prot_Ecto-sp13_S_contig10821.738.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10821.738.1
Unique Nameprot_Ecto-sp13_S_contig10821.738.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length204
Homology
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BLAST of mRNA_Ecto-sp13_S_contig10821.738.1 vs. uniprot
Match: A0A6H5JUC1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUC1_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 3.220e-9
Identity = 31/44 (70.45%), Postives = 36/44 (81.82%), Query Frame = 0 
Query:    1 LQGKLTEAESLYERCRAMKEKVLGPEHPSLATTLNNLARLLQRQ 44
            +QGK +EAE LY+RC+AMK K LGPEHPSLA TLNN A LL+ Q
Sbjct:  185 IQGKYSEAEPLYDRCQAMKGKALGPEHPSLAATLNNRAELLRAQ 228
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BLAST of mRNA_Ecto-sp13_S_contig10821.738.1 vs. uniprot
Match: A0A6H5KHN5_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHN5_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 1.780e-8
Identity = 30/42 (71.43%), Postives = 38/42 (90.48%), Query Frame = 0 
Query:    1 LQGKLTEAESLYERCRAMKEKVLGPEHPSLATTLNNLARLLQ 42
            L+GK  EAE+LY +C+A++EKVLGPEHPSLATTL+NLA LL+
Sbjct: 1763 LKGKYAEAEALYAQCQAIEEKVLGPEHPSLATTLHNLADLLR 1804
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BLAST of mRNA_Ecto-sp13_S_contig10821.738.1 vs. uniprot
Match: A0A6H5JJK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK0_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 1.390e-7
Identity = 29/44 (65.91%), Postives = 36/44 (81.82%), Query Frame = 0 
Query:    1 LQGKLTEAESLYERCRAMKEKVLGPEHPSLATTLNNLARLLQRQ 44
            ++GK T+AE LYERC+A+ EK LGPEHP +ATTLNN A LL+ Q
Sbjct:  939 IKGKYTDAEPLYERCQAIYEKRLGPEHPYVATTLNNRAGLLEAQ 982
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BLAST of mRNA_Ecto-sp13_S_contig10821.738.1 vs. uniprot
Match: UPI0013D29528 (tetratricopeptide repeat protein n=1 Tax=Desulfobacter hydrogenophilus TaxID=2291 RepID=UPI0013D29528)

HSP 1 Score: 55.1 bits (131), Expect = 6.830e-7
Identity = 26/39 (66.67%), Postives = 31/39 (79.49%), Query Frame = 0 
Query:    2 QGKLTEAESLYERCRAMKEKVLGPEHPSLATTLNNLARL 40
            QGK  EAE LY+R   ++E VLGP+HPS+ATTLNNLA L
Sbjct:    4 QGKYEEAEPLYQRALKIRETVLGPDHPSVATTLNNLAGL 42
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BLAST of mRNA_Ecto-sp13_S_contig10821.738.1 vs. uniprot
Match: A0A6H5K3K8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3K8_9PHAE)

HSP 1 Score: 54.7 bits (130), Expect = 7.120e-7
Identity = 26/44 (59.09%), Postives = 34/44 (77.27%), Query Frame = 0 
Query:    1 LQGKLTEAESLYERCRAMKEKVLGPEHPSLATTLNNLARLLQRQ 44
            +QGK  EAE LYER +A++EKVLG EHP +A++LNN   LL+ Q
Sbjct:   17 IQGKYMEAEPLYERSQAIQEKVLGLEHPDVASSLNNRVELLRAQ 60
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BLAST of mRNA_Ecto-sp13_S_contig10821.738.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI)

HSP 1 Score: 59.3 bits (142), Expect = 8.600e-7
Identity = 28/43 (65.12%), Postives = 35/43 (81.40%), Query Frame = 0 
Query:    1 LQGKLTEAESLYERCRAMKEKVLGPEHPSLATTLNNLARLLQR 43
            +QGK  EAE LYER  A++EKVLGPEHP +AT+L+N A LL+R
Sbjct:  692 IQGKYAEAEPLYERSLAIQEKVLGPEHPDVATSLDNRASLLER 734
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BLAST of mRNA_Ecto-sp13_S_contig10821.738.1 vs. uniprot
Match: A0A6H5KMK1_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMK1_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 1.040e-6
Identity = 28/43 (65.12%), Postives = 36/43 (83.72%), Query Frame = 0 
Query:    2 QGKLTEAESLYERCRAMKEKVLGPEHPSLATTLNNLARLLQRQ 44
            QGK TEAE LYER +A++EKVLG EHP +AT+LN+ A+LL +Q
Sbjct:   14 QGKYTEAEPLYERSQAIREKVLGSEHPRVATSLNDRAKLLCKQ 56
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BLAST of mRNA_Ecto-sp13_S_contig10821.738.1 vs. uniprot
Match: D8LL58_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL58_ECTSI)

