prot_Ecto-sp13_S_contig10810.730.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10810.730.1
Unique Nameprot_Ecto-sp13_S_contig10810.730.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length374
Homology
BLAST of mRNA_Ecto-sp13_S_contig10810.730.1 vs. uniprot
Match: A0A6H5JJ70_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ70_9PHAE)

HSP 1 Score: 445 bits (1144), Expect = 9.830e-152
Identity = 296/350 (84.57%), Postives = 303/350 (86.57%), Query Frame = 0
Query:   25 IAPSSASPTESLTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTPVAPVAGATSNCENGYAGWQNNEACCSEFCGQCGGSGCGELGSATCCYDNIINAGLVCGVDVLEAPCIIINFTPAPLAEGETAAPLPAPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVATESPVSRGDVGVPTPSPGGLEAPQESVAPYVTPPVGGGVGTTPAPSTPECDDSIVGFRHGVACCSVSCGQCGGAGCENLEGGASECCSHDVLATNNLCSETGVAPCVLGPVSEVDGAADADTTTSSGGGTNRIAGGGRG-RVLLVLPWAVSALLNAAGFRRLYNY 373
            IAPSS SPTESLTA              XXXXXXXXXXXXXXXXXXX   FTPVAPVAGA+S CENGY GWQ+NEACCSEFCGQCGGSGCGELGSATCCYDNII+AGLVCGVDVLEAPCIIIN+TPAPLAEG TA   PA   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       VATESPVSRGDVGVPTPSPGG EAPQESV P VTPPVGG VGTTPAPS PECDD I GFRHGVACCSVSCGQCGGAGCENLEGGASECCSHDVLATNNLCSE+GVAPCVLGPVS+VDGAADADTTTSSG   NRIAGGGRG RVLLVLPWAVSAL+N AGFR LYNY
Sbjct:  128 IAPSSTSPTESLTATAQPAAAPVVVAAPXXXXXXXXXXXXXXXXXXXAGSFTPVAPVAGASSYCENGYPGWQSNEACCSEFCGQCGGSGCGELGSATCCYDNIISAGLVCGVDVLEAPCIIINYTPAPLAEGVTA---PATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------VATESPVSRGDVGVPTPSPGGSEAPQESVPPSVTPPVGGAVGTTPAPSAPECDDGIEGFRHGVACCSVSCGQCGGAGCENLEGGASECCSHDVLATNNLCSESGVAPCVLGPVSQVDGAADADTTTSSGEAANRIAGGGRGVRVLLVLPWAVSALINTAGFR-LYNY 466          
BLAST of mRNA_Ecto-sp13_S_contig10810.730.1 vs. uniprot
Match: D7G8G7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8G7_ECTSI)

HSP 1 Score: 442 bits (1137), Expect = 1.170e-150
Identity = 267/300 (89.00%), Postives = 270/300 (90.00%), Query Frame = 0
Query:   75 FTPVAPVAGATSNCENGYAGWQNNEACCSEFCGQCGGSGCGELGSATCCYDNIINAGLVCGVDVLEAPCIIINFTPAPLAEGETAAPLPAPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVATESPVSRGDVGVPTPSPGGLEAPQESVAPYVTPPVGGGVGTTPAPSTPECDDSIVGFRHGVACCSVSCGQCGGAGCENLEGGASECCSHDVLATNNLCSETGVAPCVLGPVSEVDGAADADTTTSSGGGTNRIAGGGRG-RVLLVLPWAVSALLNAAGFRRLYNY 373
            FTPVAPVAGATSNCENGYAGWQNNEACCSEFCGQCGGSGCGELGSATCC+DNIINAG VCGVDVLEAPCIIINFTPAPLAEGETAAPLPAPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXX     XXXXXXX ATESPVSRG VG PT SPGG EAPQESVA     PVGGGVGTTPAPSTPEC D I GFRHGVACCSVSCGQCGG GCE LEGGA ECCSHDVL TN+ CSETG APCVLGPVSEVDGAADADTTTSSG   NRIAGGGRG RVLLVLPWAVSA+LNAAGFR LYNY
Sbjct:  169 FTPVAPVAGATSNCENGYAGWQNNEACCSEFCGQCGGSGCGELGSATCCFDNIINAGKVCGVDVLEAPCIIINFTPAPLAEGETAAPLPAPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAETEXXXXXXXXATESPVSRGGVGTPTSSPGGSEAPQESVAXXXXXPVGGGVGTTPAPSTPECADGIEGFRHGVACCSVSCGQCGGTGCEYLEGGALECCSHDVLTTNSSCSETGEAPCVLGPVSEVDGAADADTTTSSGRAANRIAGGGRGGRVLLVLPWAVSAMLNAAGFR-LYNY 467          
BLAST of mRNA_Ecto-sp13_S_contig10810.730.1 vs. uniprot
Match: D7FZM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZM1_ECTSI)

HSP 1 Score: 125 bits (313), Expect = 6.390e-28
Identity = 91/258 (35.27%), Postives = 119/258 (46.12%), Query Frame = 0
Query:   76 TPVAPVAGAT-----SNCENGYAGWQNNEACCSEFCGQCGGSGCGEL----GSATCCYDNII--NAGLVCGVDVLEAPCIIINFTPAPL--AEGETAAPL-PAPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVATESPVSRGDVGVPTPSPGGLEAPQESVAPYVTPPVGGGVGTTPAPSTPECDDSIVGFRHGVACCSVSCGQCGGAGCENLEG--GASECCSHDVLATNNLCSETGVAPCVL 317
            T  +P AGA+     S C NG  G  + + CC E CGQCGG GCG +    G++ CC D I   + G+ CG    EAPC++  FTP+PL  A   TAAP+ P+  S                                            + V  G+      +P  +E        Y   P   G GTT    T  C + I+G++ G ACC+ +CGQCGG GC ++ G  GAS CCS DV    NLCS TGV+PCV+
Sbjct:  275 TSTSPTAGASDPVAPSTCSNGIPGVSDGDVCCLEACGQCGGEGCGAIAGTNGASDCCPDTIKEESGGVFCG----EAPCVMAGFTPSPLNPAFDGTAAPVAPSTCSNGIAGYQDGAICCLEICGRCGGDGCGTIPGTGGSDNCCPSTILAAGVVCGE------APCIIEG-------YTPAPAVVGGGTTAPYGTSTCSNGILGYQDGPACCAANCGQCGGGGCGSVPGTAGASACCSSDVELAGNLCSATGVSPCVI 515          
BLAST of mRNA_Ecto-sp13_S_contig10810.730.1 vs. uniprot
Match: D7FY01_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY01_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 2.730e-10
Identity = 32/78 (41.03%), Postives = 43/78 (55.13%), Query Frame = 0
Query:  259 CDDSIVGFRHGVACCSVSCGQCGGAGCENLEGGASECCSHDVLATNNLCSETGVAPCVLGPVSEVDGAADADTTTSSG 336
            C + + G+ +  ACCSV CG CGG GC  L  GA  CC+ +++A    CSE G APC++          D D T S+G
Sbjct:  381 CSNGLAGYENSGACCSVGCGTCGGEGCSQLGEGAESCCTSNIIAAREPCSEKGAAPCIM----------DTDQTCSNG 448          
BLAST of mRNA_Ecto-sp13_S_contig10810.730.1 vs. uniprot
Match: A0A6H5JP22_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP22_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 5.740e-10
Identity = 30/71 (42.25%), Postives = 41/71 (57.75%), Query Frame = 0
Query:  251 TPAPS----TPECDDSIVGFRHGVACCSVSCGQCGGAGCENLEGGASECCSHDVLATNNLCSETGVAPCVL 317
            TP+P+       C + + G+    ACCSV CG CGG GC  L  GA  CC+ +++A    CSE G APC++
Sbjct:  388 TPSPAPVMEAQTCSNGLAGYEKSGACCSVGCGTCGGEGCSQLGQGAESCCTSNIIAAGEPCSEKGAAPCIM 458          
BLAST of mRNA_Ecto-sp13_S_contig10810.730.1 vs. uniprot
Match: A0A150PLJ6_SORCE (Uncharacterized protein n=1 Tax=Sorangium cellulosum TaxID=56 RepID=A0A150PLJ6_SORCE)

