prot_Ecto-sp13_S_contig10648.597.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10648.597.1
Unique Nameprot_Ecto-sp13_S_contig10648.597.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length131
Homology
BLAST of mRNA_Ecto-sp13_S_contig10648.597.1 vs. uniprot
Match: D7FME9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME9_ECTSI)

HSP 1 Score: 239 bits (609), Expect = 3.810e-77
Identity = 118/130 (90.77%), Postives = 123/130 (94.62%), Query Frame = 0
Query:    1 MVTCTLLGPLPLAILLCWFFHHFCVVVPRQAERERAVERLRRFPGQRRWHAGGWLIMMRARHQRSLARPKGWPIRLRKLERFNEANIVNKIPPEIELLETGRSRMNFVRAVMAVVEINEEGLFRHVISFL 130
            MV CTLLGPLPLAILLCW+FHHF VVVPRQA RERAVERLR FPGQRRWHAGGWLIM+RARHQR LARPKGWPIRLRKLERFNEANIV+KIPPE+ELLE GRSRMNFVRAV AVVEINEEGLFRH+ISFL
Sbjct:  165 MVICTLLGPLPLAILLCWYFHHFYVVVPRQAARERAVERLRTFPGQRRWHAGGWLIMIRARHQRFLARPKGWPIRLRKLERFNEANIVHKIPPELELLEAGRSRMNFVRAVTAVVEINEEGLFRHIISFL 294          
BLAST of mRNA_Ecto-sp13_S_contig10648.597.1 vs. uniprot
Match: D7FMF1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMF1_ECTSI)

HSP 1 Score: 125 bits (313), Expect = 3.980e-35
Identity = 60/74 (81.08%), Postives = 66/74 (89.19%), Query Frame = 0
Query:   57 MMRARHQRSLARPKGWPIRLRKLERFNEANIVNKIPPEIELLETGRSRMNFVRAVMAVVEINEEGLFRHVISFL 130
            M+RARHQRSL R  GWP+RLRKLER+N+ANI NKIPPE+ELLE GRSRMNF RA MAVVE NEEGLFRH+ISFL
Sbjct:    1 MLRARHQRSLGRSTGWPVRLRKLERYNKANIFNKIPPELELLEAGRSRMNFARAAMAVVETNEEGLFRHIISFL 74          
BLAST of mRNA_Ecto-sp13_S_contig10648.597.1 vs. uniprot
Match: D8LNC9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNC9_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 2.740e-25
Identity = 53/83 (63.86%), Postives = 63/83 (75.90%), Query Frame = 0
Query:   57 MMRARHQRSLARPKGWPIRLRKLERFNEANIV---------NKIPPEIELLETGRSRMNFVRAVMAVVEINEEGLFRHVISFL 130
            MMRAR QRSLAR KGW  RLRKL+ ++EANI+         ++ PPEIELLE GR +MNFVRAV A +EI EEGLFRH+IS+L
Sbjct:    1 MMRARRQRSLARSKGWQARLRKLDHYDEANIMKYAMRDFMGSQTPPEIELLEAGRLKMNFVRAVTAAIEIPEEGLFRHIISYL 83          
BLAST of mRNA_Ecto-sp13_S_contig10648.597.1 vs. uniprot
Match: D8LNB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNB4_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 1.140e-24
Identity = 54/84 (64.29%), Postives = 65/84 (77.38%), Query Frame = 0
Query:   57 MMRARHQRSL-ARPKGWPIRLRKLERFNEANIVN---------KIPPEIELLETGRSRMNFVRAVMAVVEINEEGLFRHVISFL 130
            MMRARH+RS  AR KGW  RLRKLER++EA+I+          + PPEIELLE GR +MNFVRAV+AVVEI EEGLFRH++S+L
Sbjct:    1 MMRARHERSSSARSKGWRARLRKLERYDEASIIKYAMRDFMGGQTPPEIELLEAGRLKMNFVRAVIAVVEIQEEGLFRHIMSYL 84          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10648.597.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FME9_ECTSI3.810e-7790.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FMF1_ECTSI3.980e-3581.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNC9_ECTSI2.740e-2563.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNB4_ECTSI1.140e-2464.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..27
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 28..130
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..31
score: 0.616
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10648contigEcto-sp13_S_contig10648:457..1235 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10648.597.1mRNA_Ecto-sp13_S_contig10648.597.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10648 442..1582 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10648.597.1 ID=prot_Ecto-sp13_S_contig10648.597.1|Name=mRNA_Ecto-sp13_S_contig10648.597.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=131bp
MVTCTLLGPLPLAILLCWFFHHFCVVVPRQAERERAVERLRRFPGQRRWH
AGGWLIMMRARHQRSLARPKGWPIRLRKLERFNEANIVNKIPPEIELLET
GRSRMNFVRAVMAVVEINEEGLFRHVISFL*
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