prot_Ecto-sp13_S_contig10626.584.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10626.584.1
Unique Nameprot_Ecto-sp13_S_contig10626.584.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length534
Homology
BLAST of mRNA_Ecto-sp13_S_contig10626.584.1 vs. uniprot
Match: A0A6H5JW67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW67_9PHAE)

HSP 1 Score: 416 bits (1070), Expect = 3.230e-136
Identity = 410/537 (76.35%), Postives = 421/537 (78.40%), Query Frame = 0
Query:    1 GGAGAGARPSSAAQEVGKAARQGQAGRVDGILMWGRSELPNGLEGEQFFPDVVPKVDPVDFHDAGEEESGNYDLVEDLHTEETYKVAKDQALEFYASGSGPRLERARARAARAAKNEKGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSFVRSSGEGGXDXXXXXXXXXXXXXXGYSSYGGRXXXXXXXXXXXXXXG---GTKKKDDGTXXXXXXXXXXXREEAVEEDLERYWSETPSGVFASSSSXXXXXXXXXXXXXXXXARPIAASAASRADKSGDGVGGNKAARPRLGGASGRANGTSGSGDAALDDGGRVVGADSASGGVAGASVQANGGTSGASAERVRAGENDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGLLGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGGDDGLDGPGAVQLLGLKAEFMPVSQGAWEDAVCLGDSGESDAESRRRSPVGGRSRSSPVLTSMDVSASGCDEERXXXXXXXXXXXXXDEGKGRDR 534
            GG GAG RPSSAAQEVGKAARQGQAGRVDGIL+WGRSELPNGLEGEQFFPDVVPKVDPVDFHD+GEEESGNYDLVEDL TEETYKVAKDQALEFYASGSGPRLERA              XXXXXXXXXXXX                 XXXXXXXXXXX   VRSSG   X XXXXXXXXXXXXXX        XXXXXXXXXXXX  G   GTKKKDDG  XXXXXXXXXXREEA+EEDLERYWSETPSGVFASSS XXXXXXXXXXXXX   AR IAA+AAS AD+SGD VGGN AARPRLG A+GRANG SGSGDA+L++ G VVGA SASGGV            GASAE+VRAGENDM XXXXXXXXXXXXXXXXXXXXXXXXX           X   L+   XXXXXXXXXXXXXXXXXXXXXXX      RGG DDGLDGPGAVQLLGLKAEFMPVSQGAWEDAVCLGDSG SDAESRRRSPVGGRSRSSPV T MDVSA GCDEER XXXXXXXX    DEGK RDR
Sbjct:    4 GGTGAGDRPSSAAQEVGKAARQGQAGRVDGILLWGRSELPNGLEGEQFFPDVVPKVDPVDFHDSGEEESGNYDLVEDLVTEETYKVAKDQALEFYASGSGPRLERAXXXXXXXXXXXXXXXXXXXXXXXXXXASGGTSSGLVPRQGSSDXXXXXXXXXXXXXXVRSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGENGGTKKKDDGADXXXXXXXXXXREEALEEDLERYWSETPSGVFASSSXXXXXXXXXXXXXXRPDARLIAATAASGADQSGDRVGGNGAARPRLGAATGRANGASGSGDASLENRGGVVGAYSASGGVXXXXXXXXXXXXGASAEKVRAGENDMDXXXXXXXXXXXXXXXXXXXXXXXXXGVDARQSQRDSXXXXLIRXXXXXXXXXXXXXXXXXXXXXXXXXKEDEGRRGGSDDGLDGPGAVQLLGLKAEFMPVSQGAWEDAVCLGDSGGSDAESRRRSPVGGRSRSSPVPTPMDVSAPGCDEEREXXXXXXXXAKRKDEGKRRDR 540          
BLAST of mRNA_Ecto-sp13_S_contig10626.584.1 vs. uniprot
Match: D7FIW7_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIW7_ECTSI)

HSP 1 Score: 287 bits (734), Expect = 3.370e-81
Identity = 235/497 (47.28%), Postives = 239/497 (48.09%), Query Frame = 0
Query:    1 GGAGAGARPSSAAQEVGKAARQGQAGRVDGILMWGRSELPNGLEGEQFFPDVVPKVDPVDFHDAGEEESGNYDLVEDLHTEETYKVAKDQALEFYASGSGPRLERARARAARAAKNEKGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSFVRSSGEGGXDXXXXXXXXXXXXXXGYSSYGGRXXXXXXXXXXXXXXGGTKKKDDGTXXXXXXXXXXXREEAVEEDLERYWSETPSGVFASSSSXXXXXXXXXXXXXXXXARPIAASAASRADKSGDGVGGNKAARPRLGGASGRANGTSGSGDAALDDGGRVVGADSASGGVAGASVQANGGTSGASAERVRAGENDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGLLGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGGDDGLDGPGAVQLLGLKAEFMPVSQGAWEDAVCLGDSGESDAESRRRSPVGGRSRSSP 497
            GGAGAGARPSS AQEVGKAARQGQAGRV GILMWGRSELPNGLEGE FFPDVVPKVDPVDFHDAGEEESGNYDLVEDL TEETYK                                                                                                                                                                                           AR +AA+AAS ADKSGDGVGGN AARPRLGGASGRANGTS            VVGADSAS GVAGASVQANGGTSGASAER+RAGENDM                                      G+GL G      XXXXXXXXXXXXXXXXXXX      RGGGDDGLDGPGAVQLLGLKAEFMPVSQGAWEDAVCLGDSGESDAESRRRSPVGGRSRSSP
Sbjct:   10 GGAGAGARPSSVAQEVGKAARQGQAGRVGGILMWGRSELPNGLEGEHFFPDVVPKVDPVDFHDAGEEESGNYDLVEDLVTEETYKPE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ARHMAATAASEADKSGDGVGGNGAARPRLGGASGRANGTSXXXXXXXXXXXXVVGADSASXGVAGASVQANGGTSGASAERIRAGENDMDVDEEEEGGSVAEKGKGPARRPAAARGVDARQSQRESEGKGLAGEVDSDDXXXXXXXXXXXXXXXXXXXKGGEDGRGGGDDGLDGPGAVQLLGLKAEFMPVSQGAWEDAVCLGDSGESDAESRRRSPVGGRSRSSP 321          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10626.584.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JW67_9PHAE3.230e-13676.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIW7_ECTSI3.370e-8147.28Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10626contigEcto-sp13_S_contig10626:2251..4769 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10626.584.1mRNA_Ecto-sp13_S_contig10626.584.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10626 2251..4770 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10626.584.1 ID=prot_Ecto-sp13_S_contig10626.584.1|Name=mRNA_Ecto-sp13_S_contig10626.584.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=534bp
GGAGAGARPSSAAQEVGKAARQGQAGRVDGILMWGRSELPNGLEGEQFFP
DVVPKVDPVDFHDAGEEESGNYDLVEDLHTEETYKVAKDQALEFYASGSG
PRLERARARAARAAKNEKGRRRRRRPGGGSGNVSGGTSSGLVPRQGSSDD
DGNGGGSGGGFSFVRSSGEGGGDGSASSSGDSSSSSSGYSSYGGRSGSGS
GSDTSDGENGGTKKKDDGTDGLEGAGGRGGREEAVEEDLERYWSETPSGV
FASSSSSSSSTSSDSEAEPRPEARPIAASAASRADKSGDGVGGNKAARPR
LGGASGRANGTSGSGDAALDDGGRVVGADSASGGVAGASVQANGGTSGAS
AERVRAGENDMDVDEEEGGGSTADKGKGPARRRAAARSVDARQSQRDSEG
RGLLGGADSDDDEESSGSETERDSSGDGDGEGDEEGRGGGDDGLDGPGAV
QLLGLKAEFMPVSQGAWEDAVCLGDSGESDAESRRRSPVGGRSRSSPVLT
SMDVSASGCDEEREEGGGAAATSKKKDEGKGRDR
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