prot_Ecto-sp13_S_contig1052.494.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1052.494.1
Unique Nameprot_Ecto-sp13_S_contig1052.494.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length103
Homology
BLAST of mRNA_Ecto-sp13_S_contig1052.494.1 vs. uniprot
Match: D7G356_ECTSI (Sporulation-specific protein 11 homologue n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G356_ECTSI)

HSP 1 Score: 187 bits (474), Expect = 9.060e-57
Identity = 89/99 (89.90%), Postives = 96/99 (96.97%), Query Frame = 0
Query:    5 NKAHVSPLHFLRRIPSVLVTGQGFPPLAVRACVYRLAEALDLPVLGLVDCNPFGLSVFLQFKEGSSRQGRGSAKFRVPEMKWVGLRPSQLDDLNLPEEA 103
            ++A+VS LH+LRRIPSVLVTGQGFPPLAVRACVYRLAEALDLPVLGLVDCNPFGLSVFLQ+KEGSSRQGRGSAKF VPEMKWVGLRPSQLDDL+LP+E 
Sbjct:  126 DRANVSTLHYLRRIPSVLVTGQGFPPLAVRACVYRLAEALDLPVLGLVDCNPFGLSVFLQYKEGSSRQGRGSAKFGVPEMKWVGLRPSQLDDLDLPDEV 224          
BLAST of mRNA_Ecto-sp13_S_contig1052.494.1 vs. uniprot
Match: A0A6H5KRW2_9PHAE (TP6A_N domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRW2_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 5.000e-49
Identity = 77/81 (95.06%), Postives = 81/81 (100.00%), Query Frame = 0
Query:   23 VTGQGFPPLAVRACVYRLAEALDLPVLGLVDCNPFGLSVFLQFKEGSSRQGRGSAKFRVPEMKWVGLRPSQLDDLNLPEEA 103
            +TGQGFPPLAVRACVYRLAEALDLPVLGLVDCNPFGLSVFLQ+KEGSS+QGRGSAKFRVPEMKWVGLRPSQLDDL+LPEEA
Sbjct:  127 ITGQGFPPLAVRACVYRLAEALDLPVLGLVDCNPFGLSVFLQYKEGSSKQGRGSAKFRVPEMKWVGLRPSQLDDLDLPEEA 207          
BLAST of mRNA_Ecto-sp13_S_contig1052.494.1 vs. uniprot
Match: A0A836CJS5_9STRA (Spo11/DNA topoisomerase VI subunit A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJS5_9STRA)

HSP 1 Score: 107 bits (267), Expect = 2.150e-26
Identity = 52/97 (53.61%), Postives = 68/97 (70.10%), Query Frame = 0
Query:    7 AHVSPLHFLRRIPSVLVTGQGFPPLAVRACVYRLAEALDLPVLGLVDCNPFGLSVFLQFKEGSSRQGRGSAKFRVPEMKWVGLRPSQLDDLNLPEEA 103
            A +S   F  R+P ++VTGQGFPP+AVRA V  L  AL+LP  GLVDC PFGLS+ L +  G +R G  +A +   ++KW+GLRPSQLD L+LP +A
Sbjct:  130 ARLSEDRFYDRLPCIIVTGQGFPPVAVRAMVRALQSALNLPAYGLVDCGPFGLSLLLTYVHGGARMGEQAAHYTA-DVKWLGLRPSQLDALDLPAQA 225          
BLAST of mRNA_Ecto-sp13_S_contig1052.494.1 vs. uniprot
Match: D0MT30_PHYIT (TP6A_N domain-containing protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MT30_PHYIT)

HSP 1 Score: 102 bits (253), Expect = 9.410e-24
Identity = 48/90 (53.33%), Postives = 64/90 (71.11%), Query Frame = 0
Query:   14 FLRRIPSVLVTGQGFPPLAVRACVYRLAEALDLPVLGLVDCNPFGLSVFLQFKEGSSRQGRGSAKFRVPEMKWVGLRPSQLDDLNLPEEA 103
            F   +PS+L+TG+GFP LA RA V  L+ AL +PVLGL DCNPFGLS+ L +K GS+R    S ++ V ++KWVG+RPSQ+  L LP  +
Sbjct:  191 FFETVPSILITGRGFPDLATRAFVNLLSNALGIPVLGLCDCNPFGLSIMLTYKLGSARMPLDSLRYAV-DIKWVGVRPSQVSHLGLPTSS 279          
BLAST of mRNA_Ecto-sp13_S_contig1052.494.1 vs. uniprot
Match: W2KQB5_PHYPR (TP6A_N domain-containing protein n=2 Tax=Phytophthora parasitica TaxID=4792 RepID=W2KQB5_PHYPR)

HSP 1 Score: 101 bits (252), Expect = 2.310e-23
Identity = 48/87 (55.17%), Postives = 64/87 (73.56%), Query Frame = 0
Query:   14 FLRRIPSVLVTGQGFPPLAVRACVYRLAEALDLPVLGLVDCNPFGLSVFLQFKEGSSRQGRGSAKFRVPEMKWVGLRPSQLDDLNLP 100
            F   +PS+L+TG+GFP LA R  V  L  AL++PVLGL DCNPFGLS+ L +K GS+R    S ++ V ++KWVG+RPSQ+ DL+LP
Sbjct:  240 FFEIVPSILITGRGFPDLATRVFVSLLRSALEIPVLGLCDCNPFGLSIMLTYKLGSARMPLESLQYAV-DIKWVGVRPSQIADLDLP 325          
BLAST of mRNA_Ecto-sp13_S_contig1052.494.1 vs. uniprot
Match: A0A2P4X7X3_9STRA (Topoisomerase acting in meiosis n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X7X3_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 3.570e-23
Identity = 47/90 (52.22%), Postives = 64/90 (71.11%), Query Frame = 0
Query:   14 FLRRIPSVLVTGQGFPPLAVRACVYRLAEALDLPVLGLVDCNPFGLSVFLQFKEGSSRQGRGSAKFRVPEMKWVGLRPSQLDDLNLPEEA 103
            F   +PSVL+TG+GFP LA R  V  L+ AL++PVLG+ DCNPFGLS+ L +K GS+R    S ++ V ++KWVG+RPSQ+  L LP  +
Sbjct:  145 FFEMVPSVLITGRGFPDLATRIFVSLLSRALEIPVLGICDCNPFGLSIMLTYKLGSARMPLESLQYAV-DIKWVGVRPSQIAGLGLPTSS 233          
BLAST of mRNA_Ecto-sp13_S_contig1052.494.1 vs. uniprot
Match: G4ZQQ3_PHYSP (TP6A_N domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZQQ3_PHYSP)

HSP 1 Score: 100 bits (249), Expect = 4.940e-23
Identity = 47/90 (52.22%), Postives = 65/90 (72.22%), Query Frame = 0
Query:   14 FLRRIPSVLVTGQGFPPLAVRACVYRLAEALDLPVLGLVDCNPFGLSVFLQFKEGSSRQGRGSAKFRVPEMKWVGLRPSQLDDLNLPEEA 103
            F + +PS+L+TG+GFP LA R  V  L+ AL +PVLGL DCNPFGLS+ L +K GS+R    S ++ V ++KWVG+RPSQ+  L LP+ +
Sbjct:  218 FYKMVPSILITGRGFPDLATRVFVSLLSHALKIPVLGLCDCNPFGLSIMLTYKLGSARMPLESLEYAV-DIKWVGVRPSQIAALGLPQSS 306          
BLAST of mRNA_Ecto-sp13_S_contig1052.494.1 vs. uniprot
Match: W2PU68_PHYPN (Apple domain-containing protein n=6 Tax=Phytophthora parasitica TaxID=4792 RepID=W2PU68_PHYPN)

