prot_Ecto-sp13_S_contig10717.659.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10717.659.1
Unique Nameprot_Ecto-sp13_S_contig10717.659.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length281
Homology
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BLAST of mRNA_Ecto-sp13_S_contig10717.659.1 vs. uniprot
Match: D7FJV3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJV3_ECTSI)

HSP 1 Score: 423 bits (1088), Expect = 3.030e-147
Identity = 235/280 (83.93%), Postives = 244/280 (87.14%), Query Frame = 0 
Query:    1 MSGQTAVVAELLAAGANPHARCSSGETPLDLAGRWLDHNANLPAAPCQSPDSSGVVFEHFPAPIVGGXXXXXXCGSGDPSLVYHGASADHPPWNEQAIAAIYNKNNTPAGPVHSPGWPSPRGVGGGFMQVPSPATPTNFHASSAATAAXXXXXXXXXXXXXXAPPLRSHAKEDAAGVAWLGVAQTTAGGTTVEGQAGGEAIAXXXXXXXANSAFYGQEHSPSPAAKGRLWAERIEAGRNQPLCRVECASYCAMKTPGGSQTAVGIGCCKKYIVDTQFLVI 280
            MSGQT+V+AELLAAGANPHARCSSGETPLDLAGRWLDHNANLPAAP QS  SS +VFE  PAPIVGGXXXXXX   GDPSLVY GA  DHP WNEQAIAAIY+KNNTPAGPVHSPGWPSPRG GGGFMQVPSPATPTN HA       XXXXXXXXXXXXXXAPPLRSH KEDAAGVAWLGVAQTTAGGTTVEGQAGGEA+A       ANSAFYGQE+SPSPA KGRLWAERIEAGRNQPLCRVE ASYCAMKTP G QTAV +GC KKY+VDTQFLV+
Sbjct:   23 MSGQTSVIAELLAAGANPHARCSSGETPLDLAGRWLDHNANLPAAPGQSSGSSEIVFEDSPAPIVGGXXXXXXXXXGDPSLVYQGAPTDHPAWNEQAIAAIYHKNNTPAGPVHSPGWPSPRGAGGGFMQVPSPATPTNVHAXXXXXXXXXXXXXXXXXXXXXAPPLRSHVKEDAAGVAWLGVAQTTAGGTTVEGQAGGEAVAGGAATAVANSAFYGQENSPSPATKGRLWAERIEAGRNQPLCRVEYASYCAMKTPRGPQTAVYVGCRKKYMVDTQFLVV 302
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BLAST of mRNA_Ecto-sp13_S_contig10717.659.1 vs. uniprot
Match: A0A6H5KV60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV60_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 2.260e-5
Identity = 25/29 (86.21%), Postives = 26/29 (89.66%), Query Frame = 0 
Query:  210 ANSAFYGQEHSPSPAAKGRLWAERIEAGR 238
            ANSAF+GQEHS SPA KGRLWAERIEA R
Sbjct:   14 ANSAFFGQEHSSSPATKGRLWAERIEAAR 42
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10717.659.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FJV3_ECTSI3.030e-14783.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KV60_9PHAE2.260e-586.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..42
e-value: 1.4E-5
score: 27.0
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..32
score: 9.649

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10717contigEcto-sp13_S_contig10717:2546..5276 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10717.659.1mRNA_Ecto-sp13_S_contig10717.659.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10717 2546..5282 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10717.659.1 ID=prot_Ecto-sp13_S_contig10717.659.1|Name=mRNA_Ecto-sp13_S_contig10717.659.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=281bp
MSGQTAVVAELLAAGANPHARCSSGETPLDLAGRWLDHNANLPAAPCQSP
DSSGVVFEHFPAPIVGGGGGGGGCGSGDPSLVYHGASADHPPWNEQAIAA
IYNKNNTPAGPVHSPGWPSPRGVGGGFMQVPSPATPTNFHASSAATAAVV
AFTSPPPAPTPPAPPLRSHAKEDAAGVAWLGVAQTTAGGTTVEGQAGGEA
IAGGAAAAAANSAFYGQEHSPSPAAKGRLWAERIEAGRNQPLCRVECASY
CAMKTPGGSQTAVGIGCCKKYIVDTQFLVI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom