prot_Ecto-sp13_S_contig10445.425.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10445.425.1
Unique Nameprot_Ecto-sp13_S_contig10445.425.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length233
Homology
BLAST of mRNA_Ecto-sp13_S_contig10445.425.1 vs. uniprot
Match: D7FJQ1_ECTSI (IFT27, Ras superfamily GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJQ1_ECTSI)

HSP 1 Score: 426 bits (1095), Expect = 2.620e-150
Identity = 216/232 (93.10%), Postives = 222/232 (95.69%), Query Frame = 0
Query:    1 MSRADTSLSASIAAPSQSGVRSMQTSHRTTLMLRAKVVVVGDACVGKSSVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKVPETDSVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPSTSAPLPGVVIANKSDLREGGINARAVVETKASTLFEGQLFALQNGLDYFETSAAGAKDIDAPFHHMASRFHETYEKTIEGAEGEGGLP 232
            MSRADT LS S+AAPSQSGVRSMQT+HRTTLMLRAKVVVVGDACVGK+SVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKVPETD VVELFLFDCPGQGVFNKLEQGAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALP+TSAPLPGVVIANKSDLREGGINARAVVETK     EG+LFALQNGLDYFETSAAGAK IDAPFHHMA+ FHETYEKTIEGAEGEGGLP
Sbjct:    1 MSRADTILSGSVAAPSQSGVRSMQTTHRTTLMLRAKVVVVGDACVGKTSVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKVPETDCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPTTSAPLPGVVIANKSDLREGGINARAVVETK-----EGRLFALQNGLDYFETSAAGAKGIDAPFHHMATSFHETYEKTIEGAEGEGGLP 227          
BLAST of mRNA_Ecto-sp13_S_contig10445.425.1 vs. uniprot
Match: A0A6H5KZL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZL0_9PHAE)

HSP 1 Score: 327 bits (837), Expect = 3.830e-111
Identity = 166/175 (94.86%), Postives = 170/175 (97.14%), Query Frame = 0
Query:    1 MSRADTSLSASIAAPSQSGVRSMQTSHRTTLMLRAKVVVVGDACVGKSSVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKVPETDSVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPSTSAPLPGVVIANKSDLREGGINARAVVETKA 175
            MSRADT LS S+AAPSQSGVRSMQT+HRTTLMLRAKVVVVGDACVGK+SVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKVPETD VVELFLFDCPGQGVFNKLEQGAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPS SAPLPGVVIANKSDLREGGINARAVV T+A
Sbjct:    1 MSRADTILSGSVAAPSQSGVRSMQTTHRTTLMLRAKVVVVGDACVGKTSVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKVPETDCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPSKSAPLPGVVIANKSDLREGGINARAVVGTEA 175          
BLAST of mRNA_Ecto-sp13_S_contig10445.425.1 vs. uniprot
Match: A0A7S2XVJ0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVJ0_9STRA)

HSP 1 Score: 254 bits (648), Expect = 3.470e-82
Identity = 123/214 (57.48%), Postives = 165/214 (77.10%), Query Frame = 0
Query:   17 QSGVRSMQTSHRTTLMLRAKVVVVGDACVGKSSVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKVPETDSVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPSTSAPLPGVVIANKSDLREGGINARAVVETKASTLFEGQLFALQNGLDYFETSAAGAKDIDAPFHHMASRFHETYEKTIEGAEGEGG 230
            +S +RSM+++H+  LMLR KVV+VGDACVGKS++VQMF  GG  YPKNY+MT GV F VKQV +P+T+  VEL+LFDC GQ +FN+ EQ    +EN ++V VV+DV NRDSF+SC +WLQGVR+   S+   +PGV++ANKSDLREGGIN+RA V  +     EG+ FA +N L++FETSAA AK++DAPF+ +AS+FH+ YE+T++ AE   G
Sbjct:   26 KSALRSMESAHKPLLMLRCKVVLVGDACVGKSALVQMFHGGGQRYPKNYVMTTGVGFCVKQVNIPDTNCAVELYLFDCAGQSIFNQREQNLKSWENTSYVVVVYDVGNRDSFQSCAKWLQGVRSTRQSSM--IPGVLVANKSDLREGGINSRAAVSDE-----EGRNFAQENSLEFFETSAAEAKNVDAPFNFIASQFHQKYEQTVQRAEALSG 232          
BLAST of mRNA_Ecto-sp13_S_contig10445.425.1 vs. uniprot
Match: A0A835ZCC9_9STRA (IFT27, ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCC9_9STRA)

HSP 1 Score: 250 bits (639), Expect = 2.980e-81
Identity = 123/209 (58.85%), Postives = 159/209 (76.08%), Query Frame = 0
Query:   23 MQTSHRTTLMLRAKVVVVGDACVGKSSVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKVPETDSVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPSTSAPLPGVVIANKSDLREGGINARAVVETKASTLFEGQLFALQNGLDYFETSAAGAKDIDAPFHHMASRFHETYEKTIEGAEGEGGL 231
            M+  H+  LMLR+KVV+VGDA VGK+++ QM  S GH+YPKNY+MT  VDF VKQ+++PE +  VELFLFDC GQGVFNKL+  A +++NA+FVCVVFDV NR+SF+SCGRWLQGVRA  P T+AP+PGV+I +K+DLREG   +RAVV+ +     EG  FA +NGL YFE SAA +  ++APF HMA +FH  YE ++  AEG  G+
Sbjct:    1 MEAQHKPLLMLRSKVVIVGDAYVGKTAITQMLISSGHNYPKNYLMTTDVDFSVKQIRLPEVNCCVELFLFDCAGQGVFNKLDLNAVHWDNASFVCVVFDVCNRESFQSCGRWLQGVRATRP-TAAPMPGVLIGSKADLREG---SRAVVDAQ-----EGARFAQENGLAYFEVSAAMSSGVEAPFQHMAQQFHTMYEASMRKAEGLAGV 200          
BLAST of mRNA_Ecto-sp13_S_contig10445.425.1 vs. uniprot
Match: A0A7S3JRK5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JRK5_9STRA)

HSP 1 Score: 220 bits (561), Expect = 2.580e-69
Identity = 118/210 (56.19%), Postives = 147/210 (70.00%), Query Frame = 0
Query:   17 QSGVRSMQTSHRTTLMLRAKVVVVGDACVGKSSVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKVPETDSVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPSTSAPLPGVVIANKSDLREGGINARAVVETKASTLFEGQLFALQNGLDYFETSAAGAKDIDAPFHHMASRFHETYEKTIEGAE 226
            QS VRSM++ HR+ LMLR KVVVVGDA VGKS+++ MF SGG  +PK Y+MT  VDF VKQV +PE+ + VEL+LFDC GQ +FN++E   A+YENA+F+C+V+DVSN  SFESCG+WLQ V  + PS    LPGV+IANK DL  GG   R VV T+     +GQ FA  N L YFETSA    + D PF H+A  F + YE TI  A+
Sbjct:   12 QSAVRSMESGHRSILMLRCKVVVVGDAAVGKSALISMFHSGGSSFPKQYLMTAWVDFRVKQVSIPESSTAVELYLFDCGGQSIFNQIEANNAHYENASFLCLVYDVSNASSFESCGKWLQMVSKSRPS----LPGVLIANKKDL--GGELGRRVVSTQ-----KGQEFASANNLAYFETSALEG-EFDEPFRHIAIEFAKKYEDTIAHAQ 209          
BLAST of mRNA_Ecto-sp13_S_contig10445.425.1 vs. uniprot
Match: A0A7S3M1Q0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M1Q0_9STRA)

HSP 1 Score: 219 bits (558), Expect = 6.890e-69
Identity = 105/213 (49.30%), Postives = 154/213 (72.30%), Query Frame = 0
Query:   17 QSGVRSMQTSHRTTLMLRAKVVVVGDACVGKSSVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKVPETDSVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPSTSAPLPGVVIANKSDLREGGINARAVVETKASTLFEGQLFALQNGLDYFETSAAGAKDIDAPFHHMASRFHETYEKTIEGAEGEG 229
            QSG+RSM+TSH+T ++LR K+++VGDACVGK+++ Q F SGG  YPKNY+MTIG +F VKQV +PET+ +VELF++DC GQ +FN+L+  + YYENA+ V VV++V+NRDS  SC +W+ GV+A + ++  PL G  + NK + R+G I++RA V+     + E +  A   G+ YFETSAA    +DAPF ++A  F+  YE+T++   G+G
Sbjct:    2 QSGLRSMETSHKTMVILRCKLILVGDACVGKTALTQSFVSGGTTYPKNYLMTIGAEFNVKQVTIPETNVIVELFIYDCAGQSIFNQLDLNSKYYENASAVMVVYNVANRDSLLSCNKWVSGVKA-IQNSGVPLVGAFVGNKCEFRDGSIDSRAEVD-----ILEAKETAESLGMTYFETSAANNIGVDAPFQYIAEEFYRRYEETVQ-TTGQG 207          
BLAST of mRNA_Ecto-sp13_S_contig10445.425.1 vs. uniprot
Match: A0A7S0SQ35_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SQ35_9STRA)

HSP 1 Score: 211 bits (537), Expect = 1.810e-65
Identity = 101/209 (48.33%), Postives = 151/209 (72.25%), Query Frame = 0
Query:   18 SGVRSMQTSHRTTLMLRAKVVVVGDACVGKSSVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKVPETDSVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPSTSAPLPGVVIANKSDLREGGINARAVVETKASTLFEGQLFALQNGLDYFETSAAGAKDIDAPFHHMASRFHETYEKTIEGAE 226
            SG+RSM + H++  +LR K+V++GD+CVGKSS++Q+F+SGG  YPKNY+MTIG DF VKQV +P+T+ VVEL++FDC GQ +FN+LE  + YYENAA V VV+D+ N+++ +S  +WL G+++A+ S  + L GV++ NKSD R+G +++RA V  +     + Q F+   GL YFE SAA    +  PF H+A+ F++ YE T+  A+
Sbjct:   14 SGIRSMDSKHKSLTVLRCKLVIIGDSCVGKSSLLQVFQSGGTTYPKNYMMTIGADFNVKQVPIPDTNIVVELYIFDCAGQPIFNQLEMNSKYYENAAAVMVVYDIGNQETLQSTTKWLTGLKSAV-SNPSDLIGVLVGNKSDYRDGSVDSRAEVVKE-----DAQRFSKDLGLAYFEASAASNIGVTEPFLHVATEFYKKYEDTLRKAD 216          
BLAST of mRNA_Ecto-sp13_S_contig10445.425.1 vs. uniprot
Match: A0A8J2SZ95_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SZ95_9STRA)

HSP 1 Score: 206 bits (524), Expect = 1.580e-63
Identity = 110/212 (51.89%), Postives = 144/212 (67.92%), Query Frame = 0
Query:   15 PSQSGVRSMQTSHRTTLMLRAKVVVVGDACVGKSSVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKVPETDSVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPSTSAPLPGVVIANKSDLREGGINARAVVETKASTLFEGQLFALQNGLDYFETSAAGAKDIDAPFHHMASRFHETYEKTIEGAE 226
            P +S +RSM+T+HRT LMLR KVVVVGDA VGKS+++ MF SGG  YPK Y+MT  VDF VKQV +P+T + VEL+LFDC G  VFN++E+ A+ Y+ A F+ VV+DV+  DSF SC +W+QGVR         LPGV++ANK DL E     R VV+ +      G+ FA +NGL YFETSA    + + PF H+A  F + YE+T+  AE
Sbjct:   24 PMESCLRSMETTHRTILMLRCKVVVVGDATVGKSALISMFHSGGASYPKQYVMTSWVDFRVKQVDIPDTSTAVELYLFDCAGDPVFNQVEENASQYDQAGFLFVVYDVTKEDSFASCAKWIQGVRKGREDR---LPGVLVANKIDLEE-----RRVVDEQ-----RGRDFAKENGLVYFETSALQG-NYEGPFRHVAMEFAKKYEETVARAE 221          
BLAST of mRNA_Ecto-sp13_S_contig10445.425.1 vs. uniprot
Match: A0A7S2RIT4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RIT4_9STRA)

HSP 1 Score: 201 bits (512), Expect = 1.990e-61
Identity = 105/210 (50.00%), Postives = 141/210 (67.14%), Query Frame = 0
Query:   18 SGVRSMQTSHRTTLMLRAKVVVVGDACVGKSSVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKVPETDSVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPSTSAPLPGVVIANKSDLRE-GGINARAVVETKASTLFEGQLFALQNGLDYFETSAAGAKDIDAPFHHMASRFHETYEKTIEGAE 226
            SG+RSM+TSHR  LMLR KV VVGDACVGK+++V++F    + YPKNY MT    F VKQV + +T + VEL+LFDC GQ VF+  E   + +EN AFV  V+DVSN++SF+S   WL  VR+  P  + PLPG+++ANK DLRE     +RAVV T+     +G+  A   GL++ E SAA   D D PFH++A  FH+ Y++T+  AE
Sbjct:   35 SGLRSMETSHRPLLMLRCKVAVVGDACVGKTALVELFHK--NKYPKNYQMTSWTSFCVKQVNIKDTSAAVELYLFDCGGQSVFSATEANHSLFENTAFVMCVYDVSNKESFDSVRTWLSKVRSRRPPNTPPLPGIIVANKIDLREEDDFMSRAVVTTE-----QGEALAKAEGLEFCEVSAAQQLDHDKPFHYIAEEFHKKYQETVRRAE 237          
BLAST of mRNA_Ecto-sp13_S_contig10445.425.1 vs. uniprot
Match: A0A0N7L680_PLAHL (Intraflagellar transport protein 27 homolog n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L680_PLAHL)

HSP 1 Score: 199 bits (507), Expect = 2.760e-61
Identity = 97/208 (46.63%), Postives = 146/208 (70.19%), Query Frame = 0
Query:   18 SGVRSMQTSHRTTLMLRAKVVVVGDACVGKSSVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKVPETDSVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPSTSAPLPGVVIANKSDLREGGINARAVVETKASTLFEGQLFALQNGLDYFETSAAGAKDIDAPFHHMASRFHETYEKTIEGA 225
            SG+RSM+T+H++T +LR KV +VG+A VGK++VVQ+ KS GH++PKNY+MT  V+   K + +P+T+ VVEL+LFDC GQ +FN+L+ G  +Y+ A+   VVFDV+N++SF+SC +W Q VR A P+ +  +PGV++ANK+DLR    N R  + TK     E + FA +N + +FE SA     ++APF ++A  FH+ Y+ T + A
Sbjct:    2 SGLRSMETTHKSTTVLRCKVAIVGEATVGKTAVVQILKSNGHEFPKNYVMTSDVELSTKSISIPDTNVVVELYLFDCAGQSIFNQLDFGTVHYKGASIALVVFDVNNKESFKSCSKWYQDVRDASPNHN--IPGVLLANKTDLR---YNNRDAISTK-----EAEEFAKRNDMKFFECSAQQNAGVEAPFVYIADWFHKKYQATTQRA 199          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10445.425.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJQ1_ECTSI2.620e-15093.10IFT27, Ras superfamily GTPase n=1 Tax=Ectocarpus s... [more]
A0A6H5KZL0_9PHAE3.830e-11194.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2XVJ0_9STRA3.470e-8257.48Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835ZCC9_9STRA2.980e-8158.85IFT27, ras superfamily GTPase n=1 Tax=Tribonema mi... [more]
A0A7S3JRK5_9STRA2.580e-6956.19Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S3M1Q0_9STRA6.890e-6949.30Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S0SQ35_9STRA1.810e-6548.33Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A8J2SZ95_9STRA1.580e-6351.89Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2RIT4_9STRA1.990e-6150.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A0N7L680_PLAHL2.760e-6146.63Intraflagellar transport protein 27 homolog n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 80..102
score: 24.41
coord: 192..214
score: 26.89
coord: 35..56
score: 39.56
coord: 60..76
score: 30.59
coord: 147..160
score: 34.56
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 35..217
e-value: 1.5E-16
score: 71.0
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 37..218
e-value: 1.4E-5
score: -46.3
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 32..217
e-value: 3.1E-6
score: -20.8
NoneNo IPR availableGENE3D3.40.50.300coord: 17..226
e-value: 3.8E-44
score: 152.2
NoneNo IPR availablePANTHERPTHR24070:SF414GTP-BINDING PROTEIN RAY-LIKE ISOFORM 2-RELATEDcoord: 32..223
NoneNo IPR availablePROSITEPS51419RABcoord: 24..232
score: 18.335
IPR001806Small GTPasePFAMPF00071Rascoord: 36..213
e-value: 7.2E-32
score: 110.2
IPR020849Small GTPase superfamily, Ras-typePANTHERPTHR24070FAMILY NOT NAMEDcoord: 32..223
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 35..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10445contigEcto-sp13_S_contig10445:2089..5698 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10445.425.1mRNA_Ecto-sp13_S_contig10445.425.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10445 1809..5796 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10445.425.1 ID=prot_Ecto-sp13_S_contig10445.425.1|Name=mRNA_Ecto-sp13_S_contig10445.425.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=233bp
MSRADTSLSASIAAPSQSGVRSMQTSHRTTLMLRAKVVVVGDACVGKSSV
VQMFKSGGHDYPKNYIMTIGVDFGVKQVKVPETDSVVELFLFDCPGQGVF
NKLEQGAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPSTSAPLP
GVVIANKSDLREGGINARAVVETKASTLFEGQLFALQNGLDYFETSAAGA
KDIDAPFHHMASRFHETYEKTIEGAEGEGGLP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR020849Small_GTPase_Ras-type
IPR027417P-loop_NTPase