HSP 1 Score: 58.2 bits (139), Expect = 2.090e-6
Identity = 26/41 (63.41%), Postives = 33/41 (80.49%), Query Frame = 0 
Query:    1 LQGKLTEAESLYERCRAMKEKVLGPEHPSLATTLNNLARLL 41
            LQGK  EAE LY+RC+A+ E+ LGPEHPS+ATTL+  A L+
Sbjct:  653 LQGKFAEAEELYDRCQAINEEALGPEHPSVATTLHGRAGLM 693
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BLAST of mRNA_Ecto-sp13_S_contig10821.738.1 vs. uniprot
Match: D7FXH0_ECTSI (Tetratricopeptide repeat containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXH0_ECTSI)

HSP 1 Score: 58.2 bits (139), Expect = 2.110e-6
Identity = 27/42 (64.29%), Postives = 32/42 (76.19%), Query Frame = 0 
Query:    3 GKLTEAESLYERCRAMKEKVLGPEHPSLATTLNNLARLLQRQ 44
            G   EAE+LY RC+A++EKVLGPEHPSLATTL  L   L +Q
Sbjct:  959 GNYAEAEALYSRCQAIEEKVLGPEHPSLATTLEKLGVALYKQ 1000
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BLAST of mRNA_Ecto-sp13_S_contig10821.738.1 vs. uniprot
Match: A0A6H5LJA6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJA6_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 6.070e-6
Identity = 26/38 (68.42%), Postives = 32/38 (84.21%), Query Frame = 0 
Query:    1 LQGKLTEAESLYERCRAMKEKVLGPEHPSLATTLNNLA 38
            +QGK TEAE LY R +A++EKVLGPEHP +AT+LNN A
Sbjct:  433 IQGKFTEAEPLYGRSQAIQEKVLGPEHPDVATSLNNRA 470
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10821.738.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A6H5JUC1_9PHAE3.220e-970.45Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KHN5_9PHAE1.780e-871.43CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JJK0_9PHAE1.390e-765.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI0013D295286.830e-766.67tetratricopeptide repeat protein n=1 Tax=Desulfoba... [more]
A0A6H5K3K8_9PHAE7.120e-759.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G722_ECTSI8.600e-765.12NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KMK1_9PHAE1.040e-665.12Integrase catalytic domain-containing protein (Fra... [more]
D8LL58_ECTSI2.090e-663.41NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D7FXH0_ECTSI2.110e-664.29Tetratricopeptide repeat containing protein n=1 Ta... [more]
A0A6H5LJA6_9PHAE6.070e-668.42NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]

Pages

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002151Kinesin light chainPRINTSPR00381KINESINLIGHTcoord: 27..44
score: 55.0
coord: 106..127
score: 36.82
coord: 71..91
score: 50.0
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 73..106
e-value: 29.0
score: 10.9
coord: 115..148
e-value: 0.55
score: 19.3
coord: 31..64
e-value: 0.021
score: 24.0
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 152..185
score: 5.546
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 73..106
score: 5.812
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 115..148
score: 8.113
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 31..64
score: 7.316
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 163..204
e-value: 4.7E-10
score: 40.9
coord: 1..162
e-value: 3.1E-55
score: 188.8
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 25..156
NoneNo IPR availablePFAMPF13374TPR_10coord: 166..191
e-value: 1.6E-8
score: 34.2
NoneNo IPR availablePFAMPF13424TPR_12coord: 71..147
e-value: 2.5E-15
score: 56.5
coord: 2..62
e-value: 3.2E-18
score: 65.8
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 68..200
coord: 1..113
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 68..200
coord: 1..113
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 31..185
score: 15.358

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10821contigEcto-sp13_S_contig10821:81..1308 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10821.738.1mRNA_Ecto-sp13_S_contig10821.738.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10821 81..1308 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10821.738.1 ID=prot_Ecto-sp13_S_contig10821.738.1|Name=mRNA_Ecto-sp13_S_contig10821.738.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=204bp
LQGKLTEAESLYERCRAMKEKVLGPEHPSLATTLNNLARLLQRQGKFAKA
EPLYRRATEIWERALGLEHPDVAVALNNWTILLVKQGKLEKAIEVKRKGL
AIEERVLPPDHPQKASSLSNLASLMESQGNYDDAKPLYERSLAMSKKVMG
PDHPDVTTGLNIMGGGKYDEAERLYERSLAIRERALGPRHPVVAQSLNNR
AGLW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002151Kinesin_light
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom