prot_Ecto-sp13_S_contig10633.588.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10633.588.1
Unique Nameprot_Ecto-sp13_S_contig10633.588.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length159
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10633.588.1 vs. uniprot
Match: D8LLS8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLS8_ECTSI)

HSP 1 Score: 276 bits (707), Expect = 1.680e-93
Identity = 147/159 (92.45%), Postives = 151/159 (94.97%), Query Frame = 0 
Query:    1 MVYPRRAAPQSRAGTVLALPLLAAALVLLCASLLPAGAEAMGPNDDGAGNNLGLLAQACASSFCGLGVDALDLWLSLEEVCRTGASNQPSLEGGGEIELGGVYGRGWGTAAAEGG-RGGDWSASSTALVCGGVLAVSALMGFRSGIKVGTWTKEGYPVA 158
            M  PR AAPQSRA TVLALPLLAAALVL+CASLLPAGAEAMGPNDDGA NNLGLLAQACASSFCGLGVDALDLWLSLEEVCRTGASNQPSLEGGGE+E GGV+G GWGTAAAEGG RGGDWSASSTALVCGGVLAVSAL+GFRSGIKVGTWTKEGYPVA
Sbjct:    1 MGSPRLAAPQSRASTVLALPLLAAALVLVCASLLPAGAEAMGPNDDGAANNLGLLAQACASSFCGLGVDALDLWLSLEEVCRTGASNQPSLEGGGEMEFGGVHGGGWGTAAAEGGGRGGDWSASSTALVCGGVLAVSALVGFRSGIKVGTWTKEGYPVA 159
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10633.588.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LLS8_ECTSI1.680e-9392.45Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 39..158
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..38
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 16..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 35..38
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..40
score: 0.851
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
NoneNo IPR availableTMHMMTMhelixcoord: 123..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10633contigEcto-sp13_S_contig10633:2887..5086 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10633.588.1mRNA_Ecto-sp13_S_contig10633.588.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10633 1658..5127 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10633.588.1 ID=prot_Ecto-sp13_S_contig10633.588.1|Name=mRNA_Ecto-sp13_S_contig10633.588.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=159bp
MVYPRRAAPQSRAGTVLALPLLAAALVLLCASLLPAGAEAMGPNDDGAGN
NLGLLAQACASSFCGLGVDALDLWLSLEEVCRTGASNQPSLEGGGEIELG
GVYGRGWGTAAAEGGRGGDWSASSTALVCGGVLAVSALMGFRSGIKVGTW
TKEGYPVA*
back to top