prot_Ecto-sp13_S_contig10638.590.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10638.590.1
Unique Nameprot_Ecto-sp13_S_contig10638.590.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length68
Homology
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BLAST of mRNA_Ecto-sp13_S_contig10638.590.1 vs. uniprot
Match: D8LIH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIH1_ECTSI)

HSP 1 Score: 129 bits (324), Expect = 5.620e-38
Identity = 66/67 (98.51%), Postives = 66/67 (98.51%), Query Frame = 0 
Query:    1 MRTLQRALTSHQTDLFKLCQENQYTLSFLGAIDGAKPVHGGETGADSAAAASETTTTGPLAKRMRVP 67
            MRTLQRALTSHQTDLFKLCQENQYTLSFLGAIDGAKPVHGGETGADSAAAASETTTTGP AKRMRVP
Sbjct:    1 MRTLQRALTSHQTDLFKLCQENQYTLSFLGAIDGAKPVHGGETGADSAAAASETTTTGPSAKRMRVP 67
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BLAST of mRNA_Ecto-sp13_S_contig10638.590.1 vs. uniprot
Match: A0A6H5LCN5_9PHAE (Utp12 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCN5_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 6.430e-32
Identity = 64/67 (95.52%), Postives = 64/67 (95.52%), Query Frame = 0 
Query:    1 MRTLQRALTSHQTDLFKLCQENQYTLSFLGAIDGAKPVHGGETGADSAAAASETTTTGPLAKRMRVP 67
            MRTLQRALTSHQTDLFKLCQENQYTLSFLG IDGAKPVHGGETGADSAAAAS T TTGPLAKRMRVP
Sbjct:  874 MRTLQRALTSHQTDLFKLCQENQYTLSFLGGIDGAKPVHGGETGADSAAAASGTVTTGPLAKRMRVP 940
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10638.590.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LIH1_ECTSI5.620e-3898.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LCN5_9PHAE6.430e-3295.52Utp12 domain-containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10638contigEcto-sp13_S_contig10638:2697..3474 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10638.590.1mRNA_Ecto-sp13_S_contig10638.590.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10638 2697..3474 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10638.590.1 ID=prot_Ecto-sp13_S_contig10638.590.1|Name=mRNA_Ecto-sp13_S_contig10638.590.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=68bp
MRTLQRALTSHQTDLFKLCQENQYTLSFLGAIDGAKPVHGGETGADSAAA
ASETTTTGPLAKRMRVP*
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