prot_Ecto-sp13_S_contig1054.507.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1054.507.1
Unique Nameprot_Ecto-sp13_S_contig1054.507.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length385
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1054.507.1 vs. uniprot
Match: D7FUI2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUI2_ECTSI)

HSP 1 Score: 195 bits (496), Expect = 2.630e-58
Identity = 104/132 (78.79%), Postives = 114/132 (86.36%), Query Frame = 0 
Query:  183 MIVNFSKKRCRQRGSIVSIEHGEFLQAFLRLRRDLLKKQQGNGCDRTARKPKSPVNGVRGPESSQTPRATSSLPLLSLRRSLSGTTRVEDGNLHRAVDADTINRSLAKVDRAALSYDPRRVENLRQADLSRV 314
            MIVNFSKKRCRQ GSI+SIEHGEF QAFLRLRRDLLKK+QGNGC +TA KPKS ++G+RGPESS+T R TSSLPLLSLRRSL G TRVEDGNLHRAVDADTINR+LAKVDRAA SYDPRR   L  +   R+
Sbjct:    1 MIVNFSKKRCRQGGSIISIEHGEFSQAFLRLRRDLLKKEQGNGCGKTAHKPKSLIDGIRGPESSKTSRDTSSLPLLSLRRSLPGMTRVEDGNLHRAVDADTINRALAKVDRAAWSYDPRRTVRLTSSAFGRI 132
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1054.507.1 vs. uniprot
Match: A0A7S1XWY9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XWY9_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.250e-8
Identity = 64/247 (25.91%), Postives = 108/247 (43.72%), Query Frame = 0 
Query:  125 RRVLHSALDKARDVALHLSWEDWRGVKAFDGPSLTPADIKDLFWRNFRVKLSAAEAEAMIVNFSKKRCRQRGSIVSIEHGEFLQAFLRLRRDLLKKQQGNGCDRTARKPKSPVNGVRGPESSQTPRATSSLPLLSLRRSLSGTTRVEDGNLHRAVDADTINRSLAKVDRAALSYDPRRVENLRQADLSRVSTPRSFGGVLLARFDVRVDPVEQSELVTLLQ-DENGAVDVERFRTYFLGLIKDHAQE 370
            R  L +AL K  D A  L W +    K F+   L  +D++DLF++NFR++L+ AEA A++  F        G +   ++ EFL  FL+L          N  +R  +  +  ++G+R  E            +   +       +     +         NR+L K+ RAA  +DP R   L    +  +  P +F  +L  +F V+V+  E   L+     D NGA+D   F + F+   ++  +E
Sbjct:  124 RHDLDTALHKVSDAAGKLEWSEENPFKNFEKLELDVSDLRDLFFKNFRLRLTIAEASALLDFFDHD---DNGGV---DYAEFLTTFLKL----------NVSEREKQHKQQVLDGIRAQER-----------IARFKARYDARFKAPVAEMAETYTEVDRNRALQKIARAAGDHDPMRDGGLTSLGME-LMYPTAFKELLRRQFHVKVNAAELKALMDYFDADGNGAIDPTEFLSAFMRAGREAREE 342
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1054.507.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FUI2_ECTSI2.630e-5878.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1XWY9_9STRA1.250e-825.91Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1054contigEcto-sp13_S_contig1054:5770..9923 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1054.507.1mRNA_Ecto-sp13_S_contig1054.507.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1054 5642..9923 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1054.507.1 ID=prot_Ecto-sp13_S_contig1054.507.1|Name=mRNA_Ecto-sp13_S_contig1054.507.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=385bp
MNRGIYLVPSSCSQLQPIRPGHVDRHSHTRIDEVERMERVLRKSRSEHSV
RPLDPDCPAPLIARAFRLSNLYGVSPTTKLARKGAGERSNRNHQLRRQQT
GGSPGSSREEEEGRQQQTKTRKRQRRVLHSALDKARDVALHLSWEDWRGV
KAFDGPSLTPADIKDLFWRNFRVKLSAAEAEAMIVNFSKKRCRQRGSIVS
IEHGEFLQAFLRLRRDLLKKQQGNGCDRTARKPKSPVNGVRGPESSQTPR
ATSSLPLLSLRRSLSGTTRVEDGNLHRAVDADTINRSLAKVDRAALSYDP
RRVENLRQADLSRVSTPRSFGGVLLARFDVRVDPVEQSELVTLLQDENGA
VDVERFRTYFLGLIKDHAQEVVNEGAPSLPPVFA*
back to top