prot_Ecto-sp13_S_contig10821.739.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10821.739.1
Unique Nameprot_Ecto-sp13_S_contig10821.739.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length87
Homology
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BLAST of mRNA_Ecto-sp13_S_contig10821.739.1 vs. uniprot
Match: A0A6H5J9V8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9V8_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 5.650e-12
Identity = 40/88 (45.45%), Postives = 54/88 (61.36%), Query Frame = 0 
Query:    2 HCLPLLHLAAGRYDLAEKFLRQELSEVEDVPRVFADHGDVRQRQVLLGRFTAE--LAVVLEKKGKFDEAELLLERSVAFGMEELGPEH 87
            + LP + L AG+YDLAEK  RQEL++ E   R F DH     R+ + G  TA   LA VLEK+GKF+EAE +   S++   +  GP+H
Sbjct:  276 YVLPDVQLDAGQYDLAEKSHRQELADAEHEAREFEDHDSEESRRAMHGENTARSRLAHVLEKQGKFEEAETIYRHSMSILKKTHGPDH 363
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BLAST of mRNA_Ecto-sp13_S_contig10821.739.1 vs. uniprot
Match: D7G1L3_ECTSI (Kinesin light chain-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L3_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 1.960e-11
Identity = 40/89 (44.94%), Postives = 52/89 (58.43%), Query Frame = 0 
Query:    1 GHCLPLLHLAAGRYDLAEKFLRQELSEVEDVPRVFADHGDVRQRQVL--LGRFTAELAVVLEKKGKFDEAELLLERSVAFGMEELGPEH 87
            G+ LP L LAAG YDLAEK  RQ L++ E+  R   DH     R  L       + LA VL+K+GK++EAE L  RS+A   +  GP+H
Sbjct:  277 GYVLPDLQLAAGEYDLAEKSQRQALTDAENEVREVEDHDSKESRWALDRENEARSRLATVLDKQGKYEEAETLCVRSLAIDEKVYGPDH 365
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10821.739.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J9V8_9PHAE5.650e-1245.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1L3_ECTSI1.960e-1144.94Kinesin light chain-like protein n=1 Tax=Ectocarpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 2..87
e-value: 9.0E-7
score: 30.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 7..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10821contigEcto-sp13_S_contig10821:1551..2898 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10821.739.1mRNA_Ecto-sp13_S_contig10821.739.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10821 1549..2898 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10821.739.1 ID=prot_Ecto-sp13_S_contig10821.739.1|Name=mRNA_Ecto-sp13_S_contig10821.739.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=87bp
GHCLPLLHLAAGRYDLAEKFLRQELSEVEDVPRVFADHGDVRQRQVLLGR
FTAELAVVLEKKGKFDEAELLLERSVAFGMEELGPEH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf