prot_Ecto-sp13_S_contig10732.672.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10732.672.1
Unique Nameprot_Ecto-sp13_S_contig10732.672.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length174
Homology
BLAST of mRNA_Ecto-sp13_S_contig10732.672.1 vs. uniprot
Match: A0A6H5KG59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG59_9PHAE)

HSP 1 Score: 237 bits (604), Expect = 1.260e-76
Identity = 131/148 (88.51%), Postives = 138/148 (93.24%), Query Frame = 0
Query:   20 TTQPTDIGNGNMADTTVLQRQQQQPHRETAKPVSKKSTVTGAAAAXXXXXXXXXXXXXXXSAATYEVSPDGDPMTLTAALEVAGAGDTISLGDGIYREPLVTMNAGVEGNPLVIEGGRGAVINYFTGDKSMMWSQKVVDIRHSWVTLR 167
            TTQP  IG+GNMADTT+L+R QQQPHRETAKPVSKKST+TGAA A     XXXXXXXXXXSAATYEVSPDGDPMTLTAALEVAGAGDTISLGDGIYREPLVTMNAGVEGNPLVIEGGR AVINY+TGDKS+MWSQKVVDIRHSW+TLR
Sbjct:    2 TTQPIKIGHGNMADTTILRRNQQQPHRETAKPVSKKSTITGAAGATAARLXXXXXXXXXXSAATYEVSPDGDPMTLTAALEVAGAGDTISLGDGIYREPLVTMNAGVEGNPLVIEGGRDAVINYYTGDKSIMWSQKVVDIRHSWITLR 149          
BLAST of mRNA_Ecto-sp13_S_contig10732.672.1 vs. uniprot
Match: D8LJ42_ECTSI (FirrV-1-B30 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ42_ECTSI)

HSP 1 Score: 234 bits (597), Expect = 2.320e-70
Identity = 137/157 (87.26%), Postives = 147/157 (93.63%), Query Frame = 0
Query:   11 SDELLLAETTTQPTDIGNGNMADTTVLQRQQQQPHRETAKPVSKKSTVTGAAAAXXXXXXXXXXXXXXXSAATYEVSPDGDPMTLTAALEVAGAGDTISLGDGIYREPLVTMNAGVEGNPLVIEGGRGAVINYFTGDKSMMWSQKVVDIRHSWVTLR 167
            S ++LLAETTTQPT+IG+GNMA T  L+RQQQQP++ETAKPVSK STVTGAAAA XXXXXXXXXXXXXX AATYEVSPDGDPMTL AALEVAGAGDTISLGDGIYREPLVTM AGVEGNPLVIEGGR AV+NY+TGDKS+MWSQKVVDIRHSWVTLR
Sbjct:    8 SGKVLLAETTTQPTNIGHGNMAVTANLRRQQQQPYQETAKPVSKNSTVTGAAAATXXXXXXXXXXXXXXXAATYEVSPDGDPMTLAAALEVAGAGDTISLGDGIYREPLVTMKAGVEGNPLVIEGGRDAVVNYYTGDKSIMWSQKVVDIRHSWVTLR 164          
BLAST of mRNA_Ecto-sp13_S_contig10732.672.1 vs. uniprot
Match: D7FHJ7_ECTSI (EsV-1-164 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHJ7_ECTSI)

HSP 1 Score: 208 bits (529), Expect = 3.110e-66
Identity = 123/140 (87.86%), Postives = 129/140 (92.14%), Query Frame = 0
Query:   31 MADTTVLQRQQQQPHRETAKPVSKKSTVTGAAAAXXXXXXXXXXXXXXXSAATYEVSPDGDPMTLTAALEVAGAGDTISLGDGIYREPLVTMNAGVEGNPLVIEGGRGAVINYFTGDKSMMWSQKVVDIRHSWVTLRVRG 170
            MA T  L+RQQQQP++ETAKPVSK STVTGAAAA XXXXXXXXXXXXXX AATYEVSPDGDPMTLTAALEVAGAGDTISLGDGIYREPLVTM AGVEGNPLVIEGGR AV+NY+TGDKS+MWSQKVVDIRHSWVTLR   
Sbjct:    1 MAVTPNLRRQQQQPYQETAKPVSKNSTVTGAAAATXXXXXXXXXXXXXXXAATYEVSPDGDPMTLTAALEVAGAGDTISLGDGIYREPLVTMKAGVEGNPLVIEGGRDAVVNYYTGDKSIMWSQKVVDIRHSWVTLRANA 140          
BLAST of mRNA_Ecto-sp13_S_contig10732.672.1 vs. uniprot
Match: D8LJ28_ECTSI (EsV-1-164 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ28_ECTSI)

