prot_Ecto-sp13_S_contig10751.683.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10751.683.1
Unique Nameprot_Ecto-sp13_S_contig10751.683.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length275
Homology
BLAST of mRNA_Ecto-sp13_S_contig10751.683.1 vs. uniprot
Match: D7FZB3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZB3_ECTSI)

HSP 1 Score: 527 bits (1357), Expect = 3.960e-185
Identity = 261/271 (96.31%), Postives = 265/271 (97.79%), Query Frame = 0
Query:    1 GLVIAVKGTVTASGEMLVDDWCPAGIPPPVPSSPSKKVGGRHDPLLVSLLVDFVAGYLGGVEDQEGTSARIGRVIVCGDSVAAPSADLLSGTGPSKRLNAEQQRLVASPMKELDTILALLAAAAPVDVMPGESDPANYTLPQQPLHPCLLRNASRFGALKRVTNPHEAKIGERLFLGSSGQPLLDMARYTTPDAEADKDAKPVCLRRLEEMLKWRHMAPTAPETLGCYPFVTEDPFVVEECPDIFFAGNQPQFATGILEGADGQKVHRVLC 271
            GLVIAVKGTVTASGEMLVDDWCPAGIPPPVP SPSKKVGGRHDPLLVSLLVDFVAGYLGGVEDQEGTSARIGRVIVCGDSVAAPSA+LLSGTGPSKRLNAEQQRLVASPMKELDTILALLAAAAPVDVMPGESDPANYTLPQQPLHPCLLRNASRFGALKRVTNPHEAKIGER+FLGSSGQPLLDMARYTTP+AEADKDAKP CLRRLEEMLKWRHMAPTAPETLGCYPFVTEDPFVVEECPDIFFAGNQPQFAT ILEGADG K  RV+C
Sbjct:  176 GLVIAVKGTVTASGEMLVDDWCPAGIPPPVPPSPSKKVGGRHDPLLVSLLVDFVAGYLGGVEDQEGTSARIGRVIVCGDSVAAPSAELLSGTGPSKRLNAEQQRLVASPMKELDTILALLAAAAPVDVMPGESDPANYTLPQQPLHPCLLRNASRFGALKRVTNPHEAKIGERVFLGSSGQPLLDMARYTTPEAEADKDAKPACLRRLEEMLKWRHMAPTAPETLGCYPFVTEDPFVVEECPDIFFAGNQPQFATSILEGADGHK-GRVVC 445          
BLAST of mRNA_Ecto-sp13_S_contig10751.683.1 vs. uniprot
Match: A0A835YHI6_9STRA (DNA polymerase alpha/epsilon subunit B-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHI6_9STRA)

HSP 1 Score: 238 bits (608), Expect = 1.640e-71
Identity = 142/330 (43.03%), Postives = 184/330 (55.76%), Query Frame = 0
Query:    1 GLVIAVKGTVTASGEMLVDDWCPAGIPPPVPSSPSKKV---------------GGRHDPLLVSLLVDFVAGYLGGVEDQEGTSARIGRVIVCGDSVAAPSADLL---SGTGPSKRLNAEQQRLVASPMKELDTILALLAAAAPVDVMPGESDPANYTLPQQPLH---------------------------------------------PCLLRNASRFGALKRVTNPHEAKIGERLFLGSSGQPLLDMARYTTP--DAEADKDAKPVCLRRLEEMLKWRHMAPTAPETLGCYPFVTEDPFVVEECPDIFFAGNQPQFATGILEGADGQK 265
            G+V+AV+G+V A G+M V+ WCP G+PP  PS P                   GG  DPL   L +D +AGYLGG  D E   AR+ RV+VCG+S       L    SG+  S +L+AEQQR   +P++E D  LA +A   PVD+MP  SD +NY LPQ+  H                                             PCLL  ASR+   +  TNPHEA +G RL LG++GQPL D+ +YT     A  D+      L+ LE ML+W+H+APTAP+TLGCYPF+TEDPFV+EECP +FFAGNQP+FAT ++EG DGQ+
Sbjct:  175 GIVVAVRGSVRADGDMAVEAWCPPGLPPQ-PSPPEGAAHPPGACLLLVSGMLAGGPQDPLPTRLFLDHLAGYLGGAGDHE-QIARVVRVVVCGNSAXXXXXXLAGAASGSIGSGKLSAEQQRERTAPLRECDAELAQVAV--PVDIMPSASDASNYMLPQRAAHMLFRKRAIQQRKGNIRPNVAAAXXXXXXXXXXXXXXXXXXXXXXHPCLLPLASRYPNARLATNPHEAWVGTRLVLGTAGQPLDDILQYTAAAEGAGGDEGDSARRLQMLENMLRWQHIAPTAPDTLGCYPFLTEDPFVLEECPHVFFAGNQPRFATRLVEGHDGQQ 500          
BLAST of mRNA_Ecto-sp13_S_contig10751.683.1 vs. uniprot
Match: A0A1Y1IIY7_KLENI (DNA polymerase delta regulatory subunit 55 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IIY7_KLENI)

HSP 1 Score: 228 bits (580), Expect = 1.440e-68
Identity = 130/286 (45.45%), Postives = 173/286 (60.49%), Query Frame = 0
Query:    1 GLVIAVKGTVTASGEMLVD-----DWCPAGIPPPVPSS---PSKKVG---------GRHDPLLVSLLVDFVAGYLGGVEDQEGTSARIGRVIVCGDSVAAPSADLLSGTGPSKRLNAEQQRLVASPMKELDTILALLAAAAPVDVMPGESDPANYTLPQQPLHPCLLRNASRFGALKRVTNPHEAKIGERLFLGSSGQPLLDMARYTTPDAEADKDAKPVCLRRLEEMLKWRHMAPTAPETLGCYPFVTEDPFVVEECPDIFFAGNQPQFATGILEGADGQKVHRV 269
            G+V+AV G   A GE  V+     D  P  + PP P++   P + V             DPL   LLVD + G+LGG + Q+  SAR  RV++ GDS+ AP  DLL+G    + L+A +Q    +P++ELD +L  LAAA PVDVMPG +DPANY+LPQQPLHPCL   AS++      TNPH   +    FLG++GQP+ D+ RY   D        P+ L  LE  L+WRH+APTAP+TL CYPF   DPF++  CP ++FAGNQ  FAT +L+G DGQ+V  +
Sbjct:  138 GVVVAVLGVEQADGEFAVEAVLLPDLPPQPLRPPAPAAGVAPPRYVALVSGLGVGAPGVDPLQTQLLVDHLGGHLGGSQAQQ-LSARTVRVVLAGDSLHAPP-DLLTG----QALSAREQAAAVAPIQELDLLLTQLAAALPVDVMPGSTDPANYSLPQQPLHPCLFPGASQYDTFSAATNPHRFSVDGVDFLGTAGQPVADLLRYCGRD-------DPLAL--LESTLRWRHLAPTAPDTLACYPFTDSDPFLLATCPAVYFAGNQAAFATTLLQGTDGQRVRLI 408          
BLAST of mRNA_Ecto-sp13_S_contig10751.683.1 vs. uniprot
Match: A0A7S1XWT2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XWT2_9STRA)

HSP 1 Score: 226 bits (575), Expect = 3.870e-67
Identity = 129/304 (42.43%), Postives = 166/304 (54.61%), Query Frame = 0
Query:    1 GLVIAVKGTVTASGEMLVDDWCPAGIPPPVPSSPSKKV---------------------GGRHDPLLVSLLVDFVAGYLGGVEDQEGTSARIGRVIVCGDSVAAPSADLLSGTGPSKRLNAEQQRLVASPMKELDTILALLAAAAPVDVMPGESDPANYTLPQQPLHPCLLRNASRFGALKRVTNPHEAKIGERLFLGSSGQPLLDMARYTTPDAEADKD------------------AKPVCLRRLEEMLKWRHMAPTAPETLGCYPFVTEDPFVVEECPDIFFAGNQPQFATGILEGADGQK 265
            GL  AV G + A GE +V+DWC  G+PPP+ ++                          GG  DP+  ++LVDFVAG LGG  D+    A I RVI+ G+S+A P  D        K L A  Q  +A P+ +LD +LA LA+A PVDVMPG  D ++  +PQQP H  LL  A R+ +L+R  NP+EA +  RL LGSSGQP+ D+ ++T P A   K                   A    L  LE ML WRHMAPTAP+TL CYPF  EDPFV+E CP +FFAGNQ  F   +++   G K
Sbjct:  170 GLTAAVLGVMGADGEFVVEDWCVPGVPPPLENTNGAVAPKAEPEGDEGPYLLLASGLGFGGATDPMPAAMLVDFVAGRLGGAADRSDVGANICRVILAGNSMA-PLQD--GERLRDKNLPAADQERIAGPLYQLDAMLAQLASACPVDVMPGADDASSVAMPQQPFHRSLLPTACRYSSLQRPPNPYEALVEGRLVLGSSGQPVTDLLKFTRPAAPKPKGENDDGDDEGNATEAEGAAAADFTLSALERMLGWRHMAPTAPDTLPCYPFYNEDPFVLEHCPQVFFAGNQKAFGQRLIDAPGGGK 470          
BLAST of mRNA_Ecto-sp13_S_contig10751.683.1 vs. uniprot
Match: A0A2K1KWA5_PHYPA (Uncharacterized protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KWA5_PHYPA)

HSP 1 Score: 219 bits (558), Expect = 2.840e-65
Identity = 115/283 (40.64%), Postives = 172/283 (60.78%), Query Frame = 0
Query:    1 GLVIAVKGTVTASGEMLVDDWCPAGIPPPVPSSPSK-----------KVGGRH-DPLLVSLLVDFVAGYLGGVEDQEGTSARIGRVIVCGDSVAAPSADLLSGTGPSKRLNAEQQRLVASPMKELDTILALLAAAAPVDVMPGESDPANYTLPQQPLHPCLLRNASRFGALKRVTNPHEAKIGERLFLGSSGQPLLDMARYTTPDAEADKDAKPVCLRRLEEMLKWRHMAPTAPETLGCYPFVTEDPFVVEECPDIFFAGNQPQFATGILEGADGQKVHRVLC 271
            G+V+A+ G     GE  V+D   AG+PP  P   S            K+GG   +PL + LLVD + G+LG V++Q   S++I R+++ G S+     DL +     + ++A+ Q  +  P+KELD  L  ++AA PVD+MPG +DPAN++LPQQPLH CL   A+ +      TNPH+ ++ + LFLG+SGQ + D+++Y+  +   D          +E  L WRH+APTAP+TLGCYPF+  DPF++E CP ++F GNQP +A+ +L G   QKV R++C
Sbjct:  145 GVVVAIVGREEKDGEFFVEDVMVAGLPPQKPLKNSDVDKFVLFVSGLKIGGHGTNPLDLQLLVDHLTGHLGEVQEQS-LSSQIVRMVIAGGSL-----DLQTSISNGQPMSAKNQSKLVEPVKELDLALTQISAAMPVDIMPGANDPANFSLPQQPLHKCLFPGATMYNTFVSATNPHQFELDDVLFLGTSGQNIDDLSKYSEAEDRLDF---------MERTLMWRHLAPTAPDTLGCYPFIDRDPFILETCPHVYFCGNQPHYASRLLTGPSAQKV-RLVC 411          
BLAST of mRNA_Ecto-sp13_S_contig10751.683.1 vs. uniprot
Match: B8LLG4_PICSI (Uncharacterized protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=B8LLG4_PICSI)

HSP 1 Score: 218 bits (556), Expect = 6.080e-65
Identity = 126/286 (44.06%), Postives = 176/286 (61.54%), Query Frame = 0
Query:    1 GLVIAVKGTVTASGEMLVDDWCPAGIPP--PVPSSPSKK------------VGG-RHDPLLVSLLVDFVAGYLGGVEDQEGTSARIGRVIVCGDSVAAPSADLLSGTGPSKRLNAEQQRLVASPMKELDTILALLAAAAPVDVMPGESDPANYTLPQQPLHPCLLRNASRFGALKRVTNPHEAKIGERLFLGSSGQPLLDMARYTTPDAEADKDAKPVCLRRLEEMLKWRHMAPTAPETLGCYPFVTEDPFVVEECPDIFFAGNQPQFATGILEGADGQKVHRVLC 271
            G+V A+ G   + G+  V     AG+PP  P+ S  S K            VG  + +PL   LLVD+V G+ G  E ++  +A+I RVI+ GDSV    + LL+G    + L  ++QR +A P+KELD  L  LAAA PVD+MPG +DPAN++LPQQPLH CL   AS +      TNPH+  +    FLG+SGQ + D+ +Y+  DA+   D        +E  LKWRH+APTAP+TLGCYPF   DPFV+E+CP ++F GNQ ++A+ +LEG++GQ V R++C
Sbjct:  145 GVVAALHGKEGSDGDFYVQSILEAGLPPQHPLHSGYSLKDNKYIVLVSGLMVGSMKSNPLQFQLLVDYVTGHSGD-EQEQSMAAQIVRVIIAGDSVDMQQS-LLAG----QSLGLKEQRRLAEPIKELDLALTQLAAAMPVDIMPGPNDPANFSLPQQPLHKCLFSGASAYNTFVSATNPHQFDLDGVCFLGTSGQNIDDLGKYS--DAKEKLDY-------MERTLKWRHLAPTAPDTLGCYPFTDRDPFVIEDCPHVYFCGNQKKYASRLLEGSEGQVV-RLVC 414          
BLAST of mRNA_Ecto-sp13_S_contig10751.683.1 vs. uniprot
Match: UPI0007F003C6 (DNA polymerase delta small subunit n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F003C6)

HSP 1 Score: 217 bits (552), Expect = 2.120e-64
Identity = 115/284 (40.49%), Postives = 170/284 (59.86%), Query Frame = 0
Query:    1 GLVIAVKGTVTASGEMLVDDWCPAGIPPPVPSSPSKKVG---------------GRHDPLLVSLLVDFVAGYLGGVEDQEGTSARIGRVIVCGDSVAAPSADLLSGTGPSKRLNAEQQRLVASPMKELDTILALLAAAAPVDVMPGESDPANYTLPQQPLHPCLLRNASRFGALKRVTNPHEAKIGERLFLGSSGQPLLDMARYTTPDAEADKDAKPVCLRRLEEMLKWRHMAPTAPETLGCYPFVTEDPFVVEECPDIFFAGNQPQFATGILEGADGQKVHRV 269
            G+V+A+ G  T +G+ LV+D   AG+PP +   P  K+G                  +PL V LLVD + G+LG  E ++  +A+I +V++ GDSV  P  +LL+G    + L  + Q  ++ P+KE+D +L  +AA+ P+D+MPG +DP+N+ +PQQPLH CL  +++ +   K  TNPH  ++    FLG+SGQ + D  +Y+    E +          LE  LKWRH+APTAP TLGCYPF   DPF VE CP ++FAGNQ +F T ++ G+DGQ V  +
Sbjct:  143 GIVVALHGKETGAGDFLVEDVLEAGLPPQL--DPPNKLGEDKYVVFVSGLNLGSSSSNPLQVQLLVDHITGHLGD-EKEQNNAAQIVQVVIAGDSVEIPR-ELLNG----QNLAPKDQSRLSEPIKEVDILLTQIAASIPLDIMPGPNDPSNFAMPQQPLHRCLFPSSASYNTFKSCTNPHSFELDGVRFLGTSGQNIHDFEKYSEGSEEVEF---------LERTLKWRHIAPTAPNTLGCYPFTDRDPFFVESCPHVYFAGNQNKFGTRLITGSDGQVVRLI 409          
BLAST of mRNA_Ecto-sp13_S_contig10751.683.1 vs. uniprot
Match: UPI001BF810B5 (Uncharacterized protein n=1 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001BF810B5)

