGGCGGCAAAGGATGCCATACGAGTGTGTTGGC TGTGTTGACCCCTAAGGGTGGCGTGGTGTGGTGTCGAGTTCCGAAGGGAA TTTTTTGAGGGCGGCTTCCTTTCCTCGTCCCCCTGTTTTTTCGCCTCTCC ACGACGACATACCCACACAGGTTGCTACGCGTGCCGTTTCGTTGAGTGTG TTGCTGCTGCTTGTTCTCCGCCTTCTTGGTGGCGTCTGCCGCAGTCGACG GCGGTGTACTTCTCCCCTCCCGGCCGTCGCGGCCTTGCTTCGCTGCTTCG CACCTGCATGGCGGATTTCCTGGTAGCCACTAGCTGTATGCATTCTTCGA TCGCGAGCCTTCGCTCGCGAGCGTTCAAGGACAAAATGTCTTCAAGATCG CAGGCGGGCTTTTTTCGTCTTGTCGTGCCACACCCGGATACGATTCGCGG CGCTCTTGCTGCCCAGGGGTCCGTCCGTCTTGTGGCCACACAAGGCGGAT GAACGAGGCAATCCTCATCAAAAGACCACGCAATGAACCAACCGTGTCGC GGCAACCGCGTTATGCGTGTCCGAAGGCTTGGCGTTAAAAATGCGCATTT GAATCACTACTGCGGCATTGACGGCGATGTTGCTTGGTCTCGCGCGTTTT CAGGGCCAGATGGAGAGGCGATTCGGGCTGACGGAGATCACTCCCGTCGG GGTGCCGAGGCAGGAGCAGGTGGTGACGGTGGGGCGCGTCTGCTGCGAGT CGACGGAGGGCAAGATCAATCGCGCGTCTATCCTGCTGGAGGTAAATGGC GGCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCCTCTTCCCCGGCCAGGTC GTGGCCGTCCAGGGCGTCAACGGCTCCGGCGGCCGCATGGTGGCCCGCGG GATCATCGACGGAGTGCCTCGCCCTCTCCCGTCCTCGCGACCCTCCGACC TCCTCCGCGTCCAGCACGGGGCGGATCTCGGCGGCGGGAAGGCGCTCTCC ATCTTCGCCGCGGCCGGCCCGTTCACGACCAGCGACAGCCTCGTGTACGA GCCGCTGAACGACCTACTGGGGGCGGTGAGGGCGGCGCGGCCGGACGTGG TGGTGCTCATGGGGCCCTTCGTGGACGCCGAGCACCCCAAGGTACGCTCA TCGCGTATGTGCGTTATCTATCGGGTGGCGATGGCGACCGCTATGTTTCG GTAGGCTCTTGTCTTCCGCGGCGTGCACATGTTTGACTACTAAATACCAT CACCACCACCACCCCACAACAGGTGGCCAGCGGAGACGCGACGATCGAGT GCGTCGACGGCGGTTCGGAGTCGGTGGACTTCGAGACCCTGTTCCGCCTC CGCCTGTCGGAGAAGCTGGACACGCTCTTCGCCGACGACAGGGACCTGCC TACACAGTTCGTCCTGGTGCCGTCATTGAGGGACGTCTTTCACGAGTTCG TCTACCCGCAGGTGTGTCGTGCTGTTAACGTGTCTTGATTCTTCACTATC TGCTGCCGGTTTGTGTATGTTGGAGGCATGGTTGCGTGGCGTGCGGGGGG GTGTCTGCGGGAATAATACCCGCAGTTTTGTCGTCATGCTGTAAAATTCC ACGAAGTCCCAACCACACCGCACCGCACACGTTGGCTCCTCACTGAATGA CTCCCGACAAGCGTGCCTCGCGCTGGTAAACCACCGAGCGCTCAACACCC CCCCCCACCCCGACCCCCCAGCACCGTTTTGACCCCTCCCCCCCCCCTAC TACCTTCCAACTCGCTGCACGCCCGCAAGTAGCCCCCTTTCCACGACCGC GTGGAAGGAGGCGTCGAGCTCGGTGTCGGGGCGTACCCGGAAGAGCGCAT GTTCGTGCTCGACGTGCCCAAGACAGGAGTAAGAACAACAAGCGGAGGCG GAGGCGGCGGCGGCTCCGCCGCCGCCGCGCGGCAGAAGCGGGTTCACCTC GCGCCGAACCCGGCGTGGCTGCGCGTGAACGAGGTTACGATCGGGGTGTC CTCGACGGACGCCCTGTTCGACCTGTCGGGGGACGAGGTCAGCGCCGGAG GCAAGGGCACCAACAGGCTGGCGAGGCTCGCGGGCCACCTGCTGCAGCAG CAGTCGTTCTACCCGCTCTTCCCGCCCCCCGCGGGCTCGGCGGCGCAGCT CGACATGCGCCACGCGCACCGCTGGGGCATGCCGGCCACACCCGACGTGC TGCTCGTGCCGTCCAGGCTGGCGCAGTTCGCGCGACAAGTGCAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10916:1..5094+