HSP 1 Score: 101 bits (252), Expect = 5.050e-23
Identity = 48/87 (55.17%), Postives = 64/87 (73.56%), Query Frame = 0
Query:   14 FLRRIPSVLVTGQGFPPLAVRACVYRLAEALDLPVLGLVDCNPFGLSVFLQFKEGSSRQGRGSAKFRVPEMKWVGLRPSQLDDLNLP 100
            F   +PS+L+TG+GFP LA R  V  L  AL++PVLGL DCNPFGLS+ L +K GS+R    S ++ V ++KWVG+RPSQ+ DL+LP
Sbjct:  364 FFEIVPSILITGRGFPDLATRVFVSLLRNALEIPVLGLCDCNPFGLSIMLTYKLGSARMPLESLQYAV-DIKWVGVRPSQIADLDLP 449          
BLAST of mRNA_Ecto-sp13_S_contig1052.494.1 vs. uniprot
Match: A0A7S2JQ12_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JQ12_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 8.250e-23
Identity = 45/92 (48.91%), Postives = 66/92 (71.74%), Query Frame = 0
Query:   14 FLRRIPSVLVTGQGFPPLAVRACVYRLAEALDLPVLGLVDCNPFGLSVFLQFKEGSSRQGRGSAKFRVPEMKWVGLRPSQLDDLN--LPEEA 103
            F  ++P +L+TG+GFP LA RACV+ L   L++PV GL DCNPFG+SV + +  GSS+ G  +  + VP +KW+GLRPS +++L+  LP+E 
Sbjct:  203 FFDKVPCILITGKGFPDLASRACVFALHNMLNIPVYGLCDCNPFGVSVLMTYWRGSSKLGNDADSYSVP-VKWLGLRPSHIEELSPELPQEV 293          
BLAST of mRNA_Ecto-sp13_S_contig1052.494.1 vs. uniprot
Match: A0A8K1C609_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C609_PYTOL)

HSP 1 Score: 99.8 bits (247), Expect = 8.840e-23
Identity = 47/90 (52.22%), Postives = 66/90 (73.33%), Query Frame = 0
Query:   14 FLRRIPSVLVTGQGFPPLAVRACVYRLAEALDLPVLGLVDCNPFGLSVFLQFKEGSSRQGRGSAKFRVPEMKWVGLRPSQLDDLNLPEEA 103
            F+ ++PS++VTG+GFP LA R  V  L+  L+LPV+GL DCNPFGLS+ L +K GS+R    +  F V ++KWVGLRPS+++ L+LP  A
Sbjct:  211 FVDQLPSIIVTGRGFPDLATREFVSLLSRTLELPVIGLSDCNPFGLSIMLTYKLGSARMPLDTRPFGV-DIKWVGLRPSRIEQLDLPPTA 299          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1052.494.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G356_ECTSI9.060e-5789.90Sporulation-specific protein 11 homologue n=1 Tax=... [more]
A0A6H5KRW2_9PHAE5.000e-4995.06TP6A_N domain-containing protein (Fragment) n=1 Ta... [more]
A0A836CJS5_9STRA2.150e-2653.61Spo11/DNA topoisomerase VI subunit A n=1 Tax=Tribo... [more]
D0MT30_PHYIT9.410e-2453.33TP6A_N domain-containing protein n=2 Tax=Phytophth... [more]
W2KQB5_PHYPR2.310e-2355.17TP6A_N domain-containing protein n=2 Tax=Phytophth... [more]
A0A2P4X7X3_9STRA3.570e-2352.22Topoisomerase acting in meiosis n=2 Tax=Phytophtho... [more]
G4ZQQ3_PHYSP4.940e-2352.22TP6A_N domain-containing protein n=1 Tax=Phytophth... [more]
W2PU68_PHYPN5.050e-2355.17Apple domain-containing protein n=6 Tax=Phytophtho... [more]
A0A7S2JQ12_9STRA8.250e-2348.91Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A8K1C609_PYTOL8.840e-2352.22Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002815Spo11/DNA topoisomerase VI subunit APRINTSPR01550TOP6AFAMILYcoord: 53..69
score: 36.03
coord: 21..42
score: 38.07
IPR002815Spo11/DNA topoisomerase VI subunit APANTHERPTHR10848MEIOTIC RECOMBINATION PROTEIN SPO11coord: 13..102
NoneNo IPR availableGENE3D3.40.1360.10coord: 9..103
e-value: 6.8E-29
score: 102.9
IPR036078Spo11/DNA topoisomerase VI subunit A superfamilySUPERFAMILY56726DNA topoisomerase IV, alpha subunitcoord: 13..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1052contigEcto-sp13_S_contig1052:10438..11131 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1052.494.1mRNA_Ecto-sp13_S_contig1052.494.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1052 10438..11131 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1052.494.1 ID=prot_Ecto-sp13_S_contig1052.494.1|Name=mRNA_Ecto-sp13_S_contig1052.494.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=103bp
MFLPNKAHVSPLHFLRRIPSVLVTGQGFPPLAVRACVYRLAEALDLPVLG
LVDCNPFGLSVFLQFKEGSSRQGRGSAKFRVPEMKWVGLRPSQLDDLNLP
EEA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002815Spo11/TopoVI_A
IPR036078Spo11/TopoVI_A_sf