mRNA_Ecto-sp13_S_contig10590.548.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig10590.548.1
Unique NamemRNA_Ecto-sp13_S_contig10590.548.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig10590.548.1 vs. uniprot
Match: D8LRK3_ECTSI (TFIIS N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRK3_ECTSI)

HSP 1 Score: 664 bits (1713), Expect = 2.200e-232
Identity = 490/570 (85.96%), Postives = 495/570 (86.84%), Query Frame = 3
Query:   30 MDDVFGSDSSANEFDPAEEADNNNNEDAPSGGAGALDSDGDDDEGMTRNKPGASPTDAGAAXXXXXXXXXXXXXXXAFPADADAEKLAMDADVFGSDSEDEVAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGKTLGKTGGGRLSKGGSSGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGDVEEGAEGGSSKKTTXXXXXXXXXXXXXXXTSVESSTLQDLGLESSADEAAQDXXXXXXXLSDAE--VEHQDEEDEGIGGDAGEEVARAPNKRTKEDDDFIXXXXXXXXLLNEYKQDEPEGGDHSEAEEDNNPENFHDAPKKESAMTAVLASMKKRKAQDLSTAEREQIAQEFMFKINQAAEDDEEAVQNGRPAIYKIKMIRVVKATLAKKELQETFLEFDLLGVLKRWLQPYSNGQLPNLTVRTDILKLIENLPVQVDHLKRSGIGKVVMGLLNCGEETTENKRRLRQLVSKWNRPVYEKETNYRARRPAQDDLEAMEVPSRGGGGAAGSGVRRRVVHGSMRRDGASKDEAVGNILNARARGLDPTKA 1733
            MDDVFGSDSSANEFDPAEEADNNNNEDAPSGGAGALDSDGDDDEGMT NKPGASPTD GAA XXXXXXXXXXXXXXAFPADADAEKLAMDADVFGSDSE+EV  XXXXXXXXXX                   GGKTLGKTGG RLSKG SSGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGDVEEG EGGSSKKTT XXXXXXXXXXXXXX      TLQDLGLESSADEAAQ XXXXXXX       VEH+DEEDEG+GGD GEEV RAPNKRT+E     XXXXXXXX              HSEAEEDNNPENFHDAPKKESAMTAVLASMKKRKAQDLSTAEREQIAQEFMFKINQAAEDDEEAVQNGRPAIYKIKMIRVVKATLAKKELQETFLEFDLLGVLKRWLQPYSNGQLPNLTVRTDILKLIENLPVQVDHLKRSGIGKVVMGLLNC EETTENKRRLRQLVSKWNRPVYEKETNYRARRPAQDDLEAMEVP+RGG           VVHGSMRRDGASKDEAVGNILNARARGLDPTKA
Sbjct:    1 MDDVFGSDSSANEFDPAEEADNNNNEDAPSGGAGALDSDGDDDEGMTSNKPGASPTDVGAALXXXXXXXXXXXXXXAFPADADAEKLAMDADVFGSDSEEEVXXXXXXXXXXXXTAVADVDPFEESDDEEGGSGGKTLGKTGGDRLSKGDSSGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGDVEEGVEGGSSKKTTKXXXXXXXXXXXXXXXXXXXXTLQDLGLESSADEAAQXXXXXXXXXXXXXXXVEHEDEEDEGLGGDGGEEVVRAPNKRTREXXXXXXXXXXXXXXXXXXXXXXXXXXXHSEAEEDNNPENFHDAPKKESAMTAVLASMKKRKAQDLSTAEREQIAQEFMFKINQAAEDDEEAVQNGRPAIYKIKMIRVVKATLAKKELQETFLEFDLLGVLKRWLQPYSNGQLPNLTVRTDILKLIENLPVQVDHLKRSGIGKVVMGLLNCREETTENKRRLRQLVSKWNRPVYEKETNYRARRPAQDDLEAMEVPTRGGXXXXXXXXXXXVVHGSMRRDGASKDEAVGNILNARARGLDPTKA 570          
BLAST of mRNA_Ecto-sp13_S_contig10590.548.1 vs. uniprot
Match: A0A2D4BW91_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BW91_PYTIN)

HSP 1 Score: 153 bits (387), Expect = 1.400e-35
Identity = 93/227 (40.97%), Postives = 131/227 (57.71%), Query Frame = 3
Query:  867 DAGEEVARAPNKRTKEDDDFIXXXXXXXXLLNEYKQDEPEGGDHSEAEEDNNPENFHDAPKKESAMTAVLASMK--KRKAQDLSTAEREQIAQEFMFKINQAAEDDEEAVQNGRPAIYKIKMIRVVKATLAKKELQETFLEFDLLGVLKRWLQPYSNGQLPNLTVRTDILKLIENLPVQVDHLKRSGIGKVVMGLLNCGEETTENKRRLRQLVSKWNRPVYEKETNY 1541
            D+G+EV R     T+EDD+FI        +L EY Q++ +  D    E+D          K E      L S+K  +R    LS  E+EQI QE ++++++A  DD  ++   RPA+ +IK +      L K +LQ TFL+FDLL  +K+W+QP  +G LPNL VRT +L ++  LPV  +HLKRSG GKVVM L    EET ENK   R L+ +W+R V+EK  +Y
Sbjct:  654 DSGDEVVR-----TREDDEFIDQEDDLADVLGEYDQEDQKFDDERPLEDDPRQPG---RTKDEDYFEQTLKSLKTGRRSKMQLSVQEQEQIVQEVLYRLDKAHADDLASIAERRPALERIKYVDEAVRVLRKHQLQPTFLDFDLLSFIKKWIQPLDDGTLPNLGVRTKLLHMVARLPVMKEHLKRSGFGKVVMMLWKHPEETRENKELCRDLIERWSRAVFEKTLDY 872          
BLAST of mRNA_Ecto-sp13_S_contig10590.548.1 vs. uniprot
Match: A0A485LKM7_9STRA (Aste57867_22366 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LKM7_9STRA)

HSP 1 Score: 148 bits (373), Expect = 1.910e-35
Identity = 95/269 (35.32%), Postives = 147/269 (54.65%), Query Frame = 3
Query:  867 DAGEEVARAPNKRTKEDDDFIXXXXXXXXLLNEYKQDEPEGGDHSEAEEDNNPENFHDAPKKESAMTAVLASMKKRKAQD---LSTAEREQIAQEFMFKINQAAEDDEEAVQNGRPAIYKIKMIRVVKATLAKKELQETFLEFDLLGVLKRWLQPYSNGQLPNLTVRTDILKLIENLPVQVDHLKRSGIGKVVMGLLNCGEETTENKRRLRQLVSKWNRPVYEKETNYRARRPAQDDLEAMEVPSR-GGGGAAGSGVRRRVVHGSMRRD 1661
            D+GEEV     +RTK+D+ FI        +L+EY QD     D    EE+   + F    + E      + SMK  + +    +S  E E + QE ++ +++A  DD  A+   RPA+ K+K++  V   + K +LQ+  L+FDLLGV+K+W+QP  NG LPNL +RT ++++ + LP+  +HLKRSG GKV+M L    +E+ ENK   RQL+ +W+R V+ K  ++         L  +E   R   GG  G   RR+    +M R+
Sbjct:   90 DSGEEV-----ERTKDDEAFIDDEDDLGGVLDEYNQDNQTFDDERPEEEE---DRFTRRREAEDFFDETMKSMKSGRGRSKLKMSQQEIETLTQEVLYNMDKAYNDDLVAMDERRPALEKLKLVDKVLLLMRKVQLQQPLLDFDLLGVIKKWIQPMENGSLPNLGLRTKMIEICQRLPIDKEHLKRSGFGKVIMTLWKHPDESVENKEICRQLIDRWSRSVFSKTLDF-------SKLGELEAEKREANGGMRGPAERRQQASRAMERN 343          
BLAST of mRNA_Ecto-sp13_S_contig10590.548.1 vs. uniprot
Match: A0A835YPY7_9STRA (TFIIS N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPY7_9STRA)

HSP 1 Score: 140 bits (353), Expect = 3.120e-34
Identity = 75/165 (45.45%), Postives = 108/165 (65.45%), Query Frame = 3
Query: 1083 MKKRKAQDLSTAEREQIAQEFMFKINQAAEDDEEAVQNGRPAIYKIKMIRVVKATLAKKELQETFLEFDLLGVLKRWLQPYSN-GQLPNLTVRTDILKLIENLPVQVDHLKRSGIGKVVMGLLNCGEETTENKRRLRQLVSKWNRPVYEKETNYRARRPAQDDLE 1574
            MK+ + Q LS AER+  AQ+FM  ++ AA +DE  V+ G+PA  KIK ++ V+ TL+K++L ET LE DLL  +K+W+ PY   G LP+L VR  +  ++  LPV+ +HLKRS +G  +M +    EET ENKR L QL+ KW RP+Y K T+ R     Q+++E
Sbjct:    1 MKRIRGQQLSIAERDTFAQDFMHFMDTAAAEDERLVREGKPAFAKIKALKAVQRTLSKQDLWETLLEVDLLTGVKKWISPYEGRGTLPSLDVRKAMYAILLTLPVEKEHLKRSQLGMTIMAMKQHPEETAENKRTLAQLIEKWCRPIYNKGTDLRELSRVQEEIE 165          
BLAST of mRNA_Ecto-sp13_S_contig10590.548.1 vs. uniprot
Match: A0A8K1CB40_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CB40_PYTOL)

HSP 1 Score: 146 bits (369), Expect = 8.380e-34
Identity = 89/227 (39.21%), Postives = 132/227 (58.15%), Query Frame = 3
Query:  867 DAGEEVARAPNKRTKEDDDFIXXXXXXXXLLNEYKQDEPEGGDHSEAEEDNNPENFHDAPKKESAMTAVLASMK--KRKAQDLSTAEREQIAQEFMFKINQAAEDDEEAVQNGRPAIYKIKMIRVVKATLAKKELQETFLEFDLLGVLKRWLQPYSNGQLPNLTVRTDILKLIENLPVQVDHLKRSGIGKVVMGLLNCGEETTENKRRLRQLVSKWNRPVYEKETNY 1541
            D+G+E+ R     TK+DD FI        +L EY +D+ +  D     ED          K+E      L S+K  +R   +LS  E+EQI QE ++++++A  DD  ++   +PA+ +IK +      L K++LQ TFL+FDLL  +K+W+QP  +G LPNL VRT +L ++  LPV  +HLKRSG GKVVM L    EET +NK   R L+ +W+R V++K  +Y
Sbjct:  293 DSGDEIVR-----TKDDDAFIDQDDDLEDVLGEYDEDDQKFEDERPLPEDVG------GRKEEDYFEETLKSLKTGRRAKMNLSVQEQEQIVQEVLYRMDKAHADDLASIAERKPALERIKYVDHAIRVLRKQQLQPTFLDFDLLSFIKKWIQPLEDGTLPNLGVRTKMLHMVARLPVMKEHLKRSGFGKVVMMLWKHPEETRDNKDLCRDLIERWSRAVFDKTLDY 508          
BLAST of mRNA_Ecto-sp13_S_contig10590.548.1 vs. uniprot
Match: F0WGB7_9STRA (Uncharacterized protein AlNc14C90G5648 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WGB7_9STRA)

HSP 1 Score: 142 bits (357), Expect = 3.440e-33
Identity = 78/225 (34.67%), Postives = 130/225 (57.78%), Query Frame = 3
Query:  867 DAGEEVARAPNKRTKEDDDFIXXXXXXXXLLNEYKQDEPEGGDHSEAEEDNNPENFHDAPKKESAMTAVLASMKKRKAQDLSTAEREQIAQEFMFKINQAAEDDEEAVQNGRPAIYKIKMIRVVKATLAKKELQETFLEFDLLGVLKRWLQPYSNGQLPNLTVRTDILKLIENLPVQVDHLKRSGIGKVVMGLLNCGEETTENKRRLRQLVSKWNRPVYEKETNY 1541
            D+GEE A      TKEDDDFI        +L EY+Q++ +  D    +       F +    +  + ++    +  K  +LS  + E++ QE +F++++A  +D+ A+ +GRPA  KIK +      + K+ LQ   L+FDLL ++++W+QP  +G LPNL +RT ++ ++  LP+  +HLKRSG GKV+M L    +ET ENK   R+++ +W+R V+ K  +Y
Sbjct:  101 DSGEEAAP-----TKEDDDFIDREDDLADVLGEYEQEKQQFDDERPVDRVEQEAVFEEDTYFDDTLKSLKTGRRSSKM-NLSIQDMERVTQELLFQMDKAWAEDQNAISSGRPAFAKIKFVDHALQIMRKQRLQPMLLDFDLLSIIRKWIQPLGDGALPNLGMRTKMISMVHRLPIYKEHLKRSGFGKVIMTLWKHSDETPENKELCREMIDRWSRSVFNKILDY 319          
BLAST of mRNA_Ecto-sp13_S_contig10590.548.1 vs. uniprot
Match: A0A6G0WK12_9STRA (TFIIS N-terminal domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WK12_9STRA)

HSP 1 Score: 141 bits (355), Expect = 6.870e-33
Identity = 85/245 (34.69%), Postives = 137/245 (55.92%), Query Frame = 3
Query:  867 DAGEEVARAPNKRTKEDDDFIXXXXXXXXLLNEYKQDEPEGGDHSEAEEDNNPENFHDAPKKESAMTAVLASMKKRKAQDLSTAEREQIAQEFMFKINQAAEDDEEAVQNGRPAIYKIKMIRVVKATLAKKELQETFLEFDLLGVLKRWLQPYSNGQLPNLTVRTDILKLIENLPVQVDHLKRSGIGKVVMGLLNCGEETTENKRRLRQLVSKWNRPVYEKETNYRARRPAQDDLEAMEVPSRGG 1601
            D+GEE  R     TK+DD FI        +L+EY QD     D    +E +   + H+    E  + ++     + K + +S  E E + QE ++ +++A  DD+ A++  +PA+ K+K++  V     K +LQ   L+FD LGV+K+W+QP  NG LPN+ +RT ++++ + LP+  +HLKRSG GKV+M L     ET ENK   RQL+ +W+R V+ K  ++        +LEA +  + GG
Sbjct:  102 DSGEEAVR-----TKDDDAFIDDEDDLGGVLDEYDQDNQNFDDERPDDEGDRFTSRHEDDYFEETLKSMKTGRGRSKLK-MSQQEIETLVQELLYNMDKAYNDDQVAMEEKKPALQKLKLVNSVLLLARKHQLQLPLLDFDFLGVVKKWIQPMENGLLPNIGLRTKMIEMCQTLPIDKEHLKRSGFGKVIMALWKHPHETPENKEICRQLIDRWSRSVFSKTLDF----TKLSELEAEKREANGG 336          
BLAST of mRNA_Ecto-sp13_S_contig10590.548.1 vs. uniprot
Match: A0A1V9ZKU1_9STRA (TFIIS N-terminal domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZKU1_9STRA)

HSP 1 Score: 143 bits (361), Expect = 1.580e-32
Identity = 86/245 (35.10%), Postives = 133/245 (54.29%), Query Frame = 3
Query:  867 DAGEEVARAPNKRTKEDDDFIXXXXXXXXLLNEYKQDEPEGGDHSEAEEDNNPENFHDAPKKESAMTAVLASMKKRKAQDLSTAEREQIAQEFMFKINQAAEDDEEAVQNGRPAIYKIKMIRVVKATLAKKELQETFLEFDLLGVLKRWLQPYSNGQLPNLTVRTDILKLIENLPVQVDHLKRSGIGKVVMGLLNCGEETTENKRRLRQLVSKWNRPVYEKETNYRARRPAQDDLEAMEVPSRGG 1601
            D+GEE  R     TKEDD FI        +LNEY  D+ E  D    E+D         P         L S + +    LS  E E + QE ++++++A  DD +A++  RPA+ K+K +      + K +LQ   L+FDLLG++K+W+QP  +G LPNL++R+ +L + + +P+  +HLKRS  GK +M L    +ET ENK   RQ++ +W+R V+ K  +Y        +LEA +  + GG
Sbjct:   94 DSGEEAVR-----TKEDDAFIDNDDDLDDVLNEYGNDKQEFHDERPDEDDEPSSRRQREPDYFDETLKSLKSGRAKSKMALSQQEMESLTQELLYRMDKAHSDDVQAMEEHRPALEKLKFVDNALMMMRKVQLQPMLLDFDLLGIIKKWIQPMESGTLPNLSLRSKMLDMCQRMPIYKEHLKRSSFGKAIMALWKHPDETPENKELCRQMIDRWSRSVFSKTLDY----SKLAELEAEKREANGG 329          
BLAST of mRNA_Ecto-sp13_S_contig10590.548.1 vs. uniprot
Match: A0A067C2C7_SAPPC (TFIIS N-terminal domain-containing protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067C2C7_SAPPC)

HSP 1 Score: 138 bits (348), Expect = 5.290e-32
Identity = 85/234 (36.32%), Postives = 132/234 (56.41%), Query Frame = 3
Query:  867 DAGEEVARAPNKRTKEDDDFIXXXXXXXXLLNEYKQDEPEGGDHS---EAEEDNNPE------NFHDAPKKESAMTAVLASMKKRKAQDLSTAEREQIAQEFMFKINQAAEDDEEAVQNGRPAIYKIKMIRVVKATLAKKELQETFLEFDLLGVLKRWLQPYSNGQLPNLTVRTDILKLIENLPVQVDHLKRSGIGKVVMGLLNCGEETTENKRRLRQLVSKWNRPVYEKETNY 1541
            D+G+EV     KR+K DD FI        +L+EY  D+ E  D     + +ED  PE      +F D   K       L S + +    LS  + E I QE ++++++A  DD +A+   RPA+ K+K +      + K +LQ   L+FDLLG++K+W+QP  NG LP+L++R+ +L + + +P+  +HLKRSG GKVVM L    +ET ENK   R ++ +W+R V+ K  +Y
Sbjct:   93 DSGDEV-----KRSKADDAFIDNDDDLDDVLDEYGNDKQEFHDERPDMDDDEDEAPERQQRELDFFDETMK------GLKSGRAKSKMSLSQQDMENITQELLYRMDKAYSDDVQAIDEHRPALEKLKFVDNALTMMRKVQLQPMLLDFDLLGIIKKWIQPLDNGALPSLSLRSKMLDMCQRMPIYKEHLKRSGFGKVVMSLWKHPDETPENKELCRLMIDRWSRSVFSKTLDY 315          
BLAST of mRNA_Ecto-sp13_S_contig10590.548.1 vs. uniprot
Match: G5AGW9_PHYSP (TFIIS N-terminal domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=G5AGW9_PHYSP)

HSP 1 Score: 138 bits (347), Expect = 5.450e-32
Identity = 96/292 (32.88%), Postives = 149/292 (51.03%), Query Frame = 3
Query:  867 DAGEEVARAPNKRTKEDDDFIXXXXXXXXLLNEYKQDEPEGGDHSEAEEDNNPENFHDAPKKESAMTAVLASMKKRKAQ---DLSTAEREQIAQEFMFKINQAAEDDEEAVQNGRPAIYKIKMIRVVKATLAKKELQETFLEFDLLGVLKRWLQPYSNGQLPNLTVRTDILKLIENLPVQVDHLKRSGIGKVVMGLLNCGEETTENKRRLRQLVSKWNRPVYEKETNYRARRPAQDDLEAMEVPSRGGGGAAGSGVRRRVVHGSMRRDGASKDEAVGNILNARARGLDPTKA 1733
            D+GEE        TKEDDDFI        +L EY  D  +  D     ++  PE      +K+      L S+K  +++    LS  E EQI QE ++++++A  DD  ++   RPA+ KIK +      L K + Q   L+FDLL ++K+W+QP  +G LPN+ +RT +L+++  +PV  +HLKRSG+GKVVM L+   +ET ENK   R LV +W+R V+ K  ++      + +    E+  R          R R       ++ A   +   N+ N R+ G +  KA
Sbjct:   76 DSGEEAVA-----TKEDDDFIDGDDDLADVLGEYDDDRQQFDDERPLGDE--PEQTQQ--QKDDFFDRTLKSLKTGRSRTKLSLSPQEMEQITQEVLYRMDKAYADDLASIAERRPALEKIKFVDSALHVLRKLQFQPMLLDFDLLTIVKKWIQPLEDGSLPNVGLRTKMLEMVSKMPVFKEHLKRSGLGKVVMLLMKHPQETPENKELCRSLVERWSRAVFNKTLDFSKLAELEAEKAENEMYRR----------RERARKHKKAKNKAHAGDRGANVFNGRSGGNNDVKA 348          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10590.548.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRK3_ECTSI2.200e-23285.96TFIIS N-terminal domain-containing protein n=2 Tax... [more]
A0A2D4BW91_PYTIN1.400e-3540.97Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]
A0A485LKM7_9STRA1.910e-3535.32Aste57867_22366 protein n=1 Tax=Aphanomyces stella... [more]
A0A835YPY7_9STRA3.120e-3445.45TFIIS N-terminal domain-containing protein n=1 Tax... [more]
A0A8K1CB40_PYTOL8.380e-3439.21Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
F0WGB7_9STRA3.440e-3334.67Uncharacterized protein AlNc14C90G5648 n=1 Tax=Alb... [more]
A0A6G0WK12_9STRA6.870e-3334.69TFIIS N-terminal domain-containing protein n=1 Tax... [more]
A0A1V9ZKU1_9STRA1.580e-3235.10TFIIS N-terminal domain-containing protein n=1 Tax... [more]
A0A067C2C7_SAPPC5.290e-3236.32TFIIS N-terminal domain-containing protein n=3 Tax... [more]
G5AGW9_PHYSP5.450e-3232.88TFIIS N-terminal domain-containing protein n=11 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10590contigEcto-sp13_S_contig10590:545..5767 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score669.8
Seed ortholog evalue1.1e-189
Seed eggNOG ortholog2880.D8LRK3
Preferred nameIWS1
Model size1733
KEGG koko:K17498
Hectar predicted targeting categoryother localisation
GOsGO:0000414,GO:0000988,GO:0000989,GO:0000990,GO:0000991,GO:0001076,GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006325,GO:0006342,GO:0006348,GO:0006351,GO:0006354,GO:0006355,GO:0006357,GO:0006366,GO:0006368,GO:0006403,GO:0006405,GO:0006406,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006996,GO:0007154,GO:0007165,GO:0008023,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009719,GO:0009725,GO:0009741,GO:0009742,GO:0009755,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0010793,GO:0014070,GO:0015031,GO:0015833,GO:0015931,GO:0016043,GO:0016070,GO:0016458,GO:0016973,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0023052,GO:0030702,GO:0031056,GO:0031060,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031399,GO:0031503,GO:0031974,GO:0031981,GO:0032239,GO:0032268,GO:0032386,GO:0032774,GO:0032784,GO:0032870,GO:0032879,GO:0032880,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033157,GO:0033993,GO:0034243,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0034728,GO:0035065,GO:0040029,GO:0042221,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043401,GO:0043933,GO:0043954,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045184,GO:0045814,GO:0045892,GO:0045934,GO:0046483,GO:0046822,GO:0046825,GO:0046831,GO:0046907,GO:0048519,GO:0048523,GO:0048545,GO:0050657,GO:0050658,GO:0050684,GO:0050789,GO:0050794,GO:0050896,GO:0051028,GO:0051049,GO:0051128,GO:0051168,GO:0051169,GO:0051171,GO:0051172,GO:0051179,GO:0051223,GO:0051234,GO:0051236,GO:0051246,GO:0051252,GO:0051253,GO:0051276,GO:0051641,GO:0051649,GO:0051716,GO:0060255,GO:0060303,GO:0060341,GO:0065007,GO:0065008,GO:0070013,GO:0070201,GO:0070727,GO:0070827,GO:0070887,GO:0071166,GO:0071310,GO:0071367,GO:0071383,GO:0071396,GO:0071407,GO:0071426,GO:0071427,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071824,GO:0071840,GO:0080090,GO:0090087,GO:0090239,GO:0090304,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901576,GO:1901700,GO:1901701,GO:1901983,GO:1902275,GO:1902679,GO:1903311,GO:1903506,GO:1903507,GO:1903827,GO:2000112,GO:2000113,GO:2000197,GO:2000756,GO:2001141,GO:2001253
Exons6
EggNOG free text desc.regulation of histone H3-K36 trimethylation
EggNOG OGsCOG5139@1,KOG1793@2759
Ec32 ortholog descriptionTranscription factor IIS, N-terminal
Ec32 orthologEc-12_000120.1
Cds size1704
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03021
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10590.548.1prot_Ecto-sp13_S_contig10590.548.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig10590 574..5767 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462540.298792-UTR-Ecto-sp13_S_contig10590:544..5731681462540.298792-UTR-Ecto-sp13_S_contig10590:544..573Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig10590 545..573 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462540.3091593-CDS-Ecto-sp13_S_contig10590:573..14821681462540.3091593-CDS-Ecto-sp13_S_contig10590:573..1482Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10590 574..1482 +
1681462540.317275-CDS-Ecto-sp13_S_contig10590:2421..25531681462540.317275-CDS-Ecto-sp13_S_contig10590:2421..2553Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10590 2422..2553 +
1681462540.3252368-CDS-Ecto-sp13_S_contig10590:2867..30291681462540.3252368-CDS-Ecto-sp13_S_contig10590:2867..3029Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10590 2868..3029 +
1681462540.333081-CDS-Ecto-sp13_S_contig10590:3737..38241681462540.333081-CDS-Ecto-sp13_S_contig10590:3737..3824Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10590 3738..3824 +
1681462540.342877-CDS-Ecto-sp13_S_contig10590:4608..47491681462540.342877-CDS-Ecto-sp13_S_contig10590:4608..4749Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10590 4609..4749 +
1681462540.3506854-CDS-Ecto-sp13_S_contig10590:5494..57671681462540.3506854-CDS-Ecto-sp13_S_contig10590:5494..5767Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10590 5495..5767 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig10590.548.1

>prot_Ecto-sp13_S_contig10590.548.1 ID=prot_Ecto-sp13_S_contig10590.548.1|Name=mRNA_Ecto-sp13_S_contig10590.548.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=568bp
MDDVFGSDSSANEFDPAEEADNNNNEDAPSGGAGALDSDGDDDEGMTRNK
PGASPTDAGAASGGTGLSDSEDDNDEAFPADADAEKLAMDADVFGSDSED
EVAPPPGGGAKNDDTAAADVDPFEESDDEEGGSGGKTLGKTGGGRLSKGG
SSGKGKGKGKKRKADAEGSSKSKRKKGMDGEGEGDNPTKKKKKKKKKKKD
GDVEEGAEGGSSKKTTKKKKGKKKKSKKAKTTSVESSTLQDLGLESSADE
AAQDQDDDDDDLSDAEVEHQDEEDEGIGGDAGEEVARAPNKRTKEDDDFI
DDADDNADLLNEYKQDEPEGGDHSEAEEDNNPENFHDAPKKESAMTAVLA
SMKKRKAQDLSTAEREQIAQEFMFKINQAAEDDEEAVQNGRPAIYKIKMI
RVVKATLAKKELQETFLEFDLLGVLKRWLQPYSNGQLPNLTVRTDILKLI
ENLPVQVDHLKRSGIGKVVMGLLNCGEETTENKRRLRQLVSKWNRPVYEK
ETNYRARRPAQDDLEAMEVPSRGGGGAAGSGVRRRVVHGSMRRDGASKDE
AVGNILNARARGLDPTKA
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mRNA from alignment at Ecto-sp13_S_contig10590:545..5767+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig10590.548.1 ID=mRNA_Ecto-sp13_S_contig10590.548.1|Name=mRNA_Ecto-sp13_S_contig10590.548.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5223bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10590:545..5767+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGCGTGCTGGGGCTTATTCAGCGCACACCATGGACGATGTGTTTGGGTCG GACTCCTCCGCCAACGAGTTTGACCCCGCAGAAGAAGCCGACAATAACAA CAACGAGGATGCGCCCAGCGGGGGTGCTGGCGCTCTGGACTCCGATGGCG ATGACGATGAGGGTATGACCAGAAACAAGCCGGGCGCGTCGCCCACGGAC GCGGGAGCCGCCTCGGGAGGGACAGGCCTTAGTGACAGCGAGGACGATAA TGACGAGGCCTTCCCGGCGGATGCCGATGCAGAGAAGCTGGCAATGGATG CCGATGTGTTCGGTTCGGACAGCGAGGACGAGGTCGCGCCGCCGCCGGGG GGAGGAGCCAAGAACGATGACACGGCGGCGGCAGACGTCGATCCTTTCGA GGAAAGCGACGACGAGGAGGGTGGGTCAGGGGGCAAAACCCTCGGCAAGA CCGGAGGCGGCCGGCTGAGCAAGGGGGGTAGCTCCGGTAAAGGTAAAGGA AAGGGCAAGAAGCGCAAGGCGGATGCCGAGGGTTCCAGCAAGTCGAAGCG CAAGAAGGGGATGGACGGGGAAGGGGAAGGGGACAACCCCACAAAGAAGA AGAAGAAGAAGAAGAAGAAGAAGAAGGACGGCGACGTCGAGGAAGGGGCG GAGGGTGGCAGTAGTAAGAAGACGACCAAGAAGAAGAAGGGCAAGAAAAA GAAGTCCAAGAAGGCCAAGACGACAAGCGTCGAGAGCTCGACCCTGCAAG ACCTCGGGCTGGAGTCCTCGGCGGACGAAGCGGCACAAGACCAAGACGAT GACGATGACGACTTGAGCGACGCCGAGGTAGAGCACCAAGACGAGGAGGA TGAGGGGATAGGTGGCGATGCTGGTGAGGAGGTGGCGAGGGCACCGAACA AGCGGACGAAGGAGGACGATGATTTTATCGACGACGCGGTGGGTCCGGTA ACTAAACTACGATTGCTGTATGTGTGAAGCATTCATATCTATATGTGCCC TCCTCTCCCGTAGTTTGTGGCACCAGATACCGCATCATTTTTCGTACAAA ATGTTGTTGCCACAACGATAGTCTGGGTTCGATTCACGCGTCGTTGCAGA CAATATCGCGGTTGGGAGACGAAGCTACTGGTTAGCTAGTTCGGCTGTTT AGAAGGGTGTTCAGAAATGGTTTCCTGTGCTACGAGTAGCCTTAATCGTG TTCGGCAATTTCTCGACAAGTGCATACCGTTGGAGAAAAGGGAGGTATTT AGAAGCCGGTGGTTTCTGTTGTACATGTAGGATTCACACAAGGGGATGGG ATTGTGTTTCTGCTTTGCAGCCACAGGTCATACATCAATCTTTGGCCGCC CTGCTGGCAATGTCCGCATGAAACTTTGCGCTAATTCGGGTCGTTAACAA CACTCAGTAAGAGCCAAGCAGCTGGAGCATCGCAAAGTAGCTGTTTCTTA GCGCGGTTGTTGCGTTGGAATGACGACCTCGCCGGCGGATGGTGTGATGT CATGTTGGGATGATCCCAACTGGGGCACGGTACGGAAGCCTGCCGGCAAG GCGTGTCGTGGATATGGTAAAGGCGATTCGGCGTAACCGCGCCAGGTGGA AGTTTTTGTTGGATGTGCATTTTGTCTGATCTTTCCACGCACAGCCGCTC CAGCCCGGGGGTGACACCAGATACAAACATGCAGCAGGGGTGGATGCCTC GCAGACCCTAGATACACCCACCATGTAAGCCACACAATGATCCTCTATCC CACGGTACCAAAACCCATGGAAACTCGCCCCACCATCCGTTTTGGCGTGG CTACCAATATATCTGGTCACGTGACACGGTTTTCTTCAGGCTTGAATCTA ACGGAACTCCCCCCCCCGTGTTCTTAGGACGATAACGCAGACCTGCTCAA CGAGTACAAGCAGGACGAGCCGGAAGGAGGAGACCACAGCGAGGCGGAGG AGGACAACAACCCAGAGAACTTTCACGATGCTCCTAAGAAGGAGAGCGCC ATGACCGCGGTGAGTTGAGAGTACTATGCATAGCACCGTGCAGAAGCAGC AGCAGTTGCAGCAGCGGCACGCCTGCTGTGGTCGTTGAAAGCGTGTGAAA CGATGACGGGGATGTGACTTGCACGGATAAAGGCAAGCCTTGATGGCGAT TCGCTTGTAAAGAGTGTGCCAGCATCGACACAGAATGCAAAAGTATGTGG TGGACACATGCACAGGCACAAAGCTTGTACGGTCGCCCGCTGTGCCCTTG TCTCATGCCCATACCATTCCGACACCGTGGGCTTCATGGATGCTACGACT ATGACTTCCGACTTGGCCCCAAGGTCCTGGCATCCATGAAGAAGCGTAAG GCTCAGGACCTGAGCACGGCGGAGCGCGAGCAGATCGCCCAGGAGTTCAT GTTCAAGATCAACCAGGCGGCGGAAGACGACGAGGAGGCAGTGCAGAACG GACGACCGGCGATCTACAAGATCAAGATGATCAGGGTGTGACTGACTCGC TAGAGTACCGCTTTGTTTCTGCGGCTGCTGTAGGCTTGGTTGTTCTGTTC TGCGTCGCGATACTAGCTAGCTCGAGCTCGGGGATTTTTAAGGATAGATT GGCTGCCTGCCTCTGCTGCTTCGAGATCATGTACTGCCCATTCGGGTCGC AAAGGCGTTATGCCAACGCCCCCGTCTGGTGCGATTTAATGGCCGAGGTA CCAAGTAAACTTTGTTTCCAGGGCAATCACTATTTTTAATCATGCCCTTG GTACTAGGTGTTCCGATGCCTCGAGTTTTGGTTGCCGGGCATTTTTATTG TTTCCGCGTGACAGATGGTACTTTTTTGGTGTCAACAACATACGAGCTGT CCCTCGGGGTGAAGCCTGTCCTTCAAAGGGCGAGCCCAACACCTCACGGC CCCTCGCGCCTTTCGCAATTCCCAGTTCCTACTGGCCGTCGCCAACCCGA CGTGCTTCATCTGTCTCTATTACTCTTGTTGAAATGCAAGCGTGTACAGT GTGAAGATTTTCAGCCGAGCAGAACGTCCAGCCCTCATGCGCACTCCACT ACACGTTCGGACAGAAGGTGTTGATGATACGTTGTCGTGTGCCTGGCGTG CTCGCTTCCATGCTGTCTGCTGTCTGCTGCTCACGCCGTTTCGGGTGGTG CGTGGCGCTGGACTTGCTGCTCTGCTTGCTACTGCCTGAGTAGGTTGTGA AGGCGACGTTGGCGAAGAAAGAGCTGCAGGAGACCTTCCTCGAGTTCGAC CTTCTCGGCGTCCTGAAGCGCTGGCTGCAGGTTAGGAGAGCCATCAGACA CCGCCACCACCGTACTGCCCAACGCTAACCCTCGACCCTTTGAAAGTACC TACGCTAAGCTAAGCCAAGCTTAGCGGTAGGCTCTGTTCTCGATGGTGAC GCGGCGTGTTGGTGATGGGCGTGCGTGTGCACGCTCTTCTTGGTGATGGC AACAGCAACCAAGTGCGGGCGACAAAAAAACTGTGACGTTGTGGGTACAG TAGCAACGGATTACAGGGGAAAAGCTAGTCTCTTGCTTTGATTTCCAGAG GGTTGTACCACTGCTGCGAAGCGGCATCACTCTCTGCATTGTCAAGCACT AATGCTGGTGCTATTCCAGGTGCTTCATGAGCGAAATTGGTCAGCCGAAA CCACACGGGTAGTGTCGTTTGCTTGCGTTTCACAGCTCCTGTGTCTATCG AGGATGAACCAAGAGCTACGCCGACCAGTGTGACAGCCGCAACGACGAAA ATTTGTACGATGAAGTTTAAACGGTTGTGCGTGATCTCCGTGATCTCTGA TGCGCGAGCGGCAAGTGTATGACATTCGCAGCCGCAGTAGTAGCAGGAGC AGCAAAGGGCGTTCGCCCACGGACTTTCGGCGATACCATGTGGATACATC GACCCCGCCCCCCCTCGCCCCAACCTAGATGTTGAATAGCTTTACCCAAC GAGTCCCTGTGACGCTCCCCCATTATATTCTAAGCCCCTTCGCGCACGCA ATGTCGCGCGTTCCCTGCCGCCGCCGCCCCTCGTGTGATGCTGTGGATGA TTGGGTGATAAAAGCCCTACTCGAATGGCCAGCTGCCCAACCTCACCGTC AGGACGGACATCCTCAAGTTGATAGAAAACCTACCGGTACAGGTGGACCA CCTCAAGCGAAGCGGAATCGGGAAGGTGGTGATGGGGTTGCTCAACTGCG GGGAGGTGGGTGAAAGGTGGATTTGATTGTGATGATGCTAGTGGTGTGTT GGCCTGATTTATGCTCTTAGCTCGAGCTCCGCGTCTTTCGTCGTTGTGTG TGTTGTGGAGTATCTGCTCCGCGTTTGTGCTGTCTTGTCCCCTGTATTGG CTTGCATGTACCCTATCTTTCGTCTAGGTTCGGCGTAGCCATTGATAAGT ATGCGCAATGCCATTTTCTCGCTGGTCCATTCCTGTGGGGCTATCTTCTC CCCGTTTTTGTGCTTGCTCGTTGTGGACTACCGTACGCTATTTGGCCACC CGACACACGTACATGTGACCAGGGCCGTGCGATCATACTGCAATGCAAGC TGCGCCGAAGGTCGCGGTTGCACGCATTCACATAACCTCTGATTTGCGGC GACTGCAAGGTGCTTGAAGCGTTCACAATCCATTGTCCTGCTTGTATTGT AGCTCACCGAACTCGATGTAAAGGCTCGTTTCGAAAATCGTGGACCGCAG ATCAAGACCATCTCTGTATCACAAGGGCTAAAGCTACACAGTGTACACTT TACAACAGCCCGACGCGCACGCGTTTCAGTTTCCCCCTCGACTCCCTTCT AAACCACAACCTCCCACCTCGCCCCCCCAACAATAACCCAGCACGATCTC CTCTCCGCCTCGCATGCCCCCGAACGAAAGACGTCAAACACAAAAAGTAT GATGTCGCTTCCCCTCCCCCCCCCCGGGTTTTCATCGCCACGCGTCGCAG GAGACGACCGAAAACAAACGCCGCCTCCGGCAGCTGGTGAGCAAATGGAA CCGGCCCGTGTACGAGAAGGAGACTAACTACCGCGCCCGGCGCCCGGCGC AAGATGACCTCGAGGCCATGGAGGTCCCGTCTAGGGGAGGCGGGGGTGCC GCCGGTAGTGGCGTGAGGCGCCGAGTGGTCCACGGGAGCATGCGGCGCGA CGGGGCCAGCAAGGACGAAGCTGTAGGAAACATTCTCAACGCCAGGGCGA GGGGGCTGGACCCGACGAAGGCT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10590:545..5767+

>mRNA_Ecto-sp13_S_contig10590.548.1 ID=mRNA_Ecto-sp13_S_contig10590.548.1|Name=mRNA_Ecto-sp13_S_contig10590.548.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1704bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10590:545..5767+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGACGATGTGTTTGGGTCGGACTCCTCCGCCAACGAGTTTGACCCCGC
AGAAGAAGCCGACAATAACAACAACGAGGATGCGCCCAGCGGGGGTGCTG
GCGCTCTGGACTCCGATGGCGATGACGATGAGGGTATGACCAGAAACAAG
CCGGGCGCGTCGCCCACGGACGCGGGAGCCGCCTCGGGAGGGACAGGCCT
TAGTGACAGCGAGGACGATAATGACGAGGCCTTCCCGGCGGATGCCGATG
CAGAGAAGCTGGCAATGGATGCCGATGTGTTCGGTTCGGACAGCGAGGAC
GAGGTCGCGCCGCCGCCGGGGGGAGGAGCCAAGAACGATGACACGGCGGC
GGCAGACGTCGATCCTTTCGAGGAAAGCGACGACGAGGAGGGTGGGTCAG
GGGGCAAAACCCTCGGCAAGACCGGAGGCGGCCGGCTGAGCAAGGGGGGT
AGCTCCGGTAAAGGTAAAGGAAAGGGCAAGAAGCGCAAGGCGGATGCCGA
GGGTTCCAGCAAGTCGAAGCGCAAGAAGGGGATGGACGGGGAAGGGGAAG
GGGACAACCCCACAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAC
GGCGACGTCGAGGAAGGGGCGGAGGGTGGCAGTAGTAAGAAGACGACCAA
GAAGAAGAAGGGCAAGAAAAAGAAGTCCAAGAAGGCCAAGACGACAAGCG
TCGAGAGCTCGACCCTGCAAGACCTCGGGCTGGAGTCCTCGGCGGACGAA
GCGGCACAAGACCAAGACGATGACGATGACGACTTGAGCGACGCCGAGGT
AGAGCACCAAGACGAGGAGGATGAGGGGATAGGTGGCGATGCTGGTGAGG
AGGTGGCGAGGGCACCGAACAAGCGGACGAAGGAGGACGATGATTTTATC
GACGACGCGGACGATAACGCAGACCTGCTCAACGAGTACAAGCAGGACGA
GCCGGAAGGAGGAGACCACAGCGAGGCGGAGGAGGACAACAACCCAGAGA
ACTTTCACGATGCTCCTAAGAAGGAGAGCGCCATGACCGCGGTCCTGGCA
TCCATGAAGAAGCGTAAGGCTCAGGACCTGAGCACGGCGGAGCGCGAGCA
GATCGCCCAGGAGTTCATGTTCAAGATCAACCAGGCGGCGGAAGACGACG
AGGAGGCAGTGCAGAACGGACGACCGGCGATCTACAAGATCAAGATGATC
AGGGTTGTGAAGGCGACGTTGGCGAAGAAAGAGCTGCAGGAGACCTTCCT
CGAGTTCGACCTTCTCGGCGTCCTGAAGCGCTGGCTGCAGCCCTACTCGA
ATGGCCAGCTGCCCAACCTCACCGTCAGGACGGACATCCTCAAGTTGATA
GAAAACCTACCGGTACAGGTGGACCACCTCAAGCGAAGCGGAATCGGGAA
GGTGGTGATGGGGTTGCTCAACTGCGGGGAGGAGACGACCGAAAACAAAC
GCCGCCTCCGGCAGCTGGTGAGCAAATGGAACCGGCCCGTGTACGAGAAG
GAGACTAACTACCGCGCCCGGCGCCCGGCGCAAGATGACCTCGAGGCCAT
GGAGGTCCCGTCTAGGGGAGGCGGGGGTGCCGCCGGTAGTGGCGTGAGGC
GCCGAGTGGTCCACGGGAGCATGCGGCGCGACGGGGCCAGCAAGGACGAA
GCTGTAGGAAACATTCTCAACGCCAGGGCGAGGGGGCTGGACCCGACGAA
GGCT
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