mRNA_Ecto-sp13_S_contig1052.494.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1052.494.1 vs. uniprot
Match: D7G356_ECTSI (Sporulation-specific protein 11 homologue n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G356_ECTSI) HSP 1 Score: 187 bits (474), Expect = 9.060e-57 Identity = 89/99 (89.90%), Postives = 96/99 (96.97%), Query Frame = 1
Query: 13 NKAHVSPLHFLRRIPSVLVTGQGFPPLAVRACVYRLAEALDLPVLGLVDCNPFGLSVFLQFKEGSSRQGRGSAKFRVPEMKWVGLRPSQLDDLNLPEEA 309
++A+VS LH+LRRIPSVLVTGQGFPPLAVRACVYRLAEALDLPVLGLVDCNPFGLSVFLQ+KEGSSRQGRGSAKF VPEMKWVGLRPSQLDDL+LP+E
Sbjct: 126 DRANVSTLHYLRRIPSVLVTGQGFPPLAVRACVYRLAEALDLPVLGLVDCNPFGLSVFLQYKEGSSRQGRGSAKFGVPEMKWVGLRPSQLDDLDLPDEV 224
BLAST of mRNA_Ecto-sp13_S_contig1052.494.1 vs. uniprot
Match: A0A6H5KRW2_9PHAE (TP6A_N domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRW2_9PHAE) HSP 1 Score: 165 bits (417), Expect = 5.000e-49 Identity = 77/81 (95.06%), Postives = 81/81 (100.00%), Query Frame = 1
Query: 67 VTGQGFPPLAVRACVYRLAEALDLPVLGLVDCNPFGLSVFLQFKEGSSRQGRGSAKFRVPEMKWVGLRPSQLDDLNLPEEA 309
+TGQGFPPLAVRACVYRLAEALDLPVLGLVDCNPFGLSVFLQ+KEGSS+QGRGSAKFRVPEMKWVGLRPSQLDDL+LPEEA
Sbjct: 127 ITGQGFPPLAVRACVYRLAEALDLPVLGLVDCNPFGLSVFLQYKEGSSKQGRGSAKFRVPEMKWVGLRPSQLDDLDLPEEA 207
BLAST of mRNA_Ecto-sp13_S_contig1052.494.1 vs. uniprot
Match: A0A836CJS5_9STRA (Spo11/DNA topoisomerase VI subunit A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJS5_9STRA) HSP 1 Score: 107 bits (267), Expect = 2.150e-26 Identity = 52/97 (53.61%), Postives = 68/97 (70.10%), Query Frame = 1
Query: 19 AHVSPLHFLRRIPSVLVTGQGFPPLAVRACVYRLAEALDLPVLGLVDCNPFGLSVFLQFKEGSSRQGRGSAKFRVPEMKWVGLRPSQLDDLNLPEEA 309
A +S F R+P ++VTGQGFPP+AVRA V L AL+LP GLVDC PFGLS+ L + G +R G +A + ++KW+GLRPSQLD L+LP +A
Sbjct: 130 ARLSEDRFYDRLPCIIVTGQGFPPVAVRAMVRALQSALNLPAYGLVDCGPFGLSLLLTYVHGGARMGEQAAHYTA-DVKWLGLRPSQLDALDLPAQA 225
BLAST of mRNA_Ecto-sp13_S_contig1052.494.1 vs. uniprot
Match: D0MT30_PHYIT (TP6A_N domain-containing protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MT30_PHYIT) HSP 1 Score: 102 bits (253), Expect = 9.410e-24 Identity = 48/90 (53.33%), Postives = 64/90 (71.11%), Query Frame = 1
Query: 40 FLRRIPSVLVTGQGFPPLAVRACVYRLAEALDLPVLGLVDCNPFGLSVFLQFKEGSSRQGRGSAKFRVPEMKWVGLRPSQLDDLNLPEEA 309
F +PS+L+TG+GFP LA RA V L+ AL +PVLGL DCNPFGLS+ L +K GS+R S ++ V ++KWVG+RPSQ+ L LP +
Sbjct: 191 FFETVPSILITGRGFPDLATRAFVNLLSNALGIPVLGLCDCNPFGLSIMLTYKLGSARMPLDSLRYAV-DIKWVGVRPSQVSHLGLPTSS 279
BLAST of mRNA_Ecto-sp13_S_contig1052.494.1 vs. uniprot
Match: W2KQB5_PHYPR (TP6A_N domain-containing protein n=2 Tax=Phytophthora parasitica TaxID=4792 RepID=W2KQB5_PHYPR) HSP 1 Score: 101 bits (252), Expect = 2.310e-23 Identity = 48/87 (55.17%), Postives = 64/87 (73.56%), Query Frame = 1
Query: 40 FLRRIPSVLVTGQGFPPLAVRACVYRLAEALDLPVLGLVDCNPFGLSVFLQFKEGSSRQGRGSAKFRVPEMKWVGLRPSQLDDLNLP 300
F +PS+L+TG+GFP LA R V L AL++PVLGL DCNPFGLS+ L +K GS+R S ++ V ++KWVG+RPSQ+ DL+LP
Sbjct: 240 FFEIVPSILITGRGFPDLATRVFVSLLRSALEIPVLGLCDCNPFGLSIMLTYKLGSARMPLESLQYAV-DIKWVGVRPSQIADLDLP 325
BLAST of mRNA_Ecto-sp13_S_contig1052.494.1 vs. uniprot
Match: A0A2P4X7X3_9STRA (Topoisomerase acting in meiosis n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X7X3_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 3.570e-23 Identity = 47/90 (52.22%), Postives = 64/90 (71.11%), Query Frame = 1
Query: 40 FLRRIPSVLVTGQGFPPLAVRACVYRLAEALDLPVLGLVDCNPFGLSVFLQFKEGSSRQGRGSAKFRVPEMKWVGLRPSQLDDLNLPEEA 309
F +PSVL+TG+GFP LA R V L+ AL++PVLG+ DCNPFGLS+ L +K GS+R S ++ V ++KWVG+RPSQ+ L LP +
Sbjct: 145 FFEMVPSVLITGRGFPDLATRIFVSLLSRALEIPVLGICDCNPFGLSIMLTYKLGSARMPLESLQYAV-DIKWVGVRPSQIAGLGLPTSS 233
BLAST of mRNA_Ecto-sp13_S_contig1052.494.1 vs. uniprot
Match: G4ZQQ3_PHYSP (TP6A_N domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZQQ3_PHYSP) HSP 1 Score: 100 bits (249), Expect = 4.940e-23 Identity = 47/90 (52.22%), Postives = 65/90 (72.22%), Query Frame = 1
Query: 40 FLRRIPSVLVTGQGFPPLAVRACVYRLAEALDLPVLGLVDCNPFGLSVFLQFKEGSSRQGRGSAKFRVPEMKWVGLRPSQLDDLNLPEEA 309
F + +PS+L+TG+GFP LA R V L+ AL +PVLGL DCNPFGLS+ L +K GS+R S ++ V ++KWVG+RPSQ+ L LP+ +
Sbjct: 218 FYKMVPSILITGRGFPDLATRVFVSLLSHALKIPVLGLCDCNPFGLSIMLTYKLGSARMPLESLEYAV-DIKWVGVRPSQIAALGLPQSS 306
BLAST of mRNA_Ecto-sp13_S_contig1052.494.1 vs. uniprot
Match: W2PU68_PHYPN (Apple domain-containing protein n=6 Tax=Phytophthora parasitica TaxID=4792 RepID=W2PU68_PHYPN) HSP 1 Score: 101 bits (252), Expect = 5.050e-23 Identity = 48/87 (55.17%), Postives = 64/87 (73.56%), Query Frame = 1
Query: 40 FLRRIPSVLVTGQGFPPLAVRACVYRLAEALDLPVLGLVDCNPFGLSVFLQFKEGSSRQGRGSAKFRVPEMKWVGLRPSQLDDLNLP 300
F +PS+L+TG+GFP LA R V L AL++PVLGL DCNPFGLS+ L +K GS+R S ++ V ++KWVG+RPSQ+ DL+LP
Sbjct: 364 FFEIVPSILITGRGFPDLATRVFVSLLRNALEIPVLGLCDCNPFGLSIMLTYKLGSARMPLESLQYAV-DIKWVGVRPSQIADLDLP 449
BLAST of mRNA_Ecto-sp13_S_contig1052.494.1 vs. uniprot
Match: A0A7S2JQ12_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JQ12_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 8.250e-23 Identity = 45/92 (48.91%), Postives = 66/92 (71.74%), Query Frame = 1
Query: 40 FLRRIPSVLVTGQGFPPLAVRACVYRLAEALDLPVLGLVDCNPFGLSVFLQFKEGSSRQGRGSAKFRVPEMKWVGLRPSQLDDLN--LPEEA 309
F ++P +L+TG+GFP LA RACV+ L L++PV GL DCNPFG+SV + + GSS+ G + + VP +KW+GLRPS +++L+ LP+E
Sbjct: 203 FFDKVPCILITGKGFPDLASRACVFALHNMLNIPVYGLCDCNPFGVSVLMTYWRGSSKLGNDADSYSVP-VKWLGLRPSHIEELSPELPQEV 293
BLAST of mRNA_Ecto-sp13_S_contig1052.494.1 vs. uniprot
Match: A0A8K1C609_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C609_PYTOL) HSP 1 Score: 99.8 bits (247), Expect = 8.840e-23 Identity = 47/90 (52.22%), Postives = 66/90 (73.33%), Query Frame = 1
Query: 40 FLRRIPSVLVTGQGFPPLAVRACVYRLAEALDLPVLGLVDCNPFGLSVFLQFKEGSSRQGRGSAKFRVPEMKWVGLRPSQLDDLNLPEEA 309
F+ ++PS++VTG+GFP LA R V L+ L+LPV+GL DCNPFGLS+ L +K GS+R + F V ++KWVGLRPS+++ L+LP A
Sbjct: 211 FVDQLPSIIVTGRGFPDLATREFVSLLSRTLELPVIGLSDCNPFGLSIMLTYKLGSARMPLDTRPFGV-DIKWVGLRPSRIEQLDLPPTA 299 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1052.494.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1052.494.1 >prot_Ecto-sp13_S_contig1052.494.1 ID=prot_Ecto-sp13_S_contig1052.494.1|Name=mRNA_Ecto-sp13_S_contig1052.494.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=103bp MFLPNKAHVSPLHFLRRIPSVLVTGQGFPPLAVRACVYRLAEALDLPVLGback to top mRNA from alignment at Ecto-sp13_S_contig1052:10438..11131- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1052.494.1 ID=mRNA_Ecto-sp13_S_contig1052.494.1|Name=mRNA_Ecto-sp13_S_contig1052.494.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=694bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1052:10438..11131- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1052:10438..11131- >mRNA_Ecto-sp13_S_contig1052.494.1 ID=mRNA_Ecto-sp13_S_contig1052.494.1|Name=mRNA_Ecto-sp13_S_contig1052.494.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=309bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1052:10438..11131- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |