prot_Ecto-sp13_S_contig10710.650.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10710.650.1
Unique Nameprot_Ecto-sp13_S_contig10710.650.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length128
Homology
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BLAST of mRNA_Ecto-sp13_S_contig10710.650.1 vs. uniprot
Match: D7G7K3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7K3_ECTSI)

HSP 1 Score: 239 bits (610), Expect = 1.220e-78
Identity = 118/127 (92.91%), Postives = 122/127 (96.06%), Query Frame = 0 
Query:    1 LAIHAIALLIGCYVWGDWTTVLIINLDANLTGVFTSIFVLCAPSKFVYVSCAVLYGVTGLLDMILVAAWFNCEYIDANAGILTLLAMPNIIASFSCFLGCAWSLKVFHICDRDSDQRVPEASDLFLA 127
            LAIHAIALLIGCYVWGDWTTVLIINLDANLTGVFTSIFVL APSKFVYVSCA+LYGVTGLLDMILVAAWFN EYIDANAGILTLLAMPNIIASFSCFLGCAW+LKVFH  DRDSD R+PEASDLFL+
Sbjct:   56 LAIHAIALLIGCYVWGDWTTVLIINLDANLTGVFTSIFVLWAPSKFVYVSCAILYGVTGLLDMILVAAWFNYEYIDANAGILTLLAMPNIIASFSCFLGCAWALKVFHNRDRDSDPRLPEASDLFLS 182
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10710.650.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G7K3_ECTSI1.220e-7892.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 70..80
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 105..127
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 46..69
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 27..45
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..104
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..26
NoneNo IPR availableTMHMMTMhelixcoord: 79..101
NoneNo IPR availableTMHMMTMhelixcoord: 47..69
NoneNo IPR availableTMHMMTMhelixcoord: 4..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10710contigEcto-sp13_S_contig10710:1..1482 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10710.650.1mRNA_Ecto-sp13_S_contig10710.650.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10710 1..2107 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10710.650.1 ID=prot_Ecto-sp13_S_contig10710.650.1|Name=mRNA_Ecto-sp13_S_contig10710.650.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=128bp
LAIHAIALLIGCYVWGDWTTVLIINLDANLTGVFTSIFVLCAPSKFVYVS
CAVLYGVTGLLDMILVAAWFNCEYIDANAGILTLLAMPNIIASFSCFLGC
AWSLKVFHICDRDSDQRVPEASDLFLA*
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