HSP 1 Score: 214 bits (544), Expect = 4.140e-64
Identity = 118/284 (41.55%), Postives = 175/284 (61.62%), Query Frame = 0
Query:    1 GLVIAVKGTVTASGEMLVDDWCPAGIPP----PVPSSPSKKV---------GGRHDPLLVSLLVDFVAGYLGGVEDQEGTSARIGRVIVCGDSVAAPSADLLSGTGPSKRLNAEQQRLVASPMKELDTILALLAAAAPVDVMPGESDPANYTLPQQPLHPCLLRNASRFGALKRVTNPHEAKIGERLFLGSSGQPLLDMARYTTPDAEADKDAKPVCLRRLEEMLKWRHMAPTAPETLGCYPFVTEDPFVVEECPDIFFAGNQPQFATGILEGADGQKVHRVLC 271
            G+V+A+ G  T +G+ LV D   AG+PP    P+ SS  K V             +PL   LLVD + G+LG  E ++G +A+I   +V GDS+  P   LL+G    + L ++ Q  ++ P+KELD +L  +AA+ P+D+MPG +DPAN++LPQQPLH CL   +S +   +  TNPH  ++    FLG+SGQ + D+ +Y+    EA KD     +  +E  L+WRH+APTAP TLGCYPF   DPF +E CP ++F GNQ ++ T +++G++GQ V R++C
Sbjct:   63 GIVVALHGKETDAGDFLVQDVLEAGLPPQIELPLKSSEDKYVVFVSGLSVGSSTSNPLRFQLLVDHITGHLGD-EKEQGIAAKIVHFVVAGDSIEIPRG-LLNG----QNLASKDQSRLSEPIKELDILLTQIAASLPLDIMPGPNDPANFSLPQQPLHRCLFPGSSAYNTFRSCTNPHCFELDNIRFLGTSGQNVNDLEKYS----EA-KDK----IEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFFIESCPHVYFVGNQNEYKTDLIKGSEGQFV-RLIC 330          
BLAST of mRNA_Ecto-sp13_S_contig10751.683.1 vs. uniprot
Match: A0A443PIE3_9MAGN (DNA polymerase delta small subunit isoform X1 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443PIE3_9MAGN)

HSP 1 Score: 217 bits (553), Expect = 4.680e-64
Identity = 123/287 (42.86%), Postives = 172/287 (59.93%), Query Frame = 0
Query:    1 GLVIAVKGTVTASGEMLVDDWCPAGIPP----PVPSSPSKKV---------GGRHDPLLVSLLVDFVAGYLGGVEDQEGTSARIGRVIVCGDSVAAPSADLLSGTGPSKRLNAEQQRLVASPMKELDTILALLAAAAPVDVMPGESDPANYTLPQQPLHPCLLRNASRFGALKRVTNPHEAKIGERLFLGSSGQPLLDMARYTTPDAEADKDAKPVCLRRLEEMLKWRHMAPTAPETLGCYPFVTEDPFVVEECPDIFFAGNQPQFATGILEGADGQKVHRVLCEVR 274
            GLV+A+ G  T+ G+  V D   AG+ P    P+ S   K V             +PL + LLVD + G+LG  ++Q   +++I RV++ G+SV  P   LL+G    + L ++ Q  +  P KELD  L  LAAA PVD+MPG  DPANY+LPQQPLH CL   AS +      TNPH  ++    FLG+SGQ + D+ +Y+  DA+   D        LE  L WRH+APTAP TLGCYPF+ +DPF++E CP ++F GNQ ++ T +L+G++GQKV R++C  R
Sbjct:  190 GLVVALHGKETSDGDFFVQDILEAGLAPQKPLPLGSDEDKYVVFVSGLSVGSSESNPLQIQLLVDHMTGHLGDAKEQN-IASQIVRVVIVGNSVNVP-VRLLTG----QNLASKDQSKLFEPFKELDIFLTQLAAALPVDIMPGSDDPANYSLPQQPLHRCLFPGASAYNTFVSCTNPHSFELDTVRFLGTSGQNIDDLDKYS--DAKNKLDF-------LERTLHWRHLAPTAPNTLGCYPFIDKDPFLIESCPHVYFIGNQSKYETRLLQGSEGQKV-RLICVPR 460          
BLAST of mRNA_Ecto-sp13_S_contig10751.683.1 vs. uniprot
Match: A0A4D9CYY3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYY3_9STRA)

HSP 1 Score: 218 bits (556), Expect = 6.820e-64
Identity = 124/303 (40.92%), Postives = 172/303 (56.77%), Query Frame = 0
Query:    1 GLVIAVKGTVTASGEMLVDDWCPAGIPPP--------------------------VPSSPSKKVGGRHDPLLVSLLVDFVAGYLGGVEDQEGTSARIGRVIVCGDSVAAPSADLLSGTGPSKRLNAEQQRLVASPMKELDTILALLAAAAPVDVMPGESDPANYTLPQQPLHPCLLRNASRFGALKRVTNPHEAKIGERLFLGSSGQPLLDMARYTTPDAEADKDAKPVC--LRRLEEMLKWRHMAPTAPETLGCYPFVTEDPFVVEECPDIFFAGNQPQFATGILE-----GADGQKVHRVL 270
            GLV+A KG     G   V+D C AG+P                            V      ++  R D L + LL+D+V G+ G  +++    +RIGRVIV GD +A   A +L      K + ++QQ   A P K +D +LA LA+A PVDVMPG  DP+N+TLPQQP+HPC+L +ASR+ + K V NP+EA +  RLFLG++GQ   D+AR T P +     A      L  +E+ L WRH+APTAP+TL CYPF  +DPFV+   P ++FAGNQP FA  ++E     GA+G++  + L
Sbjct:  195 GLVVAAKGRAVG-GRFFVEDVCAAGMPEQEAGPEGXXXXXXXXXXXGGRGREPQYVMLMSGLRLSDRSDLLPLQLLIDYVQGHAGTADEKRRLVSRIGRVIVAGDLLAPFEASILK----EKHMTSKQQEEFALPFKHVDLVLAQLASAVPVDVMPGADDPSNHTLPQQPIHPCILPHASRYASFKTVPNPYEAWLQRRLFLGNAGQIPADLARSTAPPSLPSSPASSAARTLDLMEKTLHWRHLAPTAPDTLACYPFCDDDPFVLPSLPHVYFAGNQPAFAARLVEEGKEGGAEGKEGKKCL 492          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10751.683.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZB3_ECTSI3.960e-18596.31Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YHI6_9STRA1.640e-7143.03DNA polymerase alpha/epsilon subunit B-domain-cont... [more]
A0A1Y1IIY7_KLENI1.440e-6845.45DNA polymerase delta regulatory subunit 55 n=1 Tax... [more]
A0A7S1XWT2_9STRA3.870e-6742.43Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A2K1KWA5_PHYPA2.840e-6540.64Uncharacterized protein n=3 Tax=Physcomitrium pate... [more]
B8LLG4_PICSI6.080e-6544.06Uncharacterized protein n=1 Tax=Picea sitchensis T... [more]
UPI0007F003C62.120e-6440.49DNA polymerase delta small subunit n=1 Tax=Daucus ... [more]
UPI001BF810B54.140e-6441.55Uncharacterized protein n=1 Tax=Carya illinoinensi... [more]
A0A443PIE3_9MAGN4.680e-6442.86DNA polymerase delta small subunit isoform X1 n=1 ... [more]
A0A4D9CYY3_9STRA6.820e-6440.92Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.60.21.50coord: 35..271
e-value: 4.5E-80
score: 271.2
IPR007185DNA polymerase alpha/delta/epsilon, subunit BPFAMPF04042DNA_pol_E_Bcoord: 43..255
e-value: 6.1E-37
score: 127.0
IPR024826DNA polymerase delta/II small subunit familyPANTHERPTHR10416DNA POLYMERASE DELTA SUBUNIT 2coord: 1..267

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10751contigEcto-sp13_S_contig10751:113..5260 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10751.683.1mRNA_Ecto-sp13_S_contig10751.683.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10751 113..5260 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10751.683.1 ID=prot_Ecto-sp13_S_contig10751.683.1|Name=mRNA_Ecto-sp13_S_contig10751.683.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=275bp
GLVIAVKGTVTASGEMLVDDWCPAGIPPPVPSSPSKKVGGRHDPLLVSLL
VDFVAGYLGGVEDQEGTSARIGRVIVCGDSVAAPSADLLSGTGPSKRLNA
EQQRLVASPMKELDTILALLAAAAPVDVMPGESDPANYTLPQQPLHPCLL
RNASRFGALKRVTNPHEAKIGERLFLGSSGQPLLDMARYTTPDAEADKDA
KPVCLRRLEEMLKWRHMAPTAPETLGCYPFVTEDPFVVEECPDIFFAGNQ
PQFATGILEGADGQKVHRVLCEVR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007185DNA_pol_a/d/e_bsu
IPR024826DNA_pol_delta/II_ssu