prot_Ecto-sp13_S_contig10579.536.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10579.536.1
Unique Nameprot_Ecto-sp13_S_contig10579.536.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length234
Homology
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BLAST of mRNA_Ecto-sp13_S_contig10579.536.1 vs. uniprot
Match: A0A6H5KH63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH63_9PHAE)

HSP 1 Score: 244 bits (622), Expect = 8.970e-73
Identity = 189/233 (81.12%), Postives = 195/233 (83.69%), Query Frame = 0 
Query:    1 MSRDEFRRKTRTIAKDVEVVQAPLPVMSESAMDADAYGREGDDGRGXXXXXXVKAFVTSKSGTRKIGFAGTGGRSGTGRVAVKSAXXXXXXXXXXXXXXXXXXXXXXXXTAVPALLREADRAVVQSDTDSDEXXXXXSVNSSDLVDDTEDSWXXXXXXXXDGDRVSEISEIVGDESFAAEEDDEAKEKVQEKGKGDKSPRTPPSRGGRVAGRGPGKEASASKRNGGSSRRKRA 233
            MSRDEFRRKTRTIAKDVEVVQAP P MSESAMDADAYGR+GDDG         K F+TSKSGTRKIGFAGTGGRSGTGRVA KSA XXXXXXXXXXXXXXXXXXX     AVPALLREADRAVVQSDTDSD XXXXXSVNSSDLVD      XXXXXXXX   RVSE SEI GDES AA    EAKEKVQEKGKGD+SPRTPP+RGGRVAGRG GK ASASK++GGSSRRKRA
Sbjct:  497 MSRDEFRRKTRTIAKDVEVVQAPPPAMSESAMDADAYGRDGDDGGAGAGAG--KPFMTSKSGTRKIGFAGTGGRSGTGRVAGKSAGXXXXXXXXXXXXXXXXXXXA---AAVPALLREADRAVVQSDTDSDXXXXXXSVNSSDLVDXXXXXXXXXXXXXXXXXRVSEESEIFGDESSAAXXXXEAKEKVQEKGKGDESPRTPPTRGGRVAGRGRGKGASASKKSGGSSRRKRA 724
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BLAST of mRNA_Ecto-sp13_S_contig10579.536.1 vs. uniprot
Match: D7G0F0_ECTSI (Tau95 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0F0_ECTSI)

HSP 1 Score: 177 bits (448), Expect = 2.140e-47
Identity = 166/236 (70.34%), Postives = 167/236 (70.76%), Query Frame = 0 
Query:    1 MSRDEFRRKTRTIAKDVEVVQAPLPVMSESAMDADAYGREGDDGRGXXXXXXVKAFVTSKSGTRKIGFAGTGGRSGTGRVAVKSAXXXXXXXXXXXXXXXXXXXXXXXXTAVPALLREADRAVVQSDTDSDEXXXXXSVNSSDLVDDTEDSWXXXXXXXXDGDRVSEISEIVGDESFAAEEDDEAKEKVQEK---GKGDKSPRTPPSRGGRVAGRGPGKEASASKRNGGSSRRKRA 233
            MSRDEFRRKTRTIAKDVEVVQAP P MSESAMDADAYGREGDDGRG       KAFVT KSG RKIGFAGTGGRSGTGRVA KSA XXXXXXXXXXXXXXXXXXXXXXX  VPALLREADRAVVQSDTDSDEXXXXX     DLV       XXXXXXXX                                   GK DKSPRTPPSRGGR AGRG     SASKR+GGSSRRKRA
Sbjct:  625 MSRDEFRRKTRTIAKDVEVVQAPPPAMSESAMDADAYGREGDDGRGGAGAG--KAFVTRKSGARKIGFAGTGGRSGTGRVAGKSAGXXXXXXXXXXXXXXXXXXXXXXX--VPALLREADRAVVQSDTDSDEXXXXXXXXXXDLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKRDKSPRTPPSRGGRAAGRGXXXXXSASKRSGGSSRRKRA 856
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10579.536.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KH63_9PHAE8.970e-7381.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0F0_ECTSI2.140e-4770.34Tau95 domain-containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10579contigEcto-sp13_S_contig10579:1449..3039 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10579.536.1mRNA_Ecto-sp13_S_contig10579.536.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10579 111..4195 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10579.536.1 ID=prot_Ecto-sp13_S_contig10579.536.1|Name=mRNA_Ecto-sp13_S_contig10579.536.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=234bp
MSRDEFRRKTRTIAKDVEVVQAPLPVMSESAMDADAYGREGDDGRGGGGG
GGVKAFVTSKSGTRKIGFAGTGGRSGTGRVAVKSAAAGGGGGGGKRPAGG
AAGGAGGAATAVPALLREADRAVVQSDTDSDEDSESDSVNSSDLVDDTED
SWDSQQDDTSDGDRVSEISEIVGDESFAAEEDDEAKEKVQEKGKGDKSPR
TPPSRGGRVAGRGPGKEASASKRNGGSSRRKRA*
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