prot_Ecto-sp13_S_contig10475.452.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10475.452.1
Unique Nameprot_Ecto-sp13_S_contig10475.452.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length564
Homology
BLAST of mRNA_Ecto-sp13_S_contig10475.452.1 vs. uniprot
Match: D7FYZ4_ECTSI (Mago-bind domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYZ4_ECTSI)

HSP 1 Score: 679 bits (1751), Expect = 3.210e-239
Identity = 452/564 (80.14%), Postives = 465/564 (82.45%), Query Frame = 0
Query:    1 GFNSRSGGATRYVPPAFRTPTGGGDGGGPAAGHTRSLGEIDAGEGRRGTPRFLSAALFLLTAASGSPELFPRQPGVLGGAAAAEXXXXXXXXXXXXXXXADDVASGRDKSRSGADRTGGSNESGNDDPRQEAGSRDVE-SDNDWWTRLRLSQRSSRLARESSESEDPATTTKKEEEKPTGEDGAWVGLELRLRPSDVSYDEGQAATVDFLKGRVGDQVVSGEGREGAPQPAEDSQGPSARAEVEPPRALAAAKSPTRGXXXXXXXXXXXXXSNPEPERRAPEGVAASVSLPQQPEDXXXXXXXXXXXXXXXTVLVAVLVFGAELSKRDRAGLHGQAEKAGGVASASHGVGEGRFLALACRLGGRAGAVELELSPEKAELARSLFRLAQQEYHSRFECLSHREIREVVAEGGPTAEAHPDLFELLEKKQQPRQXXXXXXXXXXXXXXXTDRLNNTAKKAAGDETGATGAFSRASSGGSSGKRGATATVTGEATRQXXXXXXXXXXXXDCGVKPAALPLQEGVNCASGEGGADSPPRGEGLEERELAEQGREVGNKPFLLVEKCPW 563
            GFNSRSGGATRYVPPAFRTPTGGGDGGGPAAGHTRSLGEI+A EGRRGTPRFL AALFLLTAASGSPEL PRQPG LG A AA                  DVASGRDKSRSGADRTGGS ESGNDD RQEAGSRD+  SD+DWWTRLRLSQRSSRLARESSESEDPATTTKKE+ KPTGEDGAWVGLELRLRPSDVSYDEGQAA VDFLKGRVGDQ V GEGREGAPQPAEDS+GPSARAEVEPP            XXXXXXXXXXXXX                         XXXXXXXXXXXXXXXTVLVAVLVFGAELSKRDRAGLH QAEKAGGVA++SHGVGEGRFLALACRLGG AGAVELELSPEKAELARSLFRLAQQEYHSRFECLSHREIREVVAEGGPTAEAHPDLF+LLEKKQQPRQXXXXXXXX       TDRL+NTAKKAAGDE  AT AF RASS GS G+RGATATVT +AT+ XXXXXXXXXXXX    KPAALPLQE  NCA G   ADSPPRGE LEERELAEQGRE GN+PFL VEKCPW
Sbjct:   21 GFNSRSGGATRYVPPAFRTPTGGGDGGGPAAGHTRSLGEINADEGRRGTPRFLGAALFLLTAASGSPELSPRQPGGLGDAEAAADPAAAGGGG--------DVASGRDKSRSGADRTGGSTESGNDDRRQEAGSRDIGMSDDDWWTRLRLSQRSSRLARESSESEDPATTTKKEKGKPTGEDGAWVGLELRLRPSDVSYDEGQAAIVDFLKGRVGDQAVPGEGREGAPQPAEDSRGPSARAEVEPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVLVAVLVFGAELSKRDRAGLHSQAEKAGGVANSSHGVGEGRFLALACRLGGNAGAVELELSPEKAELARSLFRLAQQEYHSRFECLSHREIREVVAEGGPTAEAHPDLFKLLEKKQQPRQXXXXXXXXPDVGC--TDRLDNTAKKAAGDEPEATEAFFRASSQGSFGERGATATVTEDATQXXXXXXXXXXXXXXXXAKPAALPLQESENCAKG--AADSPPRGEDLEERELAEQGREGGNEPFLPVEKCPW 566          
BLAST of mRNA_Ecto-sp13_S_contig10475.452.1 vs. uniprot
Match: A0A6H5K144_9PHAE (Mago-bind domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K144_9PHAE)

HSP 1 Score: 560 bits (1443), Expect = 7.040e-193
Identity = 370/499 (74.15%), Postives = 377/499 (75.55%), Query Frame = 0
Query:    1 GFNSRSGGATRYVPPAFRTPTGGGDGGGPAAGHTRSLGEIDAGEGRRGTPRFLSAALFLLTAASGSPE----------------------------------------------------LFPRQPGVLGGAAAAEXXXXXXXXXXXXXXXADDVASGRDKSRSGADRTGGSNESGNDDPRQEAGSRDVE-SDNDWWTRLRLSQRSSRLARESSESEDPATTTKKEEE-KPTGEDGAWVGLELRLRPSDVSYDEGQAATVDFLKGRVGDQVVSGEGREGAPQPAEDSQGPSARAEVEPPRALAAAKSPT-RGXXXXXXXXXXXXXSNPEPERRAPEGVAAS-------------VSLPQQPEDXXXXXXXXXXXXXXXTVLVAVLVFGAELSKRDRAGLHGQAEKAGGVASASHGVGEGRFLALACRLGGRAGAVELELSPEKAELARSLFRLAQQEYHSRFECLSHREIREVVAEGGPTAEAHPDLFELLEKKQQPRQ 431
            GF+S SGGATRYVPPAFRTPTGGGDGG PAAGHTRSLGEIDAGEGRR TPRFLSAALFLLTAASGS E                                                    L PRQPG LG AAAAE         XXX     DVASGRDKSRSGADRTGGSNESGNDDPRQE GSRD+  SD+DWWTRLRL QRSSRLARESSESED A         KP GEDGAWVGLELRLRPSDVS+DEGQAA VDFLKGRVGDQ V G GREGAPQPAEDS+GPSARAEVEPPRA AAAKSPT   XXXXXXXXX    SNPE ERRAPEG                 VSLPQQPE XXXXXXXXXXXXX  TVLVAVLVFGAELSKRDRAGLHGQAEKAGGV SASHGVGEGRFLALACRLGGRAGAVELELSPEKAELARSLFRLAQQEYHSRFECLSHREIREVVAEGGPTA+AHPDLF+LLEKKQQPRQ
Sbjct:   21 GFSSTSGGATRYVPPAFRTPTGGGDGGHPAAGHTRSLGEIDAGEGRRSTPRFLSAALFLLTAASGSAETRRVGGGQGQEEETGGSGAFETDRRRVAVLSLPLRSAALAAQEHLECESFRQLSPRQPGGLGDAAAAEATPDPTAAAXXXA----DVASGRDKSRSGADRTGGSNESGNDDPRQEPGSRDIGMSDDDWWTRLRLFQRSSRLARESSESEDRAXXXXXXXXXKPIGEDGAWVGLELRLRPSDVSHDEGQAAIVDFLKGRVGDQAVPGGGREGAPQPAEDSRGPSARAEVEPPRAPAAAKSPTGXXXXXXXXXXXRELDSNPEHERRAPEGXXXXXXXXXXXXXXXXXVSLPQQPEXXXXXXXXXXXXXXASTVLVAVLVFGAELSKRDRAGLHGQAEKAGGVTSASHGVGEGRFLALACRLGGRAGAVELELSPEKAELARSLFRLAQQEYHSRFECLSHREIREVVAEGGPTADAHPDLFKLLEKKQQPRQ 515          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10475.452.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FYZ4_ECTSI3.210e-23980.14Mago-bind domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K144_9PHAE7.040e-19374.15Mago-bind domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10475contigEcto-sp13_S_contig10475:2011..4880 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10475.452.1mRNA_Ecto-sp13_S_contig10475.452.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10475 1497..4880 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10475.452.1 ID=prot_Ecto-sp13_S_contig10475.452.1|Name=mRNA_Ecto-sp13_S_contig10475.452.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=564bp
GFNSRSGGATRYVPPAFRTPTGGGDGGGPAAGHTRSLGEIDAGEGRRGTP
RFLSAALFLLTAASGSPELFPRQPGVLGGAAAAEAAADPAGAGAGAGAGA
DDVASGRDKSRSGADRTGGSNESGNDDPRQEAGSRDVESDNDWWTRLRLS
QRSSRLARESSESEDPATTTKKEEEKPTGEDGAWVGLELRLRPSDVSYDE
GQAATVDFLKGRVGDQVVSGEGREGAPQPAEDSQGPSARAEVEPPRALAA
AKSPTRGEGEGGGGGPRELESNPEPERRAPEGVAASVSLPQQPEDDDHLR
RAKGGGGGASTVLVAVLVFGAELSKRDRAGLHGQAEKAGGVASASHGVGE
GRFLALACRLGGRAGAVELELSPEKAELARSLFRLAQQEYHSRFECLSHR
EIREVVAEGGPTAEAHPDLFELLEKKQQPRQRQGQGQRQRQPDCDCTDRL
NNTAKKAAGDETGATGAFSRASSGGSSGKRGATATVTGEATRQQEHHQCG
GGGGGDCGVKPAALPLQEGVNCASGEGGADSPPRGEGLEERELAEQGREV
GNKPFLLVEKCPW*
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