prot_Ecto-sp13_S_contig10472.451.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10472.451.1
Unique Nameprot_Ecto-sp13_S_contig10472.451.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length203
Homology
BLAST of mRNA_Ecto-sp13_S_contig10472.451.1 vs. uniprot
Match: A0A6H5JP85_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP85_9PHAE)

HSP 1 Score: 395 bits (1015), Expect = 4.160e-133
Identity = 191/201 (95.02%), Postives = 193/201 (96.02%), Query Frame = 0
Query:    2 THVLDLLGPIIDPIGYRLDLSPYFDEEDIPYMGKANAMDGPRNMALNIFCYSVVFFVFQVHPSVALKLSMVYYGARVVTDYVVLVTEPARRKLGQMTIVHTPWSAVIHAGLTILGYCCHRNVLYTAEIPGLHPLAVGPGAVGLVEPFVRFAVKISEILSHIEFFKCKFVEDPAEMVKHMTGRSKVSAGPVEFIKNLVRRGE 202
            THVLDL GPIIDPIGYRLDLSPYFDEEDIPYMGKANAMDGPRNMALNIFCYSVVF VFQVHPSVALKLSMVYYGARVVTDYVVLVTEPARRKLGQMTIVHTPWSAVIHAGLTILGYCCHRNVLYTAE+PGLHPLAVGPGAVGLVEP VRFAVKISEILSHIEFFKCKFVEDP EMVKHMTG  KVS GPVEF+K LVRRGE
Sbjct:  412 THVLDLFGPIIDPIGYRLDLSPYFDEEDIPYMGKANAMDGPRNMALNIFCYSVVFIVFQVHPSVALKLSMVYYGARVVTDYVVLVTEPARRKLGQMTIVHTPWSAVIHAGLTILGYCCHRNVLYTAEVPGLHPLAVGPGAVGLVEPVVRFAVKISEILSHIEFFKCKFVEDPVEMVKHMTGHRKVSVGPVEFLKKLVRRGE 612          
BLAST of mRNA_Ecto-sp13_S_contig10472.451.1 vs. uniprot
Match: D8LTP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTP1_ECTSI)

HSP 1 Score: 372 bits (954), Expect = 1.100e-126
Identity = 180/202 (89.11%), Postives = 188/202 (93.07%), Query Frame = 0
Query:    1 QTHVLDLLGPIIDPIGYRLDLSPYFDEEDIPYMGKANAMDGPRNMALNIFCYSVVFFVFQVHPSVALKLSMVYYGARVVTDYVVLVTEPARRKLGQMTIVHTPWSAVIHAGLTILGYCCHRNVLYTAEIPGLHPLAVGPGAVGLVEPFVRFAVKISEILSHIEFFKCKFVEDPAEMVKHMTGRSKVSAGPVEFIKNLVRRGE 202
            +THVLDL GPIIDPIGYRLDLSPYFDEEDIPYMGKANAM GPRNMALNI CYSVVF VF+VHPSVALKLSMVYYG RVVTDYVVL TEPARRKLGQMTIVHTPWSAVIHAGLTILGY CHR+ LYTAEIPGLHPLAVGPGAVGLVEP VRFAVKISEILS IEFF+CKFV+DP +MVKHMTGR KVS GPVEF+KNL+ RGE
Sbjct:  204 KTHVLDLFGPIIDPIGYRLDLSPYFDEEDIPYMGKANAMGGPRNMALNILCYSVVFAVFRVHPSVALKLSMVYYGGRVVTDYVVLFTEPARRKLGQMTIVHTPWSAVIHAGLTILGYYCHRSALYTAEIPGLHPLAVGPGAVGLVEPVVRFAVKISEILSDIEFFRCKFVQDPVQMVKHMTGRRKVSVGPVEFLKNLLSRGE 405          
BLAST of mRNA_Ecto-sp13_S_contig10472.451.1 vs. uniprot
Match: A0A6H5JS93_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS93_9PHAE)

HSP 1 Score: 251 bits (642), Expect = 1.590e-81
Identity = 113/170 (66.47%), Postives = 141/170 (82.94%), Query Frame = 0
Query:    1 QTHVLDLLGPIIDPIGYRLDLSPYFDEEDIPYMGKANAMDGPRNMALNIFCYSVVFFVFQVHPSVALKLSMVYYGARVVTDYVVLVTEPARRKLGQMTIVHTPWSAVIHAGLTILGYCCHRNVLYTAEIPGLHPLAVGPGAVGLVEPFVRFAVKISEILSHIEFFKCKFV 170
            +TH+LDL GP++DPIGYRLDL+ Y+DEE+IPYMG ANAMDGP N+A+NIFCY++VF V + HP ++LK++M+Y+GARVVTDY+V+V EP RRKLG MT VHTPWS +I AGLT+LG+  HR+ L+TA + G HPL VGPGAVGLVEP VR AV +SE+L  IEFF   FV
Sbjct:   76 KTHLLDLFGPMVDPIGYRLDLTTYYDEEEIPYMGNANAMDGPHNLAMNIFCYALVFVVIRAHPPLSLKMAMIYFGARVVTDYLVMVAEPIRRKLGLMTAVHTPWSGLIQAGLTVLGFSYHRHTLHTASVTGFHPLVVGPGAVGLVEPLVRVAVWVSEVLHRIEFFTVNFV 245          
BLAST of mRNA_Ecto-sp13_S_contig10472.451.1 vs. uniprot
Match: D8LTP3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTP3_ECTSI)

HSP 1 Score: 243 bits (621), Expect = 1.540e-76
Identity = 111/170 (65.29%), Postives = 136/170 (80.00%), Query Frame = 0
Query:    1 QTHVLDLLGPIIDPIGYRLDLSPYFDEEDIPYMGKANAMDGPRNMALNIFCYSVVFFVFQVHPSVALKLSMVYYGARVVTDYVVLVTEPARRKLGQMTIVHTPWSAVIHAGLTILGYCCHRNVLYTAEIPGLHPLAVGPGAVGLVEPFVRFAVKISEILSHIEFFKCKFV 170
            +TH+LDL GP++DPIGYRLDL+ Y+DE +IPYMG  NAMDGP N+A+NIFCY++VF V + HP +ALK +MVY+GARVVTDY+V+  EP RRKLG MT VHTPWS +I AGLT+LG+  HR+ L+TA + G HPL VGPG VGLVEP VR AV +SE+L  IEFF   FV
Sbjct:  211 KTHLLDLFGPMLDPIGYRLDLTTYYDEAEIPYMGNPNAMDGPHNLAMNIFCYALVFAVIRAHPPLALKTAMVYFGARVVTDYLVMTAEPIRRKLGLMTAVHTPWSGMIQAGLTVLGFYYHRHTLHTASVTGFHPLVVGPGVVGLVEPLVRVAVWVSEVLHRIEFFTVNFV 380          
BLAST of mRNA_Ecto-sp13_S_contig10472.451.1 vs. uniprot
Match: D7FJ41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ41_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 2.680e-15
Identity = 61/164 (37.20%), Postives = 85/164 (51.83%), Query Frame = 0
Query:    4 VLDLLGPIIDPIGYRLDLSPYFDEEDIPYMGKANAMDGPRNMALNIFCY---SVVFFVFQVHPSVALKLSMVYYGARVVTDYVVLVTEPARRKLGQMT-IVHTPWSAVIHAGLTILGYCCHRNVLYTAEIPGLHPLAVGPGAVGLVEPFVRFAVKISEILSHIE 163
            + DLLGP+IDPIGY+++L  Y           AN M GP N+ + +  Y   + VFF F V P  AL ++ V  GARVVTDY+V    P R + G    + + P SAVI+  L  LG+  H N        GL    VG  A    +PF+ F   +++ L+H +
Sbjct:  288 LFDLLGPVIDPIGYQIELETYV----------ANIMRGPANLYITLAGYVSSASVFFHFFVDPQQALTITFVLLGARVVTDYIVAALNPVRWRFGMSKKLDNMPISAVIYLLLASLGFIFHGNA-------GL----VGDFA---CKPFIAFLGLLNKGLNHFQ 427          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10472.451.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JP85_9PHAE4.160e-13395.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTP1_ECTSI1.100e-12689.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JS93_9PHAE1.590e-8166.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTP3_ECTSI1.540e-7665.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FJ41_ECTSI2.680e-1537.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..44
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..67
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 68..202
NoneNo IPR availableTMHMMTMhelixcoord: 45..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10472contigEcto-sp13_S_contig10472:2017..5464 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10472.451.1mRNA_Ecto-sp13_S_contig10472.451.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10472 2017..5464 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10472.451.1 ID=prot_Ecto-sp13_S_contig10472.451.1|Name=mRNA_Ecto-sp13_S_contig10472.451.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=203bp
QTHVLDLLGPIIDPIGYRLDLSPYFDEEDIPYMGKANAMDGPRNMALNIF
CYSVVFFVFQVHPSVALKLSMVYYGARVVTDYVVLVTEPARRKLGQMTIV
HTPWSAVIHAGLTILGYCCHRNVLYTAEIPGLHPLAVGPGAVGLVEPFVR
FAVKISEILSHIEFFKCKFVEDPAEMVKHMTGRSKVSAGPVEFIKNLVRR
GE*
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