prot_Ecto-sp13_S_contig1068.624.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig1068.624.1
Unique Name	prot_Ecto-sp13_S_contig1068.624.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	129

Homology

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BLAST of mRNA_Ecto-sp13_S_contig1068.624.1 vs. uniprot
Match: D7G6S7_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6S7_ECTSI)

HSP 1 Score: 277 bits (708), Expect = 1.200e-94
Identity = 127/128 (99.22%), Postives = 128/128 (100.00%), Query Frame = 0

Query:    1 MAAETKGQEPQDVVMGESGKGPEPGMGQVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLAS 128
            MAAETKGQEPQDVVMGESGKGPEPG+GQVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLAS
Sbjct:    1 MAAETKGQEPQDVVMGESGKGPEPGIGQVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLAS 128

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BLAST of mRNA_Ecto-sp13_S_contig1068.624.1 vs. uniprot
Match: A0A7S2Y0P1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0P1_9STRA)

HSP 1 Score: 221 bits (564), Expect = 8.540e-73
Identity = 104/126 (82.54%), Postives = 110/126 (87.30%), Query Frame = 0

Query:    1 MAAETKGQEPQDVVMGESGKGPEPGMGQVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 126
            MAAETKG+   DV M ++ +          PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLS+AFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIE+IPGYGSL
Sbjct:    1 MAAETKGET--DVEMLDAKESSN------VPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSVAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIEKIPGYGSL 118

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BLAST of mRNA_Ecto-sp13_S_contig1068.624.1 vs. uniprot
Match: A0A7S3K273_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K273_9STRA)

HSP 1 Score: 219 bits (557), Expect = 3.610e-71
Identity = 94/98 (95.92%), Postives = 96/98 (97.96%), Query Frame = 0

Query:   31 PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLAS 128
            P+FEIKKWNA+ MWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL S
Sbjct:   62 PKFEIKKWNAICMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLGS 159

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BLAST of mRNA_Ecto-sp13_S_contig1068.624.1 vs. uniprot
Match: A0A1E7FMU3_9STRA (Ring-box protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FMU3_9STRA)

HSP 1 Score: 216 bits (551), Expect = 1.030e-70
Identity = 95/103 (92.23%), Postives = 98/103 (95.15%), Query Frame = 0

Query:   26 MGQVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLAS 128
            +G  APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSP N+NGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEW+FAKIERIPGYG LAS
Sbjct:   25 VGSAAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLKTRSVCPLCNKEWDFAKIERIPGYGQLAS 127

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BLAST of mRNA_Ecto-sp13_S_contig1068.624.1 vs. uniprot
Match: A0A4D9CQ35_9STRA (RING-type domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CQ35_9STRA)

HSP 1 Score: 212 bits (539), Expect = 1.070e-68
Identity = 91/100 (91.00%), Postives = 94/100 (94.00%), Query Frame = 0

Query:   27 GQVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 126
            G  APRFEIKKWNAV MWSWDICADTCAICRN+LNEPSIEYQANPSPNNENGLSIAFGCC HVFHLDCIQRWLK RSVCPLCNKEWEF+KIERIPGY +L
Sbjct:   39 GAAAPRFEIKKWNAVTMWSWDICADTCAICRNNLNEPSIEYQANPSPNNENGLSIAFGCCSHVFHLDCIQRWLKARSVCPLCNKEWEFSKIERIPGYNAL 138

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BLAST of mRNA_Ecto-sp13_S_contig1068.624.1 vs. uniprot
Match: A0A1Z5J6S6_FISSO (RING-box protein 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J6S6_FISSO)

HSP 1 Score: 211 bits (537), Expect = 1.150e-68
Identity = 92/97 (94.85%), Postives = 94/97 (96.91%), Query Frame = 0

Query:   30 APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 126
            APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSP N+NGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEW+FAKIERIPGYG L
Sbjct:   23 APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLKTRSVCPLCNKEWDFAKIERIPGYGQL 119

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BLAST of mRNA_Ecto-sp13_S_contig1068.624.1 vs. uniprot
Match: A0A7S3PD50_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PD50_9STRA)

HSP 1 Score: 211 bits (537), Expect = 1.550e-68
Identity = 92/97 (94.85%), Postives = 94/97 (96.91%), Query Frame = 0

Query:   30 APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 126
            APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSP N+NGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEW+FAKIERIPGYG L
Sbjct:   32 APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLKTRSVCPLCNKEWDFAKIERIPGYGQL 128

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BLAST of mRNA_Ecto-sp13_S_contig1068.624.1 vs. uniprot
Match: B7G7T1_PHATC (Predicted protein n=4 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G7T1_PHATC)

HSP 1 Score: 211 bits (537), Expect = 1.770e-68
Identity = 92/97 (94.85%), Postives = 94/97 (96.91%), Query Frame = 0

Query:   30 APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 126
            APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSP N+NGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEW+FAKIERIPGYG L
Sbjct:   36 APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLKTRSVCPLCNKEWDFAKIERIPGYGQL 132

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BLAST of mRNA_Ecto-sp13_S_contig1068.624.1 vs. uniprot
Match: A0A7S1BRM9_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BRM9_9STRA)

HSP 1 Score: 211 bits (538), Expect = 1.780e-68
Identity = 92/97 (94.85%), Postives = 95/97 (97.94%), Query Frame = 0

Query:   30 APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 126
            A RFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEWE+AKIE+IPG+GSL
Sbjct:   47 AKRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGACGHVFHLDCIQRWLKTRSVCPLCNKEWEYAKIEKIPGFGSL 143

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BLAST of mRNA_Ecto-sp13_S_contig1068.624.1 vs. uniprot
Match: A0A7S1UML7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UML7_9STRA)

HSP 1 Score: 211 bits (537), Expect = 5.760e-68
Identity = 92/97 (94.85%), Postives = 94/97 (96.91%), Query Frame = 0

Query:   30 APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 126
            APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSP N+NGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEW+FAKIERIPGYG L
Sbjct:   72 APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLKTRSVCPLCNKEWDFAKIERIPGYGQL 168

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1068.624.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1068.624.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G6S7_ECTSI	1.200e-94	99.22	RING-type domain-containing protein n=2 Tax=Ectoca...	[more]
A0A7S2Y0P1_9STRA	8.540e-73	82.54	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A7S3K273_9STRA	3.610e-71	95.92	Hypothetical protein n=1 Tax=Aureoumbra lagunensis...	[more]
A0A1E7FMU3_9STRA	1.030e-70	92.23	Ring-box protein n=1 Tax=Fragilariopsis cylindrus ...	[more]
A0A4D9CQ35_9STRA	1.070e-68	91.00	RING-type domain-containing protein n=3 Tax=Monodo...	[more]
A0A1Z5J6S6_FISSO	1.150e-68	94.85	RING-box protein 1 n=2 Tax=Fistulifera solaris Tax...	[more]
A0A7S3PD50_9STRA	1.550e-68	94.85	Hypothetical protein n=1 Tax=Amphora coffeiformis ...	[more]
B7G7T1_PHATC	1.770e-68	94.85	Predicted protein n=4 Tax=Phaeodactylum tricornutu...	[more]
A0A7S1BRM9_9STRA	1.780e-68	94.85	Hypothetical protein n=1 Tax=Corethron hystrix Tax...	[more]
A0A7S1UML7_9STRA	5.760e-68	94.85	Hypothetical protein n=1 Tax=Grammatophora oceanic...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 53..108 e-value: 1.4E-5 score: 34.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 53..109 score: 11.929
IPR024766	Zinc finger, RING-H2-type	PFAM	PF12678	zf-rbx1	coord: 51..109 e-value: 7.9E-21 score: 74.1
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 25..119 e-value: 8.3E-30 score: 104.8
None	No IPR available	PANTHER	PTHR11210:SF2	E3 UBIQUITIN-PROTEIN LIGASE RBX1	coord: 28..118
None	No IPR available	PANTHER	PTHR11210	RING BOX	coord: 28..118
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 31..116

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1068	contig	Ecto-sp13_S_contig1068:7201..8773 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1068.624.1	mRNA_Ecto-sp13_S_contig1068.624.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig1068 5369..9722 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig1068.624.1 ID=prot_Ecto-sp13_S_contig1068.624.1|Name=mRNA_Ecto-sp13_S_contig1068.624.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=129bp
MAAETKGQEPQDVVMGESGKGPEPGMGQVAPRFEIKKWNAVAMWSWDICA
DTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLK
TRSVCPLCNKEWEFAKIERIPGYGSLAS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR024766	Znf_RING_H2
IPR013083	Znf_RING/FYVE/PHD