prot_Ecto-sp13_S_contig10668.616.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10668.616.1
Unique Nameprot_Ecto-sp13_S_contig10668.616.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length87
Homology
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BLAST of mRNA_Ecto-sp13_S_contig10668.616.1 vs. uniprot
Match: D7FM59_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM59_ECTSI)

HSP 1 Score: 148 bits (374), Expect = 1.160e-39
Identity = 73/84 (86.90%), Postives = 79/84 (94.05%), Query Frame = 0 
Query:    1 QSGVVGDGRGTAVGRGKAISNVAVSKGRGKGKPGVGTARQKEADHPLAKWLNEWTERKGRGWEGDVPPVEGLSMREEVDKLLAQ 84
            +SGVVGDGRG AVGRGKAISNVAVSKGR KGK G GTARQ+EADHPLAKWLNEWTERK RGWEGDVPPV+GL++REEV+KLLAQ
Sbjct:  516 KSGVVGDGRGPAVGRGKAISNVAVSKGRXKGKAGGGTARQREADHPLAKWLNEWTERKERGWEGDVPPVQGLTVREEVNKLLAQ 599
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10668.616.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FM59_ECTSI1.160e-3986.90Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10668contigEcto-sp13_S_contig10668:5025..5658 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10668.616.1mRNA_Ecto-sp13_S_contig10668.616.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10668 5025..5658 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10668.616.1 ID=prot_Ecto-sp13_S_contig10668.616.1|Name=mRNA_Ecto-sp13_S_contig10668.616.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=87bp
QSGVVGDGRGTAVGRGKAISNVAVSKGRGKGKPGVGTARQKEADHPLAKW
LNEWTERKGRGWEGDVPPVEGLSMREEVDKLLAQAS*
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