HSP 1 Score: 156 bits (394), Expect = 3.840e-46
Identity = 75/87 (86.21%), Postives = 82/87 (94.25%), Query Frame = 0
Query:   80 SAATYEVSPDGDPMTLTAALEVAGAGDTISLGDGIYREPLVTMNAGVEGNPLVIEGGRGAVINYFTGDKSMMWSQKVVDIRHSWVTL 166
            +AA YEVSPDG PMTLTAALEVAGAGD ISL DGIYREP+VTMNAGVEGNPLVI GGRGA+INYF+GD+S+MWSQKVVDIRHS+VTL
Sbjct:   32 NAAMYEVSPDGSPMTLTAALEVAGAGDIISLADGIYREPIVTMNAGVEGNPLVITGGRGAIINYFSGDRSLMWSQKVVDIRHSYVTL 118          
BLAST of mRNA_Ecto-sp13_S_contig10732.672.1 vs. uniprot
Match: A0A6H5K1D2_9PHAE (Beta_helix domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1D2_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 2.710e-41
Identity = 73/87 (83.91%), Postives = 82/87 (94.25%), Query Frame = 0
Query:   80 SAATYEVSPDGDPMTLTAALEVAGAGDTISLGDGIYREPLVTMNAGVEGNPLVIEGGRGAVINYFTGDKSMMWSQKVVDIRHSWVTL 166
            +AA YEVSPDG+PMTLTAALEVAGAGD +SL DG YREP+VTMNAGVEGNPLVI GGRGA+INYF+GD+S+MWSQKVVDIRHS+VTL
Sbjct:   31 NAAMYEVSPDGNPMTLTAALEVAGAGDIVSLADGTYREPIVTMNAGVEGNPLVITGGRGAIINYFSGDRSLMWSQKVVDIRHSYVTL 117          
BLAST of mRNA_Ecto-sp13_S_contig10732.672.1 vs. uniprot
Match: A0A6H5KT05_9PHAE (Beta_helix domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KT05_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 7.770e-17
Identity = 44/86 (51.16%), Postives = 57/86 (66.28%), Query Frame = 0
Query:   81 AATYEVSPDGDPMTLTAALEVAGAGDTISLGDGIYREPLVTMNAGVEGNPLVIEGGRGAVINYFTGDKSMMWSQKVVDIRHSWVTL 166
            A T++ SPDG P ++ +AL  AGAGDT+ L DG Y E +VT+  G  GNPL+I GGR A++N   GD       KVV ++HSWVTL
Sbjct:   13 ARTFDASPDGVPYSIASALAEAGAGDTVVLADGTYNEAIVTVQGGESGNPLIITGGRDALVN--AGDDG-----KVVYVQHSWVTL 91          
BLAST of mRNA_Ecto-sp13_S_contig10732.672.1 vs. uniprot
Match: D7FZD2_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZD2_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 1.100e-9
Identity = 34/85 (40.00%), Postives = 52/85 (61.18%), Query Frame = 0
Query:   83 TYEVSPDGDPMTLTAALEVAGAGDTISLGDGIYREPLVTMNAGVEGNPLVIEGGRGAVINYFTGDKSMMWSQKVVDIRHSWVTLR 167
            TY+V+ DGD   L  A+++A AGDT+SL DG Y + L T+  G  GNP+ + GG GA+I      K+   + + V + HS++ L+
Sbjct:    2 TYDVTVDGDGFGLAEAMDLAEAGDTVSLQDGTYEQALETVRDGESGNPITVVGGPGAII------KAQNSASRSVFVGHSFIELK 80          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10732.672.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5KG59_9PHAE1.260e-7688.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJ42_ECTSI2.320e-7087.26FirrV-1-B30 n=2 Tax=Ectocarpus siliculosus TaxID=2... [more]
D7FHJ7_ECTSI3.110e-6687.86EsV-1-164 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LJ28_ECTSI3.840e-4686.21EsV-1-164 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5K1D2_9PHAE2.710e-4183.91Beta_helix domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5KT05_9PHAE7.770e-1751.16Beta_helix domain-containing protein n=2 Tax=Ectoc... [more]
D7FZD2_ECTSI1.100e-940.00FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 70..168
e-value: 2.9E-10
score: 42.0
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 70..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10732contigEcto-sp13_S_contig10732:1679..5691 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10732.672.1mRNA_Ecto-sp13_S_contig10732.672.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10732 1679..5691 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10732.672.1 ID=prot_Ecto-sp13_S_contig10732.672.1|Name=mRNA_Ecto-sp13_S_contig10732.672.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=174bp
PHSRQQSTSPSDELLLAETTTQPTDIGNGNMADTTVLQRQQQQPHRETAK
PVSKKSTVTGAAAATAARLATAALALTAASAATYEVSPDGDPMTLTAALE
VAGAGDTISLGDGIYREPLVTMNAGVEGNPLVIEGGRGAVINYFTGDKSM
MWSQKVVDIRHSWVTLRVRGKDL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence