prot_Ecto-sp13_S_contig10487.463.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10487.463.1
Unique Nameprot_Ecto-sp13_S_contig10487.463.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length172
Homology
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BLAST of mRNA_Ecto-sp13_S_contig10487.463.1 vs. uniprot
Match: A0A6H5L6A0_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6A0_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 2.380e-18
Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = 0 
Query:  127 GLSKEGLMKLTVKDLRERCKAAGVPTSGRKADIVDRLLDAGLVA 170
            GLSKEGLMKLTVKDLRERCKAAGVPTSGRKADIVDRLLD+GLVA
Sbjct:  149 GLSKEGLMKLTVKDLRERCKAAGVPTSGRKADIVDRLLDSGLVA 192
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BLAST of mRNA_Ecto-sp13_S_contig10487.463.1 vs. uniprot
Match: A0A6V8D0I6_9ARCH (SAP domain-containing protein n=2 Tax=Candidatus Poseidoniales TaxID=133814 RepID=A0A6V8D0I6_9ARCH)

HSP 1 Score: 52.8 bits (125), Expect = 3.960e-6
Identity = 23/41 (56.10%), Postives = 31/41 (75.61%), Query Frame = 0 
Query:  127 GLSKEGLMKLTVKDLRERCKAAGVPTSGRKADIVDRLLDAG 167
            G S E L  L+V DL+ERCKAAG+P  G+KAD+++RL  +G
Sbjct:   45 GSSDEDLSSLSVADLKERCKAAGLPVGGKKADLIERLSTSG 85
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BLAST of mRNA_Ecto-sp13_S_contig10487.463.1 vs. uniprot
Match: A0A6V8CXL1_9ARCH (SAP domain-containing protein n=2 Tax=Candidatus Poseidoniales TaxID=133814 RepID=A0A6V8CXL1_9ARCH)

HSP 1 Score: 50.8 bits (120), Expect = 8.860e-5
Identity = 22/39 (56.41%), Postives = 30/39 (76.92%), Query Frame = 0 
Query:  129 SKEGLMKLTVKDLRERCKAAGVPTSGRKADIVDRLLDAG 167
            S E L  L+V DL+ERCKAAG+P  G+KAD+++RL  +G
Sbjct:  124 SDEDLSSLSVADLKERCKAAGLPVGGKKADLIERLSASG 162
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10487.463.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L6A0_9PHAE2.380e-1897.73SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6V8D0I6_9ARCH3.960e-656.10SAP domain-containing protein n=2 Tax=Candidatus P... [more]
A0A6V8CXL1_9ARCH8.860e-556.41SAP domain-containing protein n=2 Tax=Candidatus P... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 15..56
IPR003034SAP domainSMARTSM00513sap_9coord: 133..167
e-value: 1.7E-7
score: 40.9
IPR003034SAP domainPFAMPF02037SAPcoord: 133..166
e-value: 4.0E-11
score: 42.4
IPR003034SAP domainPROSITEPS50800SAPcoord: 133..167
score: 11.504
IPR036361SAP domain superfamilyGENE3D1.10.720.30coord: 126..168
e-value: 2.3E-10
score: 41.9
IPR036361SAP domain superfamilySUPERFAMILY68906SAP domaincoord: 129..165

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10487contigEcto-sp13_S_contig10487:1228..3090 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10487.463.1mRNA_Ecto-sp13_S_contig10487.463.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10487 720..3090 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10487.463.1 ID=prot_Ecto-sp13_S_contig10487.463.1|Name=mRNA_Ecto-sp13_S_contig10487.463.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=172bp
GAGAGTGVKKRQPKKETARQAALEAKERKASEEAEAKKARAAAAAAEREA
QKVKDIEVKKKIATAGAAASAAKPPPPPPPPHEGHQAASAKKTTRARGRA
APPATSKAKPAAAAAAGAAAGEGEGRGLSKEGLMKLTVKDLRERCKAAGV
PTSGRKADIVDRLLDAGLVAP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003034SAP_dom
IPR036361SAP_dom_sf