>mRNA_Ecto-sp13_S_contig10916.817.1 ID=mRNA_Ecto-sp13_S_contig10916.817.1|Name=mRNA_Ecto-sp13_S_contig10916.817.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1728bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10916:1..5094+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCCTCCTGGGCAGGCTTCGAGACCGAGGTCGCGAAGAGCAAGGCGGC
GGCGTCGACACCCACCGCCTCCGCCGGTACCGCGAGCACGCCGTCTGCTG
CTTCTCGGAGCAGCAGCAGACCTCCTAGTGCGTCGATCGTGACGCCGCGC
CCGGCTGGCCGAAGGGTGGTGAACACCGTCACCTCGGAGGACCTCGCTTC
CTCCGGGACCAAGCGGCCGATGCTGCCGTTCTCCAGCCCGGACCCCAAGG
CGAGGAGCAAGCTGGCTCGACAGGACGGGGTGGGCGGGGACGGGGCCAGC
CTGTCGCCGACGTCGGTGCAGTCCCCGCCGGACCTGGTGCGGGCCGTGTA
CTCCTCGCGCAAGAACGCGGGGCAAAAGACGACGTCTTACAACCCAGCCC
TGGGGCTTCGGGGGCTGTCGGTGGCCCCCTCCCCGCGGCAAGCCGGCACC
CGGTGCGACGTGGTGGTGGACGGGGCTGTGGGCGCGCCGGCGCGGTACAG
GTACATGTACACGCCGCTGGAGGAGAGAGCCGCCGCGCTCGAGAAGGGCC
TCGTGGCCTTGCAGGGCCAGATGGAGAGGCGATTCGGGCTGACGGAGATC
ACTCCCGTCGGGGTGCCGAGGCAGGAGCAGGTGGTGACGGTGGGGCGCGT
CTGCTGCGAGTCGACGGAGGGCAAGATCAATCGCGCGTCTATCCTGCTGG
AGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNGCCCTCTTCCCCGGCCAGGTCGTGGCCGTCCAGGG
CGTCAACGGCTCCGGCGGCCGCATGGTGGCCCGCGGGATCATCGACGGAG
TGCCTCGCCCTCTCCCGTCCTCGCGACCCTCCGACCTCCTCCGCGTCCAG
CACGGGGCGGATCTCGGCGGCGGGAAGGCGCTCTCCATCTTCGCCGCGGC
CGGCCCGTTCACGACCAGCGACAGCCTCGTGTACGAGCCGCTGAACGACC
TACTGGGGGCGGTGAGGGCGGCGCGGCCGGACGTGGTGGTGCTCATGGGG
CCCTTCGTGGACGCCGAGCACCCCAAGGTGGCCAGCGGAGACGCGACGAT
CGAGTGCGTCGACGGCGGTTCGGAGTCGGTGGACTTCGAGACCCTGTTCC
GCCTCCGCCTGTCGGAGAAGCTGGACACGCTCTTCGCCGACGACAGGGAC
CTGCCTACACAGTTCGTCCTGGTGCCGTCATTGAGGGACGTCTTTCACGA
GTTCGTCTACCCGCAGCCCCCTTTCCACGACCGCGTGGAAGGAGGCGTCG
AGCTCGGTGTCGGGGCGTACCCGGAAGAGCGCATGTTCGTGCTCGACGTG
CCCAAGACAGGAGTAAGAACAACAAGCGGAGGCGGAGGCGGCGGCGGCTC
CGCCGCCGCCGCGCGGCAGAAGCGGGTTCACCTCGCGCCGAACCCGGCGT
GGCTGCGCGTGAACGAGGTTACGATCGGGGTGTCCTCGACGGACGCCCTG
TTCGACCTGTCGGGGGACGAGGTCAGCGCCGGAGGCAAGGGCACCAACAG
GCTGGCGAGGCTCGCGGGCCACCTGCTGCAGCAGCAGTCGTTCTACCCGC
TCTTCCCGCCCCCCGCGGGCTCGGCGGCGCAGCTCGACATGCGCCACGCG
CACCGCTGGGGCATGCCGGCCACACCCGACGTGCTGCTCGTGCCGTCCAG
GCTGGCGCAGTTCGCGCGACAAGTGCAG
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