prot_Ecto-sp13_S_contig1069.632.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1069.632.1
Unique Nameprot_Ecto-sp13_S_contig1069.632.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length183
Homology
BLAST of mRNA_Ecto-sp13_S_contig1069.632.1 vs. uniprot
Match: D7FKD0_ECTSI (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKD0_ECTSI)

HSP 1 Score: 298 bits (763), Expect = 4.440e-101
Identity = 143/177 (80.79%), Postives = 145/177 (81.92%), Query Frame = 0
Query:    6 VGDVKFXXXXXXXXXXXXXXXXXXXPFGEWRFLTDCCQHRWVEYADIHNYDSSSVTASWHPWLHHMSDHTPSAGAELPEMKPIEIAVGQHTPHNDFVAPGRVDDVNRSTWRPRGAGMGNIWQEPGEPAMYYKQPGHPQHELSDKGGRFSKQKSMETWDPKDPKGANTKQPIRDLTEV 182
            VGD+KF                   P+G         QHRWVEYADIHNYDSSSVTASWHPWLHHMSDHTPSA AELPEMKPIEIAVGQHTPHNDFVAPGRVDDVNRSTWRPRGAGMGNIWQEPGEP MYYKQPGHPQH LSDKGGRFSKQKSMETWDPKDPKG NTKQPIRDLTEV
Sbjct:   28 VGDIKFGDLKGEDSHGNKYYENKDYPYG---------QHRWVEYADIHNYDSSSVTASWHPWLHHMSDHTPSAAAELPEMKPIEIAVGQHTPHNDFVAPGRVDDVNRSTWRPRGAGMGNIWQEPGEPDMYYKQPGHPQHALSDKGGRFSKQKSMETWDPKDPKGLNTKQPIRDLTEV 195          
BLAST of mRNA_Ecto-sp13_S_contig1069.632.1 vs. uniprot
Match: A0A835ZAE7_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAE7_9STRA)

HSP 1 Score: 132 bits (332), Expect = 1.070e-35
Identity = 68/142 (47.89%), Postives = 91/142 (64.08%), Query Frame = 0
Query:   44 HRWVEYADIHNYDSSSVTASWHPWLHHMSDHTPSAGAELPEMKPIEIAVGQHTPHNDFVAPGRVDDV---NRSTWRPRGAGMGNIWQEPGEPAMYYKQPGHPQHELSDKGGRFSKQKSMETWDPKDPKGANTKQPIRDLTEV 182
            HRWVEYAD HNYDSS+VT  WH WLH+M D  P   A+ P+   +  +     P++  V P     V   N S +RPRG G+GN++Q+ GEP +YYKQPGHP + +SDKGGRF+ +  +E  DP +P   N K+P+R L E+
Sbjct:   53 HRWVEYADCHNYDSSTVTPEWHGWLHNMHDTPPDQSAD-PKRHELTSS-HDDCPYDTHVGPASAAPVLHQNLSGFRPRGYGVGNLFQKWGEPELYYKQPGHPANPISDKGGRFNTEPEVEFADPNNPTMLNPKKPLRSLDEL 192          
BLAST of mRNA_Ecto-sp13_S_contig1069.632.1 vs. uniprot
Match: W7TFP2_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TFP2_9STRA)

HSP 1 Score: 132 bits (332), Expect = 1.310e-35
Identity = 79/186 (42.47%), Postives = 99/186 (53.23%), Query Frame = 0
Query:    6 VGDVKFXXXXXXXXXXXXXXXXXXXPFGEWRFLTDCCQHRWVEYADIHNYDSSSVTASWHPWLHHMSDHTPS--AGAELPEMKPIEIAVGQHTPHNDFVAPGRVD-----DVNRSTWRPRGAGMGNIWQEPGEPAMYYKQPGHP---QHELSDKGGRFSKQKSMETWDPKDPKGANTKQPIRDLTE 181
            +G+VKF                   PFG         QHRWVEY DIHNY+ SS+   WH W+HHM+D  P+  AG   P MK   IA GQHTP+   VA G  D      +N +  R RG G+G++ Q+ GEP  ++ QPGHP   + +   KGGRF   K  E W+P DP+G  T QPIR L E
Sbjct:   27 MGEVKFGDLKGVDVNGNKYFENVEYPFG---------QHRWVEYKDIHNYEPSSIPPEWHGWIHHMTDEVPAGKAGVTEPGMK---IAEGQHTPYQ--VAAGLTDYQMEGQLNWTAHRSRGYGVGSLHQKAGEPDKFWVQPGHPLAAKKQEKGKGGRFEGLKGYEAWNPSDPEGKKTAQPIRSLDE 198          
BLAST of mRNA_Ecto-sp13_S_contig1069.632.1 vs. uniprot
Match: A0A4D9CLK1_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CLK1_9STRA)

HSP 1 Score: 132 bits (332), Expect = 5.900e-35
Identity = 79/186 (42.47%), Postives = 99/186 (53.23%), Query Frame = 0
Query:    6 VGDVKFXXXXXXXXXXXXXXXXXXXPFGEWRFLTDCCQHRWVEYADIHNYDSSSVTASWHPWLHHMSDHTPS--AGAELPEMKPIEIAVGQHTPHNDFVAPGRVD-----DVNRSTWRPRGAGMGNIWQEPGEPAMYYKQPGHP---QHELSDKGGRFSKQKSMETWDPKDPKGANTKQPIRDLTE 181
            +G+VKF                   PFG         QHRWVEY DIHNY+ SS+   WH W+HHM+D  P+  AG   P MK   IA GQHTP+   VA G  D      +N +  R RG G+G++ Q+ GEP  ++ QPGHP   + +   KGGRF   K  E W+P DP+G  T QPIR L E
Sbjct:   84 MGEVKFGDLKGVDVNGNKYFENVEYPFG---------QHRWVEYKDIHNYEPSSIPPEWHGWIHHMTDEVPAGKAGVTEPGMK---IAEGQHTPYQ--VATGLTDYQMEGQLNWTAHRSRGYGVGSLHQKAGEPDKFWVQPGHPLAAKKQEKGKGGRFEGLKGYEAWNPSDPEGKKTAQPIRSLDE 255          
BLAST of mRNA_Ecto-sp13_S_contig1069.632.1 vs. uniprot
Match: A0A7S0XDH0_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XDH0_9STRA)

HSP 1 Score: 105 bits (263), Expect = 1.850e-25
Identity = 59/157 (37.58%), Postives = 82/157 (52.23%), Query Frame = 0
Query:    6 VGDVKFXXXXXXXXXXXXXXXXXXXPFGEWRFLTDCCQHRWVEYADIHNYDSSSVTASWHPWLHHMSDHTPSAGA---ELPEMKPIEIAVGQHTPHNDFVAPGRVDDVNRSTWRPRGAGMGNIWQEPGEPAMYYKQPGHPQHELSDKGGRFSKQKSM 159
            +GD+KF                   PF          QHRW+EYADIH++D+S +   WH W+HHM D  P  G     +P + P+  AV ++      V P  ++ VN +T+R RG  +G++   P EP  YYKQPGHP H L +KGGR+   KS+
Sbjct:   27 IGDIKFGVLKGTDRFGNKYYEDLSAPFN---------QHRWIEYADIHDFDASMIQPEWHGWMHHMYDEVPGEGTIKTGIP-LTPVSHAVYKNHVGYSNVEP--LEQVNLTTYRSRGYKVGSLKTGPDEPDRYYKQPGHPLHPLVEKGGRYKHIKSI 171          
BLAST of mRNA_Ecto-sp13_S_contig1069.632.1 vs. uniprot
Match: A0A7S2GA95_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GA95_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 6.820e-22
Identity = 58/134 (43.28%), Postives = 73/134 (54.48%), Query Frame = 0
Query:   43 QHRWVEYADIHNYDSSSVTASWHPWLHHMSDHTPSAGAELPEMK---PIEIAVGQHTPHNDFVAPGRVDD---VNRSTWRPRGAGMGNIWQEPGEPAMYYKQPGHPQHELSDKGGRFSKQKSMETWDPKDPKGA 170
            QHRWVEYADIHNYD++SV   WH W+ HM D   S   E    K    +EI  G H+ ++  V     +    +N +  R RG  +G I Q+P E   Y+K  G  Q++ S   GRF  QK ME WDP DP GA
Sbjct:   93 QHRWVEYADIHNYDAASVPPEWHGWMTHMQDAPGSDAREFITEKLKTKLEIDKGDHSIYDHHVGHTTYEMDTLLNHTMHRKRGFNIGGIKQKPEEEDKYHKHAGSAQNKGST--GRFESQKGMEYWDPADPDGA 224          
BLAST of mRNA_Ecto-sp13_S_contig1069.632.1 vs. uniprot
Match: A0A7S3HS43_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HS43_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 2.380e-20
Identity = 54/154 (35.06%), Postives = 74/154 (48.05%), Query Frame = 0
Query:    6 VGDVKFXXXXXXXXXXXXXXXXXXXPFGEWRFLTDCCQHRWVEYADIHNYDSSSVTASWHPWLHHMSDHTPSAGAELPEMKPIEIAVGQHTPHNDFVAPGRVD---------DVNRSTWRPRGAGMGNIWQEPGEPAMYYKQPGHPQHELSDKG 150
            +GD+KF                   PFG         QHRWVEY +IHNYDS+ +   WH W+HH+ D TP+    +P+  P       H  +N  V  GRVD          ++ + +R RG  +G++   P E   YYKQPGHP  + S+KG
Sbjct:   29 IGDLKFGELKGTDKFGNKYFENQDLPFG---------QHRWVEYKNIHNYDSTMIQPEWHGWMHHVYDETPNDPVAVPDYLPTSTI--SHAIYNTHV--GRVDPAAAANDREQIDTTQYRRRGYKIGSLMTGPDEEDHYYKQPGHPLSKDSEKG 169          
BLAST of mRNA_Ecto-sp13_S_contig1069.632.1 vs. uniprot
Match: A0A1Z5JSL8_FISSO (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JSL8_FISSO)

