prot_Ecto-sp13_S_contig10619.576.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10619.576.1
Unique Nameprot_Ecto-sp13_S_contig10619.576.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length104
Homology
BLAST of mRNA_Ecto-sp13_S_contig10619.576.1 vs. uniprot
Match: D7FL11_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL11_ECTSI)

HSP 1 Score: 150 bits (379), Expect = 2.900e-45
Identity = 78/103 (75.73%), Postives = 78/103 (75.73%), Query Frame = 0
Query:    1 MPIRSWFPNMVMAMISGPSRSRPAQASFKIQPKMTKWEVKEYLTKIYNVPVKKVMTQNFEGKRXXXXXXXXIVXXXXXXXXXXXXXXESPQWTQNKGPRSLPS 103
            MPIRSWFPNMVMAMISGPSRSRPAQASFKIQPKMTKWEVKEYLTKIYNVPVKKVMTQNFEGKR        IV               SPQWT NKGP SLPS
Sbjct:    1 MPIRSWFPNMVMAMISGPSRSRPAQASFKIQPKMTKWEVKEYLTKIYNVPVKKVMTQNFEGKRKRIMGKRSIVPYKRPNFKKAIVTFASPQWTPNKGPPSLPS 103          
BLAST of mRNA_Ecto-sp13_S_contig10619.576.1 vs. uniprot
Match: A0A835YVT8_9STRA (Ribosomal protein L23/L15e core domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVT8_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 5.230e-20
Identity = 39/63 (61.90%), Postives = 50/63 (79.37%), Query Frame = 0
Query:    1 MPIRSWFPNMVMAMISGPSRSRPAQASFKIQPKMTKWEVKEYLTKIYNVPVKKVMTQNFEGKR 63
            M ++ WFP+  M +++ P+R RP QA+F++ PKMTK EVKEYL K+Y VPVKKVMTQNF GKR
Sbjct:    1 MGVKEWFPSFFMQLVTMPTRGRPQQAAFRVSPKMTKLEVKEYLLKVYGVPVKKVMTQNFLGKR 63          
BLAST of mRNA_Ecto-sp13_S_contig10619.576.1 vs. uniprot
Match: A0A7S3QJC9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJC9_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 4.430e-14
Identity = 35/62 (56.45%), Postives = 46/62 (74.19%), Query Frame = 0
Query:    4 RSWFPNMVMAM--ISGPSRSRPAQASFKIQPKMTKWEVKEYLTKIYNVPVKKVMTQNFEGKR 63
            R W PNM + +      +++ PA A+F+++PKMTK E+KEYLTKIYN+PVKKV T NF GKR
Sbjct:   11 RVWMPNMPILLDGAKNATKTAPATATFRVKPKMTKHEIKEYLTKIYNLPVKKVNTANFAGKR 72          
BLAST of mRNA_Ecto-sp13_S_contig10619.576.1 vs. uniprot
Match: A0A1E7FSR6_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FSR6_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 2.900e-13
Identity = 33/62 (53.23%), Postives = 47/62 (75.81%), Query Frame = 0
Query:    4 RSWFPNMVMAMISGPSRS--RPAQASFKIQPKMTKWEVKEYLTKIYNVPVKKVMTQNFEGKR 63
            R W PNM M M+S  + +  +PA+A+F++ P+MTK E+KEYLTKIY +PV++V T N+ GKR
Sbjct:   13 RMWMPNMPMLMVSAKNATARQPARATFRVLPRMTKHEIKEYLTKIYGLPVRQVNTSNYMGKR 74          
BLAST of mRNA_Ecto-sp13_S_contig10619.576.1 vs. uniprot
Match: A0A448YYR3_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YYR3_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 4.900e-13
Identity = 33/62 (53.23%), Postives = 47/62 (75.81%), Query Frame = 0
Query:    4 RSWFPNMVMAMISGPSRS--RPAQASFKIQPKMTKWEVKEYLTKIYNVPVKKVMTQNFEGKR 63
            R W PNM M ++S  + +  +PA+A+F++ P+MTK E+KEYLTKIY +PV+KV T N+ GKR
Sbjct:   10 RMWMPNMPMMLVSAKNATARQPARATFRVLPRMTKHEIKEYLTKIYGLPVQKVNTANYLGKR 71          
BLAST of mRNA_Ecto-sp13_S_contig10619.576.1 vs. uniprot
Match: K0TJH6_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TJH6_THAOC)

HSP 1 Score: 68.9 bits (167), Expect = 1.010e-12
Identity = 34/62 (54.84%), Postives = 45/62 (72.58%), Query Frame = 0
Query:    4 RSWFPNMVMAMISGPSRS--RPAQASFKIQPKMTKWEVKEYLTKIYNVPVKKVMTQNFEGKR 63
            R W P+M + ++   + +   PAQA+F++ PKMTK EVKEYLTKIY +PV KV TQN+ GKR
Sbjct:   28 RMWMPHMPLVLLDAQNATLDTPAQATFRVLPKMTKHEVKEYLTKIYGLPVVKVRTQNYMGKR 89          
BLAST of mRNA_Ecto-sp13_S_contig10619.576.1 vs. uniprot
Match: B7FPJ8_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FPJ8_PHATC)

HSP 1 Score: 68.9 bits (167), Expect = 1.130e-12
Identity = 35/62 (56.45%), Postives = 45/62 (72.58%), Query Frame = 0
Query:    4 RSWFPNMVMAMISGPSRSR--PAQASFKIQPKMTKWEVKEYLTKIYNVPVKKVMTQNFEGKR 63
            R W P+M + M+S  S +   PA A F+  P+MTK E+KEYLTKIY++PVKKV T N+EGKR
Sbjct:   16 RMWMPSMPLTMVSARSATANGPAFAIFRTVPRMTKHEIKEYLTKIYDLPVKKVNTMNYEGKR 77          
BLAST of mRNA_Ecto-sp13_S_contig10619.576.1 vs. uniprot
Match: A0A7S2AUA8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AUA8_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.170e-12
Identity = 35/61 (57.38%), Postives = 44/61 (72.13%), Query Frame = 0
Query:    4 RSWFPNMVMAMISGP--SRSRPAQASFKIQPKMTKWEVKEYLTKIYNVPVKKVMTQNFEGK 62
            R +FPNM MA++S       RP QA FK+ P MTK +++EYL KIY +PVKKVMT NF+GK
Sbjct:   18 REFFPNMYMALLSVRYLKSPRPTQAVFKVAPSMTKNDIQEYLRKIYGLPVKKVMTANFDGK 78          
BLAST of mRNA_Ecto-sp13_S_contig10619.576.1 vs. uniprot
Match: A0A7S4IBC0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IBC0_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.320e-12
Identity = 34/62 (54.84%), Postives = 43/62 (69.35%), Query Frame = 0
Query:    4 RSWFPNMVMAMISGPS--RSRPAQASFKIQPKMTKWEVKEYLTKIYNVPVKKVMTQNFEGKR 63
            R W P M + ++   S   S+ A A F++ PKMTK E+KEYLTKIYN+PVKKV T N+ GKR
Sbjct:   11 RMWMPTMPITLVKARSANESQSAMAVFRVMPKMTKHEIKEYLTKIYNLPVKKVNTMNYLGKR 72          
BLAST of mRNA_Ecto-sp13_S_contig10619.576.1 vs. uniprot
Match: A0A6U3SB59_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3SB59_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 2.770e-12
Identity = 34/63 (53.97%), Postives = 46/63 (73.02%), Query Frame = 0
Query:    3 IRSWFPNMVMAMISG--PSRSRPAQASFKIQPKMTKWEVKEYLTKIYNVPVKKVMTQNFEGKR 63
            +R W PNM + ++S    + +  A A+F++ PKMTK EVKE+LTKIYN+PV KV TQN+ GKR
Sbjct:   11 LRVWMPNMPIVLLSARNATETSAATATFRVLPKMTKHEVKEHLTKIYNLPVAKVNTQNYLGKR 73          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10619.576.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL11_ECTSI2.900e-4575.73Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YVT8_9STRA5.230e-2061.90Ribosomal protein L23/L15e core domain-containing ... [more]
A0A7S3QJC9_9STRA4.430e-1456.45Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A1E7FSR6_9STRA2.900e-1353.23Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A448YYR3_9STRA4.900e-1353.23Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
K0TJH6_THAOC1.010e-1254.84Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
B7FPJ8_PHATC1.130e-1256.45Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S2AUA8_9STRA1.170e-1257.38Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S4IBC0_9STRA1.320e-1254.84Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A6U3SB59_9STRA2.770e-1253.97Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 1..100
e-value: 6.0E-25
score: 90.0
IPR013025Ribosomal protein L25/L23PFAMPF00276Ribosomal_L23coord: 24..88
e-value: 1.2E-16
score: 60.8
NoneNo IPR availablePANTHERPTHR12059:SF539S RIBOSOMAL PROTEIN L23, MITOCHONDRIALcoord: 4..92
NoneNo IPR availablePANTHERPTHR12059RIBOSOMAL PROTEIN L23-RELATEDcoord: 4..92
IPR012678Ribosomal protein L23/L15e core domain superfamilySUPERFAMILY54189Ribosomal proteins S24e, L23 and L15ecoord: 23..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10619contigEcto-sp13_S_contig10619:3680..5739 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10619.576.1mRNA_Ecto-sp13_S_contig10619.576.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10619 3680..5739 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10619.576.1 ID=prot_Ecto-sp13_S_contig10619.576.1|Name=mRNA_Ecto-sp13_S_contig10619.576.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=104bp
MPIRSWFPNMVMAMISGPSRSRPAQASFKIQPKMTKWEVKEYLTKIYNVP
VKKVMTQNFEGKRKRIMGKRSIVPYKRPNFKKAIVTFESPQWTQNKGPRS
LPS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012677Nucleotide-bd_a/b_plait_sf
IPR013025Ribosomal_L25/23
IPR012678Ribosomal_L23/L15e_core_dom_sf