prot_Ecto-sp13_S_contig10620.579.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10620.579.1
Unique Nameprot_Ecto-sp13_S_contig10620.579.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length265
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10620.579.1 vs. uniprot
Match: A0A6H5K4R3_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4R3_9PHAE)

HSP 1 Score: 458 bits (1178), Expect = 5.520e-146
Identity = 224/264 (84.85%), Postives = 241/264 (91.29%), Query Frame = 0 
Query:    1 MLMEIKKARTKQDTRSLTYLHVEKALGDPTGREFRDVVEKLEKFDYRLYGIKVMGQGGEGKSRPGQTGTLVRNVHKKKTGEATRFFMVEDTRYNGFDIQWKGCGGASVFSTRDVLCGAERYGGNQGVTSPKDGDTRALLLLRGVLCMVNFQLQKYVVDDDRKIKRWGDTVTLPKEVCKTTLSLRMDAWRGIQAASLADTMTEYEESIIGKSGGGLLEEARCDGSLLVALGLGQYRATDTTGFVTNGYRFHNRYTTFVNHFVRGA 264
            ML EIKKARTKQDTRSLTYLH+EKALGDPTGR+F DVVEKLEKFDYRLYGIKVMGQGG  +SRPGQ GTLVR+VH+KKTGE TRFF+ EDT YNGF+IQWKGCGG SV+STRDVLCGAERYGGNQGVTSPKD D R LL LRGVLCMVN Q+QKYV+DDDRKIKR  D VTLPKEVCK TLSLRMDAW+GIQA SLADTMTEYEESI+GKSGGGLLEEAR DGSL +ALGL +YRAT+TTGFVTNGYRFH+R+ TFVNHFVRGA
Sbjct:  719 MLAEIKKARTKQDTRSLTYLHIEKALGDPTGRDFSDVVEKLEKFDYRLYGIKVMGQGGRVRSRPGQKGTLVRDVHRKKTGEVTRFFVDEDTGYNGFEIQWKGCGGTSVYSTRDVLCGAERYGGNQGVTSPKDDDARVLLFLRGVLCMVNVQVQKYVIDDDRKIKRRRDAVTLPKEVCKKTLSLRMDAWKGIQAVSLADTMTEYEESILGKSGGGLLEEARRDGSLFMALGLDRYRATNTTGFVTNGYRFHDRHMTFVNHFVRGA 982
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10620.579.1 vs. uniprot
Match: A0A6H5L2T9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2T9_9PHAE)

HSP 1 Score: 364 bits (934), Expect = 2.060e-122
Identity = 176/212 (83.02%), Postives = 191/212 (90.09%), Query Frame = 0 
Query:   53 VMGQGGEGKSRPGQTGTLVRNVHKKKTGEATRFFMVEDTRYNGFDIQWKGCGGASVFSTRDVLCGAERYGGNQGVTSPKDGDTRALLLLRGVLCMVNFQLQKYVVDDDRKIKRWGDTVTLPKEVCKTTLSLRMDAWRGIQAASLADTMTEYEESIIGKSGGGLLEEARCDGSLLVALGLGQYRATDTTGFVTNGYRFHNRYTTFVNHFVRGA 264
            VMGQGG G+SRPGQ GTLVR+VH+KKTGE TRFF+ EDT YNGF+IQWKGCGG SV+STRDVLCGAERYGGNQGVTSPKD D R LL LRGVLCMVN Q+QKYV+DDDRKIKR  D VTLPKEVCK TLSLRMDAW+GIQA SLADTMTEYEESI+GKSGGGLLEE R DGSL +ALGLG+YRAT+TTGFVTNG RFH+R+ TFVNHFVRGA
Sbjct:    2 VMGQGGRGRSRPGQKGTLVRDVHRKKTGEVTRFFVDEDTGYNGFEIQWKGCGGTSVYSTRDVLCGAERYGGNQGVTSPKDDDARVLLFLRGVLCMVNVQVQKYVIDDDRKIKRRRDAVTLPKEVCKKTLSLRMDAWKGIQAVSLADTMTEYEESILGKSGGGLLEEGRRDGSLFMALGLGRYRATNTTGFVTNGCRFHDRHMTFVNHFVRGA 213
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10620.579.1 vs. uniprot
Match: A0A6H5K5Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5Y8_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 3.380e-26
Identity = 56/63 (88.89%), Postives = 59/63 (93.65%), Query Frame = 0 
Query:    1 MLMEIKKARTKQDTRSLTYLHVEKALGDPTGREFRDVVEKLEKFDYRLYGIKVMGQGGEGKSR 63
            ML EIKKARTKQDTRSLTYLH+EKALGDPTGR+F DVVEKLEKFDY LYGIKVMGQGG G+SR
Sbjct:  311 MLAEIKKARTKQDTRSLTYLHIEKALGDPTGRDFSDVVEKLEKFDYGLYGIKVMGQGGRGRSR 373
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10620.579.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K4R3_9PHAE5.520e-14684.85PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5L2T9_9PHAE2.060e-12283.02Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K5Y8_9PHAE3.380e-2688.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10620contigEcto-sp13_S_contig10620:910..1704 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10620.579.1mRNA_Ecto-sp13_S_contig10620.579.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10620 229..2228 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10620.579.1 ID=prot_Ecto-sp13_S_contig10620.579.1|Name=mRNA_Ecto-sp13_S_contig10620.579.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=265bp
MLMEIKKARTKQDTRSLTYLHVEKALGDPTGREFRDVVEKLEKFDYRLYG
IKVMGQGGEGKSRPGQTGTLVRNVHKKKTGEATRFFMVEDTRYNGFDIQW
KGCGGASVFSTRDVLCGAERYGGNQGVTSPKDGDTRALLLLRGVLCMVNF
QLQKYVVDDDRKIKRWGDTVTLPKEVCKTTLSLRMDAWRGIQAASLADTM
TEYEESIIGKSGGGLLEEARCDGSLLVALGLGQYRATDTTGFVTNGYRFH
NRYTTFVNHFVRGA*
back to top