HSP 1 Score: 62.8 bits (151), Expect = 5.080e-7
Identity = 28/53 (52.83%), Postives = 33/53 (62.26%), Query Frame = 0
Query:  265 GFRHGVACCSVSCGQCGGAGCENLEGGASECCSHDVLATNNLCSETGVAPCVL 317
            G + G  CC  SCG CGGAGC    GGAS CC+ ++L  N  C+ T  APCVL
Sbjct:  607 GVQSGNVCCKASCGTCGGAGCSGRPGGASACCTSNILDANKTCTGTN-APCVL 658          
BLAST of mRNA_Ecto-sp13_S_contig10810.730.1 vs. uniprot
Match: A0A835YLW4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLW4_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 1.380e-6
Identity = 35/85 (41.18%), Postives = 44/85 (51.76%), Query Frame = 0
Query:  259 CDDSIVGFRHG--VACCSVSCGQCGGAGCENLEGGASECCSHDVLATNNLCSETGV-APCVL-----GPVSEVDGAADADTTTSS 335
            C   + G   G    CC   CG+CGG GC+N  GGAS+CC+ ++ AT+ LC+ T V APC       GP        D D T SS
Sbjct:   77 CGMDLSGILSGDKSVCCPARCGKCGGTGCQNFPGGASQCCTTNIQATDLLCAGTAVPAPCSFAKTLGGPTVTCATKTDCDLTASS 161          
BLAST of mRNA_Ecto-sp13_S_contig10810.730.1 vs. uniprot
Match: A0A2S1JQZ9_9GAMM (Uncharacterized protein n=1 Tax=Microbulbifer sp. A4B17 TaxID=359370 RepID=A0A2S1JQZ9_9GAMM)

HSP 1 Score: 57.0 bits (136), Expect = 2.780e-5
Identity = 29/59 (49.15%), Postives = 34/59 (57.63%), Query Frame = 0
Query:   88 CENGYAG-WQNNEACCSEFCGQCGGSGCGEL--GSATCCYDNIINAGLVCGVDVLEAPC 143
            CEN   G +  N ACCS FCG CGG GCG+L  GS  CC   I+N+  +C      APC
Sbjct:  375 CENEKGGIYSGNGACCSSFCGACGGPGCGQLNGGSRACCTLEILNSAPLCSYPGQTAPC 433          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10810.730.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5JJ70_9PHAE9.830e-15284.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8G7_ECTSI1.170e-15089.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FZM1_ECTSI6.390e-2835.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FY01_ECTSI2.730e-1041.03Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JP22_9PHAE5.740e-1042.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A150PLJ6_SORCE5.080e-752.83Uncharacterized protein n=1 Tax=Sorangium cellulos... [more]
A0A835YLW4_9STRA1.380e-641.18Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2S1JQZ9_9GAMM2.780e-549.15Uncharacterized protein n=1 Tax=Microbulbifer sp. ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10810contigEcto-sp13_S_contig10810:291..3232 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10810.730.1mRNA_Ecto-sp13_S_contig10810.730.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10810 123..4170 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10810.730.1 ID=prot_Ecto-sp13_S_contig10810.730.1|Name=mRNA_Ecto-sp13_S_contig10810.730.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=374bp
MTTTAPEPTAPAAPAAPAASTTTTIAPSSASPTESLTATAQPAAAAVVVA
APSAQPSVATPTAAVATASPVAGSFTPVAPVAGATSNCENGYAGWQNNEA
CCSEFCGQCGGSGCGELGSATCCYDNIINAGLVCGVDVLEAPCIIINFTP
APLAEGETAAPLPAPTSPAPATAAPATAAPFTVSPDTAAPAPAAPAAETE
APSTPAPVATESPVSRGDVGVPTPSPGGLEAPQESVAPYVTPPVGGGVGT
TPAPSTPECDDSIVGFRHGVACCSVSCGQCGGAGCENLEGGASECCSHDV
LATNNLCSETGVAPCVLGPVSEVDGAADADTTTSSGGGTNRIAGGGRGRV
LLVLPWAVSALLNAAGFRRLYNY*
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