HSP 1 Score: 76.6 bits (187), Expect = 1.080e-13
Identity = 49/119 (41.18%), Postives = 60/119 (50.42%), Query Frame = 0
Query:   43 QHRWVEYADIHNYDSSSVTASWHPWLHHMSDHTPSAGAELPEMK------------PIEIAVGQHTPHNDFVAPGRVDDVNRSTWRPRGAGMGN--IWQEPGEPAMYYKQPGHPQHELS 147
            QHRWVE ADIHN+DS+ V   WH WL  M+D TPS   E  E K            P +  VG   P+ +F         N+S  R RG G+GN  +   PG P  YY QPG P ++ S
Sbjct:   60 QHRWVEPADIHNFDSAQVPPEWHGWLTCMNDATPSMENEYIEEKMSHLKSSEISHAPFKSNVGHQEPYFNF-----HHMHNQSLIRSRGYGIGNHVVGLPPGAPDAYYTQPGSPYNDAS 173          
BLAST of mRNA_Ecto-sp13_S_contig1069.632.1 vs. uniprot
Match: B7FVX2_PHATC (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FVX2_PHATC)

HSP 1 Score: 70.1 bits (170), Expect = 1.900e-11
Identity = 44/119 (36.97%), Postives = 61/119 (51.26%), Query Frame = 0
Query:   43 QHRWVEYADIHNYDSSSVTASWHPWLHHMSDHTPSAGAE-LPEMK-----------PIEIAVGQHTPHNDFVAPGRVDDVNRSTWRPRGAGMGN--IWQEPGEPAMYYKQPGHPQHELS 147
            QHRWVE A+IH++DS+ +   WH W+  M+D TPS   E + +M            P +  +G   P+ +F         N+S  R RG G+GN  +   PG P  YY QPG P +E S
Sbjct:   35 QHRWVEPANIHDFDSTHIPPEWHGWMVSMNDATPSLEQEYIDKMSKHTIKGEISHAPYQSNIGHQEPYFNFNGMH-----NQSQIRSRGYGIGNHVVGLPPGAPDAYYTQPGSPYNEAS 148          
BLAST of mRNA_Ecto-sp13_S_contig1069.632.1 vs. uniprot
Match: C1EHV1_MICCC (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EHV1_MICCC)

HSP 1 Score: 54.3 bits (129), Expect = 1.920e-6
Identity = 26/78 (33.33%), Postives = 40/78 (51.28%), Query Frame = 0
Query:   43 QHRWVEYADIHNYDSSSVTASWHPWLHHMSDHTPSAGAELPEMKPIEIAVGQHTPHNDFVAPGRVDDVNRSTWRPRGA 120
            +HRWVEYAD+ NY++S+V + WH WL H+ D    A    P+ +              F+A G    V    ++P+G+
Sbjct:   23 RHRWVEYADLDNYNASTVPSEWHGWLSHVDDEPGLATRTAPKYQA------------KFIAGGLTTGVQGEMYQPKGS 88          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1069.632.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D7FKD0_ECTSI4.440e-10180.79NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A835ZAE7_9STRA1.070e-3547.89NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
W7TFP2_9STRA1.310e-3542.47NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A4D9CLK1_9STRA5.900e-3542.47NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A7S0XDH0_9STRA1.850e-2537.58NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A7S2GA95_9STRA6.820e-2243.28NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A7S3HS43_9STRA2.380e-2035.06NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A1Z5JSL8_FISSO1.080e-1341.18NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
B7FVX2_PHATC1.900e-1136.97NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
C1EHV1_MICCC1.920e-633.33NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007763NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12PFAMPF05071NDUFA12coord: 12..80
e-value: 2.5E-16
score: 60.3
IPR007763NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12PANTHERPTHR12910NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT B17.2coord: 8..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1069contigEcto-sp13_S_contig1069:978..3540 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1069.632.1mRNA_Ecto-sp13_S_contig1069.632.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1069 978..3540 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1069.632.1 ID=prot_Ecto-sp13_S_contig1069.632.1|Name=mRNA_Ecto-sp13_S_contig1069.632.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=183bp
MAPRKVGDVKFGDFKGEDAHGNKYYENKEYPFGEWRFLTDCCQHRWVEYA
DIHNYDSSSVTASWHPWLHHMSDHTPSAGAELPEMKPIEIAVGQHTPHND
FVAPGRVDDVNRSTWRPRGAGMGNIWQEPGEPAMYYKQPGHPQHELSDKG
GRFSKQKSMETWDPKDPKGANTKQPIRDLTEV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007763NDUFA12