prot_Ecto-sp13_S_contig1059.547.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1059.547.1
Unique Nameprot_Ecto-sp13_S_contig1059.547.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1137
Homology
BLAST of mRNA_Ecto-sp13_S_contig1059.547.1 vs. uniprot
Match: A0A6H5JHM0_9PHAE (PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHM0_9PHAE)

HSP 1 Score: 1112 bits (2875), Expect = 0.000e+0
Identity = 911/1096 (83.12%), Postives = 928/1096 (84.67%), Query Frame = 0
Query:    1 MSQMQDTTLAKTEAEKERCRVLQGLQAEHAAARAAARDGLEQARALFRDEELPPEDAESLPLPALLARVRAVASDRRCRQTRLEVELTAALSALAAARREGGESRGVAEQLRAEAGEASXXXXXXXXXXXXXXEEATRERGLRATAEASLEACKDRLEAIMVDVEQGQVNLGIMAGERRAAVAKAAELSEQKRLLVREVKLSRRALAEATSVNRRLARAYESLEQSLRTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAADKGGCGTAAAVPSPSEDGACDSEKAVGTAAPVAAARAAGERAVSDSSTDGGGAGLAANPTPLLRPETQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGRGRREEWREARLDCTLVEAGRRSRGSSVGXXXXXXXXXX-RESAGSWHGAREGSAPGPGLMMQFRNLSTGDVDVLVPSSEKPRGRASIESGGGDPVESRAPAATFEPHSSNLGLKITQTFAAASWPWAPKPSIEARAATAXXXXXXXXXXXXXTGNSTAVGAGDSAGARGGRSGSXXSIIXXXXXXXXXXXXXXXXXGDNCGSDARDGESAAAVTGSAAVDAAXXXXXXXXXXXX---YSAFVGAFEGVISSMGSSGGARDGQTVVPSLVLDEDXXXXXXXXXXXXXXGPLPSDTVTDVCGLDGGRPPAASWGGSGEVGGEVAAGGRAVPRRSVGALVCRRCGGTAEGPQNSTCTCLVPELGTGGAEPFDRDENQTTAGLSKLKGVFKSFNGGVKVARQMLDTAVRQNVAHNVPPVVAARSSSGGDRRPSLSSSVHAEATGSSXXXXXXXXXXXXXXPARASGVXXXDST-------------DATAGDRTGGDGVAAAAVIVSRASEDKAFSGDGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPDGSDDAGSVASGDGDDPSEGGGKNGXXXXXXXXXXXXXXXXXXXXXXXXXXXRAATGATAVVAASILPVSEDEDIAGEEAGAEKEEAEIRTSRSGENDADGGGTLDDYSRSPAEDDGGDADSTPGGGTEATAAGAPEAFIEHAAGVVSDDGTDVAAEARAG 1079
            MSQMQDTT AKTEAEKERCRVLQGLQAEHAAARAAARDGLEQARALFRDEELPPEDAESLPLPALLARVRAVASDRRCRQ RLEVEL AAL+ALAAARRE GESRGVAEQLRAEAG   XXXXXXXXXXXXXXEEATRERGLRATAEASLEACKDRLEAIMVDVEQGQVNLGIMAGERRAAVAK AELSEQKRLLVREVKLSRR+LAEA+SVNRRL RAYESLEQSLRTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 PS+DGACDS KAVGTAAPVAAARAAGERAVSDSST+GGGAGLAANP PLLRP T+EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       EEWREARLD T VEAGRRSRG S  XXXXXXXXX  R S GSWHGAREGSA GPGLMMQFRNLSTGDVDVLVP SEKPRGRAS ESGGG PVESRAPAATFEPHSSNLGLKITQTFAAASWPWAPK S EARA   XXXXXXXXXXXXX+G+STAVGAGDSAGARGG    XX   XXXXXXXXXXXXXXX  GD+CGSDARDGESAAA  GSAAVD  XXXXXXXXXXXX   YSAFVGAFEGVI SMGSSGGARDGQTVVPSLVLDEDXXXXXXXXXXXXXXG LPSDTVTDVCGLDGGRP AA WGGSGEVGGEVAAGGRAVPRRSVGALVCRRCGGTAEGPQNSTCTC VPELGTGGAEP DRDE Q TAGLSKLKGVFKSFNGGV+VARQMLDTAVRQNVAHNVPP VAARSS GGDRRPSLSSSV  EA GSSXXXXXXXXXXXXXX       XXX                DATAGDRTGGD VAAAAVIVS ASED    GDGA    XXXXXXXXX   XXXXXXXX       +PDG DDAG VA GDGDDPS+ G  +               XXXXXXXXX      ATGA AVVAA IL V ED++ AGEEAGAEKEEAEIRT  SGENDADGGG LD+ S SPAEDDGGDADS PGG  +ATAAGAPEAFIEHAAGV SDD TDVAAEARAG
Sbjct:  266 MSQMQDTTSAKTEAEKERCRVLQGLQAEHAAARAAARDGLEQARALFRDEELPPEDAESLPLPALLARVRAVASDRRCRQARLEVELAAALNALAAARREEGESRGVAEQLRAEAGXXXXXXXXXXXXXXXXXEEATRERGLRATAEASLEACKDRLEAIMVDVEQGQVNLGIMAGERRAAVAKVAELSEQKRLLVREVKLSRRSLAEASSVNRRLVRAYESLEQSLRTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------PSDDGACDSGKAVGTAAPVAAARAAGERAVSDSSTNGGGAGLAANPIPLLRPGTREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---EEWREARLDGTAVEAGRRSRGGSXXXXXXXXXXXVGRGSTGSWHGAREGSATGPGLMMQFRNLSTGDVDVLVPPSEKPRGRASTESGGGPPVESRAPAATFEPHSSNLGLKITQTFAAASWPWAPKSSTEARAXXXXXXXXXXXXXXXXSGSSTAVGAGDSAGARGGXXXXXXXXXXXXXXXXXXXXXXXXGSGDSCGSDARDGESAAATAGSAAVDXXXXXXXXXXXXXXXXXYSAFVGAFEGVICSMGSSGGARDGQTVVPSLVLDEDXXXXXXXXXXXXXXGQLPSDTVTDVCGLDGGRPLAARWGGSGEVGGEVAAGGRAVPRRSVGALVCRRCGGTAEGPQNSTCTCSVPELGTGGAEPLDRDETQATAGLSKLKGVFKSFNGGVQVARQMLDTAVRQNVAHNVPPAVAARSSLGGDRRPSLSSSVRVEAAGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDATAGDRTGGDSVAAAAVIVSPASEDNTVRGDGAGDGNXXXXXXXXXTAVXXXXXXXXTADAITDNPDGGDDAGYVAPGDGDDPSDCGSNSSGAATPAAVSTISGTXXXXXXXXXSDGDGVATGAPAVVAAGILAVGEDDENAGEEAGAEKEEAEIRTGGSGENDADGGGVLDN-SPSPAEDDGGDADSNPGGDIKATAAGAPEAFIEHAAGVGSDDATDVAAEARAG 1351          
BLAST of mRNA_Ecto-sp13_S_contig1059.547.1 vs. uniprot
Match: D8LCP7_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCP7_ECTSI)

HSP 1 Score: 523 bits (1347), Expect = 4.900e-165
Identity = 435/520 (83.65%), Postives = 437/520 (84.04%), Query Frame = 0
Query:    1 MSQMQDTTLAKTEAEKERCRVLQGLQAEHAAARAAARDGLEQARALFRDEELPPEDAESLPLPALLARVRAVASDRRCRQTRLEVELTAALSALAAARREGGESRGVAEQLRAEAGEASXXXXXXXXXXXXXXEEATRERGLRATAEASLEACKDRLEAIMVDVEQGQVNLGIMAGERRAAVAKAAELSEQKRLLVREVKLSRRALAEATSVNRRLARAYESLEQSLRTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAADKGGCGTAAA---VPSPSEDGACDSEKAVGTAAPVAAARAAGERAVSDSSTDGGGAGLAANPTPLLRPETQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGRGR-------REEWREARLDCTLVEAGRRSRGSSVGXXXXXXXXXXRESAGSWHGAREGSAPGPGLMMQFRNLSTGDVDVLVPSSEKPRGRASIESGGGDPVESRAPAATFEPHSSNLGLKITQTFAAASWP 510
            MSQMQDTT AKTEAEKERCRVLQGLQAEHAA RAAARDGLEQARALFRDEELPPEDAESLPLPALLARVRAVASDRRCRQTRLEVEL AALSALAAAR E GESRGVAEQL        XXXXXXXXXXXXXXEEATRERGLRATAEASLEACKDRLEAIMVDVEQGQVNLGIMAGERRAA AKAAELSEQKRLLVREVKLSRR+LAEATSVNRRLARAYESLEQSLRTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                  PSPSEDGACDS KAVG AAPV AARAAGERAVSDSSTDG                   XXXXXXXXXXXXXXXXXXX      XXXXXXXXXXXXX             REEWREARLD T +EAGRRSRG SV XXXXXXXXXX  SAGSWHGAREGSA GPGLMMQFRNLSTGDVDVLVP SEKPRGRAS ESGGG PVESRAPAATFEPHSSNLGLKITQTFAAASWP
Sbjct:  261 MSQMQDTTSAKTEAEKERCRVLQGLQAEHAAVRAAARDGLEQARALFRDEELPPEDAESLPLPALLARVRAVASDRRCRQTRLEVELAAALSALAAARNEEGESRGVAEQLXXXXXXXXXXXXXXXXXXXXXXEEATRERGLRATAEASLEACKDRLEAIMVDVEQGQVNLGIMAGERRAAAAKAAELSEQKRLLVREVKLSRRSLAEATSVNRRLARAYESLEQSLRTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSPSEDGACDSGKAVGLAAPVEAARAAGERAVSDSSTDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPLVEGXXXXXXXXXXXXXXXXXXXXXXXXXXREEWREARLDGTAIEAGRRSRGGSVXXXXXXXXXXXXRSAGSWHGAREGSATGPGLMMQFRNLSTGDVDVLVPPSEKPRGRASTESGGGGPVESRAPAATFEPHSSNLGLKITQTFAAASWP 780          
BLAST of mRNA_Ecto-sp13_S_contig1059.547.1 vs. uniprot
Match: A0A835Z0T3_9STRA (PH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0T3_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 5.740e-10
Identity = 42/71 (59.15%), Postives = 54/71 (76.06%), Query Frame = 0
Query:  156 RLEAIMVDVEQGQVNLGIMAGERRAAVAKAAELSEQKRLLVREVKLSRRALAEATSVNRRLARAYESLEQS 226
            +L   ++  EQGQVNLGI+AGERRA   +AA L++QKR+LVREV+ +R ALA+A  VN RLA AYE+L  S
Sbjct:  370 QLREALLQAEQGQVNLGILAGERRALEGRAAALADQKRVLVREVRAARAALADAQRVNARLAAAYEALAAS 440          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1059.547.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JHM0_9PHAE0.000e+083.12PH domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D8LCP7_ECTSI4.900e-16583.65PH domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A835Z0T3_9STRA5.740e-1059.15PH domain-containing protein n=1 Tax=Tribonema min... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 108..142
NoneNo IPR availableCOILSCoilCoilcoord: 206..226

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1059contigEcto-sp13_S_contig1059:11794..18818 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1059.547.1mRNA_Ecto-sp13_S_contig1059.547.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1059 10372..18830 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1059.547.1 ID=prot_Ecto-sp13_S_contig1059.547.1|Name=mRNA_Ecto-sp13_S_contig1059.547.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1137bp
MSQMQDTTLAKTEAEKERCRVLQGLQAEHAAARAAARDGLEQARALFRDE
ELPPEDAESLPLPALLARVRAVASDRRCRQTRLEVELTAALSALAAARRE
GGESRGVAEQLRAEAGEASARATNAEARVERAEEEATRERGLRATAEASL
EACKDRLEAIMVDVEQGQVNLGIMAGERRAAVAKAAELSEQKRLLVREVK
LSRRALAEATSVNRRLARAYESLEQSLRTTTSSPVPSSSSFSEEAPPPPS
TTTATAATSAASADAAAAAAVGAAADKGGCGTAAAVPSPSEDGACDSEKA
VGTAAPVAAARAAGERAVSDSSTDGGGAGLAANPTPLLRPETQEEEAAGA
AAAAAAAAGAPVSPVVEGLLGGGGGGGARGGGVGGRGRREEWREARLDCT
LVEAGRRSRGSSVGGGGGKGGGGGRESAGSWHGAREGSAPGPGLMMQFRN
LSTGDVDVLVPSSEKPRGRASIESGGGDPVESRAPAATFEPHSSNLGLKI
TQTFAAASWPWAPKPSIEARAATAAAATPAAGTGTAATGNSTAVGAGDSA
GARGGRSGSGSSIISGGSAGGGVGEATAGGSGDNCGSDARDGESAAAVTG
SAAVDAAAGAGSGGGGGGGYSAFVGAFEGVISSMGSSGGARDGQTVVPSL
VLDEDDDDNGLSGDSGGGGGPLPSDTVTDVCGLDGGRPPAASWGGSGEVG
GEVAAGGRAVPRRSVGALVCRRCGGTAEGPQNSTCTCLVPELGTGGAEPF
DRDENQTTAGLSKLKGVFKSFNGGVKVARQMLDTAVRQNVAHNVPPVVAA
RSSSGGDRRPSLSSSVHAEATGSSGSDAAAAAATDAAAPARASGVSGVDS
TDATAGDRTGGDGVAAAAVIVSRASEDKAFSGDGAGNGTNDGAAAGAATA
AGAGAAGAATAVAIAVDPDGSDDAGSVASGDGDDPSEGGGKNGGAATRAA
VSTISDTPDDGDDAGGSDGDRAATGATAVVAASILPVSEDEDIAGEEAGA
EKEEAEIRTSRSGENDADGGGTLDDYSRSPAEDDGGDADSTPGGGTEATA
AGAPEAFIEHAAGVVSDDGTDVAAEARAGAVTSLPAAAAAAVVVPAEAAT
ASAEKREEGEEGQDVATQQRPKPKKSGRRGRRERRR*
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