prot_Ecto-sp13_S_contig10590.548.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10590.548.1
Unique Nameprot_Ecto-sp13_S_contig10590.548.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length568
Homology
BLAST of mRNA_Ecto-sp13_S_contig10590.548.1 vs. uniprot
Match: D8LRK3_ECTSI (TFIIS N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRK3_ECTSI)

HSP 1 Score: 663 bits (1710), Expect = 4.490e-232
Identity = 490/570 (85.96%), Postives = 495/570 (86.84%), Query Frame = 0
Query:    1 MDDVFGSDSSANEFDPAEEADNNNNEDAPSGGAGALDSDGDDDEGMTRNKPGASPTDAGAAXXXXXXXXXXXXXXXAFPADADAEKLAMDADVFGSDSEDEVAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGKTLGKTGGGRLSKGGSSGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGDVEEGAEGGSSKKTTXXXXXXXXXXXXXXXTSVESSTLQDLGLESSADEAAQDXXXXXXXLSDAE--VEHQDEEDEGIGGDAGEEVARAPNKRTKEDDDFIXXXXXXXXLLNEYKQDEPEGGDHSEAEEDNNPENFHDAPKKESAMTAVLASMKKRKAQDLSTAEREQIAQEFMFKINQAAEDDEEAVQNGRPAIYKIKMIRVVKATLAKKELQETFLEFDLLGVLKRWLQPYSNGQLPNLTVRTDILKLIENLPVQVDHLKRSGIGKVVMGLLNCGEETTENKRRLRQLVSKWNRPVYEKETNYRARRPAQDDLEAMEVPSRGGGGAAGSGVRRRVVHGSMRRDGASKDEAVGNILNARARGLDPTKA 568
            MDDVFGSDSSANEFDPAEEADNNNNEDAPSGGAGALDSDGDDDEGMT NKPGASPTD GAA XXXXXXXXXXXXXXAFPADADAEKLAMDADVFGSDSE+EV  XXXXXXXXXX                   GGKTLGKTGG RLSKG SSGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGDVEEG EGGSSKKTT XXXXXXXXXXXXXX      TLQDLGLESSADEAAQ XXXXXXX       VEH+DEEDEG+GGD GEEV RAPNKRT+E     XXXXXXXX              HSEAEEDNNPENFHDAPKKESAMTAVLASMKKRKAQDLSTAEREQIAQEFMFKINQAAEDDEEAVQNGRPAIYKIKMIRVVKATLAKKELQETFLEFDLLGVLKRWLQPYSNGQLPNLTVRTDILKLIENLPVQVDHLKRSGIGKVVMGLLNC EETTENKRRLRQLVSKWNRPVYEKETNYRARRPAQDDLEAMEVP+RGG           VVHGSMRRDGASKDEAVGNILNARARGLDPTKA
Sbjct:    1 MDDVFGSDSSANEFDPAEEADNNNNEDAPSGGAGALDSDGDDDEGMTSNKPGASPTDVGAALXXXXXXXXXXXXXXAFPADADAEKLAMDADVFGSDSEEEVXXXXXXXXXXXXTAVADVDPFEESDDEEGGSGGKTLGKTGGDRLSKGDSSGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGDVEEGVEGGSSKKTTKXXXXXXXXXXXXXXXXXXXXTLQDLGLESSADEAAQXXXXXXXXXXXXXXXVEHEDEEDEGLGGDGGEEVVRAPNKRTREXXXXXXXXXXXXXXXXXXXXXXXXXXXHSEAEEDNNPENFHDAPKKESAMTAVLASMKKRKAQDLSTAEREQIAQEFMFKINQAAEDDEEAVQNGRPAIYKIKMIRVVKATLAKKELQETFLEFDLLGVLKRWLQPYSNGQLPNLTVRTDILKLIENLPVQVDHLKRSGIGKVVMGLLNCREETTENKRRLRQLVSKWNRPVYEKETNYRARRPAQDDLEAMEVPTRGGXXXXXXXXXXXVVHGSMRRDGASKDEAVGNILNARARGLDPTKA 570          
BLAST of mRNA_Ecto-sp13_S_contig10590.548.1 vs. uniprot
Match: A0A2D4BW91_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BW91_PYTIN)

HSP 1 Score: 153 bits (387), Expect = 1.230e-35
Identity = 93/227 (40.97%), Postives = 131/227 (57.71%), Query Frame = 0
Query:  280 DAGEEVARAPNKRTKEDDDFIXXXXXXXXLLNEYKQDEPEGGDHSEAEEDNNPENFHDAPKKESAMTAVLASMK--KRKAQDLSTAEREQIAQEFMFKINQAAEDDEEAVQNGRPAIYKIKMIRVVKATLAKKELQETFLEFDLLGVLKRWLQPYSNGQLPNLTVRTDILKLIENLPVQVDHLKRSGIGKVVMGLLNCGEETTENKRRLRQLVSKWNRPVYEKETNY 504
            D+G+EV R     T+EDD+FI        +L EY Q++ +  D    E+D          K E      L S+K  +R    LS  E+EQI QE ++++++A  DD  ++   RPA+ +IK +      L K +LQ TFL+FDLL  +K+W+QP  +G LPNL VRT +L ++  LPV  +HLKRSG GKVVM L    EET ENK   R L+ +W+R V+EK  +Y
Sbjct:  654 DSGDEVVR-----TREDDEFIDQEDDLADVLGEYDQEDQKFDDERPLEDDPRQPG---RTKDEDYFEQTLKSLKTGRRSKMQLSVQEQEQIVQEVLYRLDKAHADDLASIAERRPALERIKYVDEAVRVLRKHQLQPTFLDFDLLSFIKKWIQPLDDGTLPNLGVRTKLLHMVARLPVMKEHLKRSGFGKVVMMLWKHPEETRENKELCRDLIERWSRAVFEKTLDY 872          
BLAST of mRNA_Ecto-sp13_S_contig10590.548.1 vs. uniprot
Match: A0A485LKM7_9STRA (Aste57867_22366 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LKM7_9STRA)

HSP 1 Score: 148 bits (373), Expect = 1.710e-35
Identity = 95/269 (35.32%), Postives = 147/269 (54.65%), Query Frame = 0
Query:  280 DAGEEVARAPNKRTKEDDDFIXXXXXXXXLLNEYKQDEPEGGDHSEAEEDNNPENFHDAPKKESAMTAVLASMKKRKAQD---LSTAEREQIAQEFMFKINQAAEDDEEAVQNGRPAIYKIKMIRVVKATLAKKELQETFLEFDLLGVLKRWLQPYSNGQLPNLTVRTDILKLIENLPVQVDHLKRSGIGKVVMGLLNCGEETTENKRRLRQLVSKWNRPVYEKETNYRARRPAQDDLEAMEVPSR-GGGGAAGSGVRRRVVHGSMRRD 544
            D+GEEV     +RTK+D+ FI        +L+EY QD     D    EE+   + F    + E      + SMK  + +    +S  E E + QE ++ +++A  DD  A+   RPA+ K+K++  V   + K +LQ+  L+FDLLGV+K+W+QP  NG LPNL +RT ++++ + LP+  +HLKRSG GKV+M L    +E+ ENK   RQL+ +W+R V+ K  ++         L  +E   R   GG  G   RR+    +M R+
Sbjct:   90 DSGEEV-----ERTKDDEAFIDDEDDLGGVLDEYNQDNQTFDDERPEEEE---DRFTRRREAEDFFDETMKSMKSGRGRSKLKMSQQEIETLTQEVLYNMDKAYNDDLVAMDERRPALEKLKLVDKVLLLMRKVQLQQPLLDFDLLGVIKKWIQPMENGSLPNLGLRTKMIEICQRLPIDKEHLKRSGFGKVIMTLWKHPDESVENKEICRQLIDRWSRSVFSKTLDF-------SKLGELEAEKREANGGMRGPAERRQQASRAMERN 343          
BLAST of mRNA_Ecto-sp13_S_contig10590.548.1 vs. uniprot
Match: A0A835YPY7_9STRA (TFIIS N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPY7_9STRA)

HSP 1 Score: 140 bits (353), Expect = 2.830e-34
Identity = 75/165 (45.45%), Postives = 108/165 (65.45%), Query Frame = 0
Query:  352 MKKRKAQDLSTAEREQIAQEFMFKINQAAEDDEEAVQNGRPAIYKIKMIRVVKATLAKKELQETFLEFDLLGVLKRWLQPYSN-GQLPNLTVRTDILKLIENLPVQVDHLKRSGIGKVVMGLLNCGEETTENKRRLRQLVSKWNRPVYEKETNYRARRPAQDDLE 515
            MK+ + Q LS AER+  AQ+FM  ++ AA +DE  V+ G+PA  KIK ++ V+ TL+K++L ET LE DLL  +K+W+ PY   G LP+L VR  +  ++  LPV+ +HLKRS +G  +M +    EET ENKR L QL+ KW RP+Y K T+ R     Q+++E
Sbjct:    1 MKRIRGQQLSIAERDTFAQDFMHFMDTAAAEDERLVREGKPAFAKIKALKAVQRTLSKQDLWETLLEVDLLTGVKKWISPYEGRGTLPSLDVRKAMYAILLTLPVEKEHLKRSQLGMTIMAMKQHPEETAENKRTLAQLIEKWCRPIYNKGTDLRELSRVQEEIE 165          
BLAST of mRNA_Ecto-sp13_S_contig10590.548.1 vs. uniprot
Match: A0A8K1CB40_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CB40_PYTOL)

HSP 1 Score: 146 bits (369), Expect = 7.500e-34
Identity = 89/227 (39.21%), Postives = 132/227 (58.15%), Query Frame = 0
Query:  280 DAGEEVARAPNKRTKEDDDFIXXXXXXXXLLNEYKQDEPEGGDHSEAEEDNNPENFHDAPKKESAMTAVLASMK--KRKAQDLSTAEREQIAQEFMFKINQAAEDDEEAVQNGRPAIYKIKMIRVVKATLAKKELQETFLEFDLLGVLKRWLQPYSNGQLPNLTVRTDILKLIENLPVQVDHLKRSGIGKVVMGLLNCGEETTENKRRLRQLVSKWNRPVYEKETNY 504
            D+G+E+ R     TK+DD FI        +L EY +D+ +  D     ED          K+E      L S+K  +R   +LS  E+EQI QE ++++++A  DD  ++   +PA+ +IK +      L K++LQ TFL+FDLL  +K+W+QP  +G LPNL VRT +L ++  LPV  +HLKRSG GKVVM L    EET +NK   R L+ +W+R V++K  +Y
Sbjct:  293 DSGDEIVR-----TKDDDAFIDQDDDLEDVLGEYDEDDQKFEDERPLPEDVG------GRKEEDYFEETLKSLKTGRRAKMNLSVQEQEQIVQEVLYRMDKAHADDLASIAERKPALERIKYVDHAIRVLRKQQLQPTFLDFDLLSFIKKWIQPLEDGTLPNLGVRTKMLHMVARLPVMKEHLKRSGFGKVVMMLWKHPEETRDNKDLCRDLIERWSRAVFDKTLDY 508          
BLAST of mRNA_Ecto-sp13_S_contig10590.548.1 vs. uniprot
Match: F0WGB7_9STRA (Uncharacterized protein AlNc14C90G5648 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WGB7_9STRA)

HSP 1 Score: 142 bits (357), Expect = 3.110e-33
Identity = 78/225 (34.67%), Postives = 130/225 (57.78%), Query Frame = 0
Query:  280 DAGEEVARAPNKRTKEDDDFIXXXXXXXXLLNEYKQDEPEGGDHSEAEEDNNPENFHDAPKKESAMTAVLASMKKRKAQDLSTAEREQIAQEFMFKINQAAEDDEEAVQNGRPAIYKIKMIRVVKATLAKKELQETFLEFDLLGVLKRWLQPYSNGQLPNLTVRTDILKLIENLPVQVDHLKRSGIGKVVMGLLNCGEETTENKRRLRQLVSKWNRPVYEKETNY 504
            D+GEE A      TKEDDDFI        +L EY+Q++ +  D    +       F +    +  + ++    +  K  +LS  + E++ QE +F++++A  +D+ A+ +GRPA  KIK +      + K+ LQ   L+FDLL ++++W+QP  +G LPNL +RT ++ ++  LP+  +HLKRSG GKV+M L    +ET ENK   R+++ +W+R V+ K  +Y
Sbjct:  101 DSGEEAAP-----TKEDDDFIDREDDLADVLGEYEQEKQQFDDERPVDRVEQEAVFEEDTYFDDTLKSLKTGRRSSKM-NLSIQDMERVTQELLFQMDKAWAEDQNAISSGRPAFAKIKFVDHALQIMRKQRLQPMLLDFDLLSIIRKWIQPLGDGALPNLGMRTKMISMVHRLPIYKEHLKRSGFGKVIMTLWKHSDETPENKELCREMIDRWSRSVFNKILDY 319          
BLAST of mRNA_Ecto-sp13_S_contig10590.548.1 vs. uniprot
Match: A0A6G0WK12_9STRA (TFIIS N-terminal domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WK12_9STRA)

HSP 1 Score: 141 bits (355), Expect = 6.220e-33
Identity = 85/245 (34.69%), Postives = 137/245 (55.92%), Query Frame = 0
Query:  280 DAGEEVARAPNKRTKEDDDFIXXXXXXXXLLNEYKQDEPEGGDHSEAEEDNNPENFHDAPKKESAMTAVLASMKKRKAQDLSTAEREQIAQEFMFKINQAAEDDEEAVQNGRPAIYKIKMIRVVKATLAKKELQETFLEFDLLGVLKRWLQPYSNGQLPNLTVRTDILKLIENLPVQVDHLKRSGIGKVVMGLLNCGEETTENKRRLRQLVSKWNRPVYEKETNYRARRPAQDDLEAMEVPSRGG 524
            D+GEE  R     TK+DD FI        +L+EY QD     D    +E +   + H+    E  + ++     + K + +S  E E + QE ++ +++A  DD+ A++  +PA+ K+K++  V     K +LQ   L+FD LGV+K+W+QP  NG LPN+ +RT ++++ + LP+  +HLKRSG GKV+M L     ET ENK   RQL+ +W+R V+ K  ++        +LEA +  + GG
Sbjct:  102 DSGEEAVR-----TKDDDAFIDDEDDLGGVLDEYDQDNQNFDDERPDDEGDRFTSRHEDDYFEETLKSMKTGRGRSKLK-MSQQEIETLVQELLYNMDKAYNDDQVAMEEKKPALQKLKLVNSVLLLARKHQLQLPLLDFDFLGVVKKWIQPMENGLLPNIGLRTKMIEMCQTLPIDKEHLKRSGFGKVIMALWKHPHETPENKEICRQLIDRWSRSVFSKTLDF----TKLSELEAEKREANGG 336          
BLAST of mRNA_Ecto-sp13_S_contig10590.548.1 vs. uniprot
Match: A0A1V9ZKU1_9STRA (TFIIS N-terminal domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZKU1_9STRA)

HSP 1 Score: 143 bits (361), Expect = 1.420e-32
Identity = 86/245 (35.10%), Postives = 133/245 (54.29%), Query Frame = 0
Query:  280 DAGEEVARAPNKRTKEDDDFIXXXXXXXXLLNEYKQDEPEGGDHSEAEEDNNPENFHDAPKKESAMTAVLASMKKRKAQDLSTAEREQIAQEFMFKINQAAEDDEEAVQNGRPAIYKIKMIRVVKATLAKKELQETFLEFDLLGVLKRWLQPYSNGQLPNLTVRTDILKLIENLPVQVDHLKRSGIGKVVMGLLNCGEETTENKRRLRQLVSKWNRPVYEKETNYRARRPAQDDLEAMEVPSRGG 524
            D+GEE  R     TKEDD FI        +LNEY  D+ E  D    E+D         P         L S + +    LS  E E + QE ++++++A  DD +A++  RPA+ K+K +      + K +LQ   L+FDLLG++K+W+QP  +G LPNL++R+ +L + + +P+  +HLKRS  GK +M L    +ET ENK   RQ++ +W+R V+ K  +Y        +LEA +  + GG
Sbjct:   94 DSGEEAVR-----TKEDDAFIDNDDDLDDVLNEYGNDKQEFHDERPDEDDEPSSRRQREPDYFDETLKSLKSGRAKSKMALSQQEMESLTQELLYRMDKAHSDDVQAMEEHRPALEKLKFVDNALMMMRKVQLQPMLLDFDLLGIIKKWIQPMESGTLPNLSLRSKMLDMCQRMPIYKEHLKRSSFGKAIMALWKHPDETPENKELCRQMIDRWSRSVFSKTLDY----SKLAELEAEKREANGG 329          
BLAST of mRNA_Ecto-sp13_S_contig10590.548.1 vs. uniprot
Match: A0A067C2C7_SAPPC (TFIIS N-terminal domain-containing protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067C2C7_SAPPC)

HSP 1 Score: 138 bits (348), Expect = 4.810e-32
Identity = 85/234 (36.32%), Postives = 132/234 (56.41%), Query Frame = 0
Query:  280 DAGEEVARAPNKRTKEDDDFIXXXXXXXXLLNEYKQDEPEGGDHS---EAEEDNNPE------NFHDAPKKESAMTAVLASMKKRKAQDLSTAEREQIAQEFMFKINQAAEDDEEAVQNGRPAIYKIKMIRVVKATLAKKELQETFLEFDLLGVLKRWLQPYSNGQLPNLTVRTDILKLIENLPVQVDHLKRSGIGKVVMGLLNCGEETTENKRRLRQLVSKWNRPVYEKETNY 504
            D+G+EV     KR+K DD FI        +L+EY  D+ E  D     + +ED  PE      +F D   K       L S + +    LS  + E I QE ++++++A  DD +A+   RPA+ K+K +      + K +LQ   L+FDLLG++K+W+QP  NG LP+L++R+ +L + + +P+  +HLKRSG GKVVM L    +ET ENK   R ++ +W+R V+ K  +Y
Sbjct:   93 DSGDEV-----KRSKADDAFIDNDDDLDDVLDEYGNDKQEFHDERPDMDDDEDEAPERQQRELDFFDETMK------GLKSGRAKSKMSLSQQDMENITQELLYRMDKAYSDDVQAIDEHRPALEKLKFVDNALTMMRKVQLQPMLLDFDLLGIIKKWIQPLDNGALPSLSLRSKMLDMCQRMPIYKEHLKRSGFGKVVMSLWKHPDETPENKELCRLMIDRWSRSVFSKTLDY 315          
BLAST of mRNA_Ecto-sp13_S_contig10590.548.1 vs. uniprot
Match: G5AGW9_PHYSP (TFIIS N-terminal domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=G5AGW9_PHYSP)

HSP 1 Score: 138 bits (347), Expect = 4.960e-32
Identity = 96/292 (32.88%), Postives = 149/292 (51.03%), Query Frame = 0
Query:  280 DAGEEVARAPNKRTKEDDDFIXXXXXXXXLLNEYKQDEPEGGDHSEAEEDNNPENFHDAPKKESAMTAVLASMKKRKAQ---DLSTAEREQIAQEFMFKINQAAEDDEEAVQNGRPAIYKIKMIRVVKATLAKKELQETFLEFDLLGVLKRWLQPYSNGQLPNLTVRTDILKLIENLPVQVDHLKRSGIGKVVMGLLNCGEETTENKRRLRQLVSKWNRPVYEKETNYRARRPAQDDLEAMEVPSRGGGGAAGSGVRRRVVHGSMRRDGASKDEAVGNILNARARGLDPTKA 568
            D+GEE        TKEDDDFI        +L EY  D  +  D     ++  PE      +K+      L S+K  +++    LS  E EQI QE ++++++A  DD  ++   RPA+ KIK +      L K + Q   L+FDLL ++K+W+QP  +G LPN+ +RT +L+++  +PV  +HLKRSG+GKVVM L+   +ET ENK   R LV +W+R V+ K  ++      + +    E+  R          R R       ++ A   +   N+ N R+ G +  KA
Sbjct:   76 DSGEEAVA-----TKEDDDFIDGDDDLADVLGEYDDDRQQFDDERPLGDE--PEQTQQ--QKDDFFDRTLKSLKTGRSRTKLSLSPQEMEQITQEVLYRMDKAYADDLASIAERRPALEKIKFVDSALHVLRKLQFQPMLLDFDLLTIVKKWIQPLEDGSLPNVGLRTKMLEMVSKMPVFKEHLKRSGLGKVVMLLMKHPQETPENKELCRSLVERWSRAVFNKTLDFSKLAELEAEKAENEMYRR----------RERARKHKKAKNKAHAGDRGANVFNGRSGGNNDVKA 348          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10590.548.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRK3_ECTSI4.490e-23285.96TFIIS N-terminal domain-containing protein n=2 Tax... [more]
A0A2D4BW91_PYTIN1.230e-3540.97Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]
A0A485LKM7_9STRA1.710e-3535.32Aste57867_22366 protein n=1 Tax=Aphanomyces stella... [more]
A0A835YPY7_9STRA2.830e-3445.45TFIIS N-terminal domain-containing protein n=1 Tax... [more]
A0A8K1CB40_PYTOL7.500e-3439.21Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
F0WGB7_9STRA3.110e-3334.67Uncharacterized protein AlNc14C90G5648 n=1 Tax=Alb... [more]
A0A6G0WK12_9STRA6.220e-3334.69TFIIS N-terminal domain-containing protein n=1 Tax... [more]
A0A1V9ZKU1_9STRA1.420e-3235.10TFIIS N-terminal domain-containing protein n=1 Tax... [more]
A0A067C2C7_SAPPC4.810e-3236.32TFIIS N-terminal domain-containing protein n=3 Tax... [more]
G5AGW9_PHYSP4.960e-3232.88TFIIS N-terminal domain-containing protein n=11 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035441TFIIS/LEDGF domain superfamilyGENE3D1.20.930.10coord: 360..503
e-value: 1.2E-45
score: 156.8
IPR035441TFIIS/LEDGF domain superfamilySUPERFAMILY47676Conserved domain common to transcription factors TFIIS, elongin A, CRSP70coord: 421..503
IPR017923Transcription factor IIS, N-terminalPFAMPF08711Med26coord: 445..497
e-value: 7.1E-13
score: 48.4
IPR017923Transcription factor IIS, N-terminalPROSITEPS51319TFIIS_Ncoord: 423..500
score: 19.281
NoneNo IPR availablePANTHERPTHR46010FAMILY NOT NAMEDcoord: 159..561

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10590contigEcto-sp13_S_contig10590:574..5767 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10590.548.1mRNA_Ecto-sp13_S_contig10590.548.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10590 545..5767 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10590.548.1 ID=prot_Ecto-sp13_S_contig10590.548.1|Name=mRNA_Ecto-sp13_S_contig10590.548.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=568bp
MDDVFGSDSSANEFDPAEEADNNNNEDAPSGGAGALDSDGDDDEGMTRNK
PGASPTDAGAASGGTGLSDSEDDNDEAFPADADAEKLAMDADVFGSDSED
EVAPPPGGGAKNDDTAAADVDPFEESDDEEGGSGGKTLGKTGGGRLSKGG
SSGKGKGKGKKRKADAEGSSKSKRKKGMDGEGEGDNPTKKKKKKKKKKKD
GDVEEGAEGGSSKKTTKKKKGKKKKSKKAKTTSVESSTLQDLGLESSADE
AAQDQDDDDDDLSDAEVEHQDEEDEGIGGDAGEEVARAPNKRTKEDDDFI
DDADDNADLLNEYKQDEPEGGDHSEAEEDNNPENFHDAPKKESAMTAVLA
SMKKRKAQDLSTAEREQIAQEFMFKINQAAEDDEEAVQNGRPAIYKIKMI
RVVKATLAKKELQETFLEFDLLGVLKRWLQPYSNGQLPNLTVRTDILKLI
ENLPVQVDHLKRSGIGKVVMGLLNCGEETTENKRRLRQLVSKWNRPVYEK
ETNYRARRPAQDDLEAMEVPSRGGGGAAGSGVRRRVVHGSMRRDGASKDE
AVGNILNARARGLDPTKA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035441TFIIS/LEDGF_dom_sf
IPR017923TFIIS_N