mRNA_Ecto-sp13_S_contig10590.548.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10590.548.1 vs. uniprot
Match: D8LRK3_ECTSI (TFIIS N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRK3_ECTSI) HSP 1 Score: 664 bits (1713), Expect = 2.200e-232 Identity = 490/570 (85.96%), Postives = 495/570 (86.84%), Query Frame = 3
Query: 30 MDDVFGSDSSANEFDPAEEADNNNNEDAPSGGAGALDSDGDDDEGMTRNKPGASPTDAGAAXXXXXXXXXXXXXXXAFPADADAEKLAMDADVFGSDSEDEVAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGKTLGKTGGGRLSKGGSSGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGDVEEGAEGGSSKKTTXXXXXXXXXXXXXXXTSVESSTLQDLGLESSADEAAQDXXXXXXXLSDAE--VEHQDEEDEGIGGDAGEEVARAPNKRTKEDDDFIXXXXXXXXLLNEYKQDEPEGGDHSEAEEDNNPENFHDAPKKESAMTAVLASMKKRKAQDLSTAEREQIAQEFMFKINQAAEDDEEAVQNGRPAIYKIKMIRVVKATLAKKELQETFLEFDLLGVLKRWLQPYSNGQLPNLTVRTDILKLIENLPVQVDHLKRSGIGKVVMGLLNCGEETTENKRRLRQLVSKWNRPVYEKETNYRARRPAQDDLEAMEVPSRGGGGAAGSGVRRRVVHGSMRRDGASKDEAVGNILNARARGLDPTKA 1733
MDDVFGSDSSANEFDPAEEADNNNNEDAPSGGAGALDSDGDDDEGMT NKPGASPTD GAA XXXXXXXXXXXXXXAFPADADAEKLAMDADVFGSDSE+EV XXXXXXXXXX GGKTLGKTGG RLSKG SSGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGDVEEG EGGSSKKTT XXXXXXXXXXXXXX TLQDLGLESSADEAAQ XXXXXXX VEH+DEEDEG+GGD GEEV RAPNKRT+E XXXXXXXX HSEAEEDNNPENFHDAPKKESAMTAVLASMKKRKAQDLSTAEREQIAQEFMFKINQAAEDDEEAVQNGRPAIYKIKMIRVVKATLAKKELQETFLEFDLLGVLKRWLQPYSNGQLPNLTVRTDILKLIENLPVQVDHLKRSGIGKVVMGLLNC EETTENKRRLRQLVSKWNRPVYEKETNYRARRPAQDDLEAMEVP+RGG VVHGSMRRDGASKDEAVGNILNARARGLDPTKA
Sbjct: 1 MDDVFGSDSSANEFDPAEEADNNNNEDAPSGGAGALDSDGDDDEGMTSNKPGASPTDVGAALXXXXXXXXXXXXXXAFPADADAEKLAMDADVFGSDSEEEVXXXXXXXXXXXXTAVADVDPFEESDDEEGGSGGKTLGKTGGDRLSKGDSSGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGDVEEGVEGGSSKKTTKXXXXXXXXXXXXXXXXXXXXTLQDLGLESSADEAAQXXXXXXXXXXXXXXXVEHEDEEDEGLGGDGGEEVVRAPNKRTREXXXXXXXXXXXXXXXXXXXXXXXXXXXHSEAEEDNNPENFHDAPKKESAMTAVLASMKKRKAQDLSTAEREQIAQEFMFKINQAAEDDEEAVQNGRPAIYKIKMIRVVKATLAKKELQETFLEFDLLGVLKRWLQPYSNGQLPNLTVRTDILKLIENLPVQVDHLKRSGIGKVVMGLLNCREETTENKRRLRQLVSKWNRPVYEKETNYRARRPAQDDLEAMEVPTRGGXXXXXXXXXXXVVHGSMRRDGASKDEAVGNILNARARGLDPTKA 570
BLAST of mRNA_Ecto-sp13_S_contig10590.548.1 vs. uniprot
Match: A0A2D4BW91_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BW91_PYTIN) HSP 1 Score: 153 bits (387), Expect = 1.400e-35 Identity = 93/227 (40.97%), Postives = 131/227 (57.71%), Query Frame = 3
Query: 867 DAGEEVARAPNKRTKEDDDFIXXXXXXXXLLNEYKQDEPEGGDHSEAEEDNNPENFHDAPKKESAMTAVLASMK--KRKAQDLSTAEREQIAQEFMFKINQAAEDDEEAVQNGRPAIYKIKMIRVVKATLAKKELQETFLEFDLLGVLKRWLQPYSNGQLPNLTVRTDILKLIENLPVQVDHLKRSGIGKVVMGLLNCGEETTENKRRLRQLVSKWNRPVYEKETNY 1541
D+G+EV R T+EDD+FI +L EY Q++ + D E+D K E L S+K +R LS E+EQI QE ++++++A DD ++ RPA+ +IK + L K +LQ TFL+FDLL +K+W+QP +G LPNL VRT +L ++ LPV +HLKRSG GKVVM L EET ENK R L+ +W+R V+EK +Y
Sbjct: 654 DSGDEVVR-----TREDDEFIDQEDDLADVLGEYDQEDQKFDDERPLEDDPRQPG---RTKDEDYFEQTLKSLKTGRRSKMQLSVQEQEQIVQEVLYRLDKAHADDLASIAERRPALERIKYVDEAVRVLRKHQLQPTFLDFDLLSFIKKWIQPLDDGTLPNLGVRTKLLHMVARLPVMKEHLKRSGFGKVVMMLWKHPEETRENKELCRDLIERWSRAVFEKTLDY 872
BLAST of mRNA_Ecto-sp13_S_contig10590.548.1 vs. uniprot
Match: A0A485LKM7_9STRA (Aste57867_22366 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LKM7_9STRA) HSP 1 Score: 148 bits (373), Expect = 1.910e-35 Identity = 95/269 (35.32%), Postives = 147/269 (54.65%), Query Frame = 3
Query: 867 DAGEEVARAPNKRTKEDDDFIXXXXXXXXLLNEYKQDEPEGGDHSEAEEDNNPENFHDAPKKESAMTAVLASMKKRKAQD---LSTAEREQIAQEFMFKINQAAEDDEEAVQNGRPAIYKIKMIRVVKATLAKKELQETFLEFDLLGVLKRWLQPYSNGQLPNLTVRTDILKLIENLPVQVDHLKRSGIGKVVMGLLNCGEETTENKRRLRQLVSKWNRPVYEKETNYRARRPAQDDLEAMEVPSR-GGGGAAGSGVRRRVVHGSMRRD 1661
D+GEEV +RTK+D+ FI +L+EY QD D EE+ + F + E + SMK + + +S E E + QE ++ +++A DD A+ RPA+ K+K++ V + K +LQ+ L+FDLLGV+K+W+QP NG LPNL +RT ++++ + LP+ +HLKRSG GKV+M L +E+ ENK RQL+ +W+R V+ K ++ L +E R GG G RR+ +M R+
Sbjct: 90 DSGEEV-----ERTKDDEAFIDDEDDLGGVLDEYNQDNQTFDDERPEEEE---DRFTRRREAEDFFDETMKSMKSGRGRSKLKMSQQEIETLTQEVLYNMDKAYNDDLVAMDERRPALEKLKLVDKVLLLMRKVQLQQPLLDFDLLGVIKKWIQPMENGSLPNLGLRTKMIEICQRLPIDKEHLKRSGFGKVIMTLWKHPDESVENKEICRQLIDRWSRSVFSKTLDF-------SKLGELEAEKREANGGMRGPAERRQQASRAMERN 343
BLAST of mRNA_Ecto-sp13_S_contig10590.548.1 vs. uniprot
Match: A0A835YPY7_9STRA (TFIIS N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPY7_9STRA) HSP 1 Score: 140 bits (353), Expect = 3.120e-34 Identity = 75/165 (45.45%), Postives = 108/165 (65.45%), Query Frame = 3
Query: 1083 MKKRKAQDLSTAEREQIAQEFMFKINQAAEDDEEAVQNGRPAIYKIKMIRVVKATLAKKELQETFLEFDLLGVLKRWLQPYSN-GQLPNLTVRTDILKLIENLPVQVDHLKRSGIGKVVMGLLNCGEETTENKRRLRQLVSKWNRPVYEKETNYRARRPAQDDLE 1574
MK+ + Q LS AER+ AQ+FM ++ AA +DE V+ G+PA KIK ++ V+ TL+K++L ET LE DLL +K+W+ PY G LP+L VR + ++ LPV+ +HLKRS +G +M + EET ENKR L QL+ KW RP+Y K T+ R Q+++E
Sbjct: 1 MKRIRGQQLSIAERDTFAQDFMHFMDTAAAEDERLVREGKPAFAKIKALKAVQRTLSKQDLWETLLEVDLLTGVKKWISPYEGRGTLPSLDVRKAMYAILLTLPVEKEHLKRSQLGMTIMAMKQHPEETAENKRTLAQLIEKWCRPIYNKGTDLRELSRVQEEIE 165
BLAST of mRNA_Ecto-sp13_S_contig10590.548.1 vs. uniprot
Match: A0A8K1CB40_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CB40_PYTOL) HSP 1 Score: 146 bits (369), Expect = 8.380e-34 Identity = 89/227 (39.21%), Postives = 132/227 (58.15%), Query Frame = 3
Query: 867 DAGEEVARAPNKRTKEDDDFIXXXXXXXXLLNEYKQDEPEGGDHSEAEEDNNPENFHDAPKKESAMTAVLASMK--KRKAQDLSTAEREQIAQEFMFKINQAAEDDEEAVQNGRPAIYKIKMIRVVKATLAKKELQETFLEFDLLGVLKRWLQPYSNGQLPNLTVRTDILKLIENLPVQVDHLKRSGIGKVVMGLLNCGEETTENKRRLRQLVSKWNRPVYEKETNY 1541
D+G+E+ R TK+DD FI +L EY +D+ + D ED K+E L S+K +R +LS E+EQI QE ++++++A DD ++ +PA+ +IK + L K++LQ TFL+FDLL +K+W+QP +G LPNL VRT +L ++ LPV +HLKRSG GKVVM L EET +NK R L+ +W+R V++K +Y
Sbjct: 293 DSGDEIVR-----TKDDDAFIDQDDDLEDVLGEYDEDDQKFEDERPLPEDVG------GRKEEDYFEETLKSLKTGRRAKMNLSVQEQEQIVQEVLYRMDKAHADDLASIAERKPALERIKYVDHAIRVLRKQQLQPTFLDFDLLSFIKKWIQPLEDGTLPNLGVRTKMLHMVARLPVMKEHLKRSGFGKVVMMLWKHPEETRDNKDLCRDLIERWSRAVFDKTLDY 508
BLAST of mRNA_Ecto-sp13_S_contig10590.548.1 vs. uniprot
Match: F0WGB7_9STRA (Uncharacterized protein AlNc14C90G5648 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WGB7_9STRA) HSP 1 Score: 142 bits (357), Expect = 3.440e-33 Identity = 78/225 (34.67%), Postives = 130/225 (57.78%), Query Frame = 3
Query: 867 DAGEEVARAPNKRTKEDDDFIXXXXXXXXLLNEYKQDEPEGGDHSEAEEDNNPENFHDAPKKESAMTAVLASMKKRKAQDLSTAEREQIAQEFMFKINQAAEDDEEAVQNGRPAIYKIKMIRVVKATLAKKELQETFLEFDLLGVLKRWLQPYSNGQLPNLTVRTDILKLIENLPVQVDHLKRSGIGKVVMGLLNCGEETTENKRRLRQLVSKWNRPVYEKETNY 1541
D+GEE A TKEDDDFI +L EY+Q++ + D + F + + + ++ + K +LS + E++ QE +F++++A +D+ A+ +GRPA KIK + + K+ LQ L+FDLL ++++W+QP +G LPNL +RT ++ ++ LP+ +HLKRSG GKV+M L +ET ENK R+++ +W+R V+ K +Y
Sbjct: 101 DSGEEAAP-----TKEDDDFIDREDDLADVLGEYEQEKQQFDDERPVDRVEQEAVFEEDTYFDDTLKSLKTGRRSSKM-NLSIQDMERVTQELLFQMDKAWAEDQNAISSGRPAFAKIKFVDHALQIMRKQRLQPMLLDFDLLSIIRKWIQPLGDGALPNLGMRTKMISMVHRLPIYKEHLKRSGFGKVIMTLWKHSDETPENKELCREMIDRWSRSVFNKILDY 319
BLAST of mRNA_Ecto-sp13_S_contig10590.548.1 vs. uniprot
Match: A0A6G0WK12_9STRA (TFIIS N-terminal domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WK12_9STRA) HSP 1 Score: 141 bits (355), Expect = 6.870e-33 Identity = 85/245 (34.69%), Postives = 137/245 (55.92%), Query Frame = 3
Query: 867 DAGEEVARAPNKRTKEDDDFIXXXXXXXXLLNEYKQDEPEGGDHSEAEEDNNPENFHDAPKKESAMTAVLASMKKRKAQDLSTAEREQIAQEFMFKINQAAEDDEEAVQNGRPAIYKIKMIRVVKATLAKKELQETFLEFDLLGVLKRWLQPYSNGQLPNLTVRTDILKLIENLPVQVDHLKRSGIGKVVMGLLNCGEETTENKRRLRQLVSKWNRPVYEKETNYRARRPAQDDLEAMEVPSRGG 1601
D+GEE R TK+DD FI +L+EY QD D +E + + H+ E + ++ + K + +S E E + QE ++ +++A DD+ A++ +PA+ K+K++ V K +LQ L+FD LGV+K+W+QP NG LPN+ +RT ++++ + LP+ +HLKRSG GKV+M L ET ENK RQL+ +W+R V+ K ++ +LEA + + GG
Sbjct: 102 DSGEEAVR-----TKDDDAFIDDEDDLGGVLDEYDQDNQNFDDERPDDEGDRFTSRHEDDYFEETLKSMKTGRGRSKLK-MSQQEIETLVQELLYNMDKAYNDDQVAMEEKKPALQKLKLVNSVLLLARKHQLQLPLLDFDFLGVVKKWIQPMENGLLPNIGLRTKMIEMCQTLPIDKEHLKRSGFGKVIMALWKHPHETPENKEICRQLIDRWSRSVFSKTLDF----TKLSELEAEKREANGG 336
BLAST of mRNA_Ecto-sp13_S_contig10590.548.1 vs. uniprot
Match: A0A1V9ZKU1_9STRA (TFIIS N-terminal domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZKU1_9STRA) HSP 1 Score: 143 bits (361), Expect = 1.580e-32 Identity = 86/245 (35.10%), Postives = 133/245 (54.29%), Query Frame = 3
Query: 867 DAGEEVARAPNKRTKEDDDFIXXXXXXXXLLNEYKQDEPEGGDHSEAEEDNNPENFHDAPKKESAMTAVLASMKKRKAQDLSTAEREQIAQEFMFKINQAAEDDEEAVQNGRPAIYKIKMIRVVKATLAKKELQETFLEFDLLGVLKRWLQPYSNGQLPNLTVRTDILKLIENLPVQVDHLKRSGIGKVVMGLLNCGEETTENKRRLRQLVSKWNRPVYEKETNYRARRPAQDDLEAMEVPSRGG 1601
D+GEE R TKEDD FI +LNEY D+ E D E+D P L S + + LS E E + QE ++++++A DD +A++ RPA+ K+K + + K +LQ L+FDLLG++K+W+QP +G LPNL++R+ +L + + +P+ +HLKRS GK +M L +ET ENK RQ++ +W+R V+ K +Y +LEA + + GG
Sbjct: 94 DSGEEAVR-----TKEDDAFIDNDDDLDDVLNEYGNDKQEFHDERPDEDDEPSSRRQREPDYFDETLKSLKSGRAKSKMALSQQEMESLTQELLYRMDKAHSDDVQAMEEHRPALEKLKFVDNALMMMRKVQLQPMLLDFDLLGIIKKWIQPMESGTLPNLSLRSKMLDMCQRMPIYKEHLKRSSFGKAIMALWKHPDETPENKELCRQMIDRWSRSVFSKTLDY----SKLAELEAEKREANGG 329
BLAST of mRNA_Ecto-sp13_S_contig10590.548.1 vs. uniprot
Match: A0A067C2C7_SAPPC (TFIIS N-terminal domain-containing protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067C2C7_SAPPC) HSP 1 Score: 138 bits (348), Expect = 5.290e-32 Identity = 85/234 (36.32%), Postives = 132/234 (56.41%), Query Frame = 3
Query: 867 DAGEEVARAPNKRTKEDDDFIXXXXXXXXLLNEYKQDEPEGGDHS---EAEEDNNPE------NFHDAPKKESAMTAVLASMKKRKAQDLSTAEREQIAQEFMFKINQAAEDDEEAVQNGRPAIYKIKMIRVVKATLAKKELQETFLEFDLLGVLKRWLQPYSNGQLPNLTVRTDILKLIENLPVQVDHLKRSGIGKVVMGLLNCGEETTENKRRLRQLVSKWNRPVYEKETNY 1541
D+G+EV KR+K DD FI +L+EY D+ E D + +ED PE +F D K L S + + LS + E I QE ++++++A DD +A+ RPA+ K+K + + K +LQ L+FDLLG++K+W+QP NG LP+L++R+ +L + + +P+ +HLKRSG GKVVM L +ET ENK R ++ +W+R V+ K +Y
Sbjct: 93 DSGDEV-----KRSKADDAFIDNDDDLDDVLDEYGNDKQEFHDERPDMDDDEDEAPERQQRELDFFDETMK------GLKSGRAKSKMSLSQQDMENITQELLYRMDKAYSDDVQAIDEHRPALEKLKFVDNALTMMRKVQLQPMLLDFDLLGIIKKWIQPLDNGALPSLSLRSKMLDMCQRMPIYKEHLKRSGFGKVVMSLWKHPDETPENKELCRLMIDRWSRSVFSKTLDY 315
BLAST of mRNA_Ecto-sp13_S_contig10590.548.1 vs. uniprot
Match: G5AGW9_PHYSP (TFIIS N-terminal domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=G5AGW9_PHYSP) HSP 1 Score: 138 bits (347), Expect = 5.450e-32 Identity = 96/292 (32.88%), Postives = 149/292 (51.03%), Query Frame = 3
Query: 867 DAGEEVARAPNKRTKEDDDFIXXXXXXXXLLNEYKQDEPEGGDHSEAEEDNNPENFHDAPKKESAMTAVLASMKKRKAQ---DLSTAEREQIAQEFMFKINQAAEDDEEAVQNGRPAIYKIKMIRVVKATLAKKELQETFLEFDLLGVLKRWLQPYSNGQLPNLTVRTDILKLIENLPVQVDHLKRSGIGKVVMGLLNCGEETTENKRRLRQLVSKWNRPVYEKETNYRARRPAQDDLEAMEVPSRGGGGAAGSGVRRRVVHGSMRRDGASKDEAVGNILNARARGLDPTKA 1733
D+GEE TKEDDDFI +L EY D + D ++ PE +K+ L S+K +++ LS E EQI QE ++++++A DD ++ RPA+ KIK + L K + Q L+FDLL ++K+W+QP +G LPN+ +RT +L+++ +PV +HLKRSG+GKVVM L+ +ET ENK R LV +W+R V+ K ++ + + E+ R R R ++ A + N+ N R+ G + KA
Sbjct: 76 DSGEEAVA-----TKEDDDFIDGDDDLADVLGEYDDDRQQFDDERPLGDE--PEQTQQ--QKDDFFDRTLKSLKTGRSRTKLSLSPQEMEQITQEVLYRMDKAYADDLASIAERRPALEKIKFVDSALHVLRKLQFQPMLLDFDLLTIVKKWIQPLEDGSLPNVGLRTKMLEMVSKMPVFKEHLKRSGLGKVVMLLMKHPQETPENKELCRSLVERWSRAVFNKTLDFSKLAELEAEKAENEMYRR----------RERARKHKKAKNKAHAGDRGANVFNGRSGGNNDVKA 348 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10590.548.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10590.548.1 >prot_Ecto-sp13_S_contig10590.548.1 ID=prot_Ecto-sp13_S_contig10590.548.1|Name=mRNA_Ecto-sp13_S_contig10590.548.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=568bp MDDVFGSDSSANEFDPAEEADNNNNEDAPSGGAGALDSDGDDDEGMTRNKback to top mRNA from alignment at Ecto-sp13_S_contig10590:545..5767+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10590.548.1 ID=mRNA_Ecto-sp13_S_contig10590.548.1|Name=mRNA_Ecto-sp13_S_contig10590.548.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5223bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10590:545..5767+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10590:545..5767+ >mRNA_Ecto-sp13_S_contig10590.548.1 ID=mRNA_Ecto-sp13_S_contig10590.548.1|Name=mRNA_Ecto-sp13_S_contig10590.548.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1704bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10590:545..5767+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |