mRNA_Ecto-sp13_S_contig1068.624.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1068.624.1 vs. uniprot
Match: D7G6S7_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6S7_ECTSI) HSP 1 Score: 277 bits (708), Expect = 4.360e-84 Identity = 127/128 (99.22%), Postives = 128/128 (100.00%), Query Frame = 3
Query: 1833 MAAETKGQEPQDVVMGESGKGPEPGMGQVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLAS 2216
MAAETKGQEPQDVVMGESGKGPEPG+GQVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLAS
Sbjct: 1 MAAETKGQEPQDVVMGESGKGPEPGIGQVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLAS 128
BLAST of mRNA_Ecto-sp13_S_contig1068.624.1 vs. uniprot
Match: A0A7S2Y0P1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0P1_9STRA) HSP 1 Score: 221 bits (564), Expect = 5.790e-64 Identity = 104/126 (82.54%), Postives = 110/126 (87.30%), Query Frame = 3
Query: 1833 MAAETKGQEPQDVVMGESGKGPEPGMGQVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 2210
MAAETKG+ DV M ++ + PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLS+AFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIE+IPGYGSL
Sbjct: 1 MAAETKGET--DVEMLDAKESSN------VPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSVAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIEKIPGYGSL 118
BLAST of mRNA_Ecto-sp13_S_contig1068.624.1 vs. uniprot
Match: A0A7S3K273_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K273_9STRA) HSP 1 Score: 219 bits (557), Expect = 1.950e-62 Identity = 94/98 (95.92%), Postives = 96/98 (97.96%), Query Frame = 3
Query: 1923 PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLAS 2216
P+FEIKKWNA+ MWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL S
Sbjct: 62 PKFEIKKWNAICMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLGS 159
BLAST of mRNA_Ecto-sp13_S_contig1068.624.1 vs. uniprot
Match: A0A1E7FMU3_9STRA (Ring-box protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FMU3_9STRA) HSP 1 Score: 216 bits (551), Expect = 4.540e-62 Identity = 95/103 (92.23%), Postives = 98/103 (95.15%), Query Frame = 3
Query: 1908 MGQVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLAS 2216
+G APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSP N+NGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEW+FAKIERIPGYG LAS
Sbjct: 25 VGSAAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLKTRSVCPLCNKEWDFAKIERIPGYGQLAS 127
BLAST of mRNA_Ecto-sp13_S_contig1068.624.1 vs. uniprot
Match: A0A4D9CQ35_9STRA (RING-type domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CQ35_9STRA) HSP 1 Score: 212 bits (539), Expect = 3.120e-60 Identity = 91/100 (91.00%), Postives = 94/100 (94.00%), Query Frame = 3
Query: 1911 GQVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 2210
G APRFEIKKWNAV MWSWDICADTCAICRN+LNEPSIEYQANPSPNNENGLSIAFGCC HVFHLDCIQRWLK RSVCPLCNKEWEF+KIERIPGY +L
Sbjct: 39 GAAAPRFEIKKWNAVTMWSWDICADTCAICRNNLNEPSIEYQANPSPNNENGLSIAFGCCSHVFHLDCIQRWLKARSVCPLCNKEWEFSKIERIPGYNAL 138
BLAST of mRNA_Ecto-sp13_S_contig1068.624.1 vs. uniprot
Match: A0A1Z5J6S6_FISSO (RING-box protein 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J6S6_FISSO) HSP 1 Score: 211 bits (537), Expect = 3.150e-60 Identity = 92/97 (94.85%), Postives = 94/97 (96.91%), Query Frame = 3
Query: 1920 APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 2210
APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSP N+NGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEW+FAKIERIPGYG L
Sbjct: 23 APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLKTRSVCPLCNKEWDFAKIERIPGYGQL 119
BLAST of mRNA_Ecto-sp13_S_contig1068.624.1 vs. uniprot
Match: A0A7S3PD50_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PD50_9STRA) HSP 1 Score: 211 bits (537), Expect = 4.230e-60 Identity = 92/97 (94.85%), Postives = 94/97 (96.91%), Query Frame = 3
Query: 1920 APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 2210
APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSP N+NGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEW+FAKIERIPGYG L
Sbjct: 32 APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLKTRSVCPLCNKEWDFAKIERIPGYGQL 128
BLAST of mRNA_Ecto-sp13_S_contig1068.624.1 vs. uniprot
Match: B7G7T1_PHATC (Predicted protein n=4 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G7T1_PHATC) HSP 1 Score: 211 bits (537), Expect = 4.830e-60 Identity = 92/97 (94.85%), Postives = 94/97 (96.91%), Query Frame = 3
Query: 1920 APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 2210
APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSP N+NGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEW+FAKIERIPGYG L
Sbjct: 36 APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLKTRSVCPLCNKEWDFAKIERIPGYGQL 132
BLAST of mRNA_Ecto-sp13_S_contig1068.624.1 vs. uniprot
Match: A0A7S1BRM9_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BRM9_9STRA) HSP 1 Score: 211 bits (538), Expect = 5.060e-60 Identity = 92/97 (94.85%), Postives = 95/97 (97.94%), Query Frame = 3
Query: 1920 APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 2210
A RFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEWE+AKIE+IPG+GSL
Sbjct: 47 AKRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGACGHVFHLDCIQRWLKTRSVCPLCNKEWEYAKIEKIPGFGSL 143
BLAST of mRNA_Ecto-sp13_S_contig1068.624.1 vs. uniprot
Match: A0A7S1UML7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UML7_9STRA) HSP 1 Score: 212 bits (539), Expect = 8.400e-60 Identity = 101/136 (74.26%), Postives = 111/136 (81.62%), Query Frame = 3
Query: 1818 LPRAEMAAETKGQEPQDVVMGESGKGPEP-----GMGQVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 2210
LP+ + ++ +E +DV M ++ P G G APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSP N+NGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEW+FAKIERIPGYG L
Sbjct: 34 LPQIRVFSKMSTEETKDVAMKDAAAPPAKKPAAKGSGP-APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLKTRSVCPLCNKEWDFAKIERIPGYGQL 168 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1068.624.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1068.624.1 >prot_Ecto-sp13_S_contig1068.624.1 ID=prot_Ecto-sp13_S_contig1068.624.1|Name=mRNA_Ecto-sp13_S_contig1068.624.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=129bp MAAETKGQEPQDVVMGESGKGPEPGMGQVAPRFEIKKWNAVAMWSWDICAback to top mRNA from alignment at Ecto-sp13_S_contig1068:5369..9722+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1068.624.1 ID=mRNA_Ecto-sp13_S_contig1068.624.1|Name=mRNA_Ecto-sp13_S_contig1068.624.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4354bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1068:5369..9722+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1068:5369..9722+ >mRNA_Ecto-sp13_S_contig1068.624.1 ID=mRNA_Ecto-sp13_S_contig1068.624.1|Name=mRNA_Ecto-sp13_S_contig1068.624.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=387bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1068:5369..9722+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |