prot_Ecto-sp13_S_contig10425.408.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig10425.408.1
Unique Name	prot_Ecto-sp13_S_contig10425.408.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	418

Homology

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BLAST of mRNA_Ecto-sp13_S_contig10425.408.1 vs. uniprot
Match: D7FHH9_ECTSI (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH9_ECTSI)

HSP 1 Score: 422 bits (1085), Expect = 3.010e-140
Identity = 260/283 (91.87%), Postives = 262/283 (92.58%), Query Frame = 0

Query:    1 DESPLRDRPEEEKVALRLGALDKVSLEADERTELEREKQARWQKTARSNAVVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTRHEIHPMFGTCRAEICRDHITGDSLNYAFVEFEAIESCEEAFKKMNNVLIDDRRIRVDFSQSVAKEWSKYKGRAQGGQKLSSGKGGKPAQQPQQNNTQRDHHASGGGRGAVDQHRKSKWGNAPVSGGVAHAVGKPPSENRRGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRGGRGDRRD 283
            DESPLRDRPEEEKVALRLGALDKVSLEADERTELEREKQ R +KTARSNAVVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTR      FGTCRAEICRDHITGDSLNYAFVEFEAIESCEEAFKKMNNVLIDDRRIRVDFSQSVAKEWSKYKGRAQGGQKL+SGKGGKPAQQPQQNNTQRD HASGGG GA  QHRKSKWGNAPVSGGVAH VGKPPSENRRGGD        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRGGRGDRRD
Sbjct:  190 DESPLRDRPEEEKVALRLGALDKVSLEADERTELEREKQLR-EKTARSNAVVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTR------FGTCRAEICRDHITGDSLNYAFVEFEAIESCEEAFKKMNNVLIDDRRIRVDFSQSVAKEWSKYKGRAQGGQKLASGKGGKPAQQPQQNNTQRDGHASGGGHGAAGQHRKSKWGNAPVSGGVAHVVGKPPSENRRGGDATSHRQDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRGGRGDRRD 465

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BLAST of mRNA_Ecto-sp13_S_contig10425.408.1 vs. uniprot
Match: A0A836CGJ7_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGJ7_9STRA)

HSP 1 Score: 239 bits (609), Expect = 8.450e-70
Identity = 129/181 (71.27%), Postives = 145/181 (80.11%), Query Frame = 0

Query:    1 DESPLRDRPEEEKVALRLGALDKVSLEADERTELEREKQARWQKTARSNAVVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTRHEIHPMFGTCRAEICRDHITGDSLNYAFVEFEAIESCEEAFKKMNNVLIDDRRIRVDFSQSVAKEWSKYKGRAQGGQKLSSGKGGKPAQQ 181
            D SP+RDRPEEE+V  RLGA +  +L  D+    E  ++A   + A+S+AVVLEMIGDLPDAD  PPENVLFVCKLNPVTTDDDLEIIFTR      FG C+AEI RDHITGDSLNYAFVEFE +E+CEEAFKKMNNVLIDDRRIRVDFSQSVAKEW KY+ RA GGQKL SG+G  P +Q
Sbjct:  176 DASPVRDRPEEERVVPRLGAHE--ALHPDDGKSAEEIEKALRDREAKSHAVVLEMIGDLPDADAAPPENVLFVCKLNPVTTDDDLEIIFTR------FGPCKAEIVRDHITGDSLNYAFVEFETVEACEEAFKKMNNVLIDDRRIRVDFSQSVAKEWGKYRLRAAGGQKLKSGQGAPPRRQ 348

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BLAST of mRNA_Ecto-sp13_S_contig10425.408.1 vs. uniprot
Match: A0A6H5JBH5_9PHAE (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBH5_9PHAE)

HSP 1 Score: 226 bits (575), Expect = 1.020e-64
Identity = 113/125 (90.40%), Postives = 114/125 (91.20%), Query Frame = 0

Query:   43 QKTARSNAVVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTRHEIHPM----------FGTCRAEICRDHITGDSLNYAFVEFEAIESCEEAFKKMNNVLIDDRRIRVDFSQSVAKEW 157
            +KTARSNAVVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTRHEIHP           FGTCRAEICRDHITGDSLNYAFVEFEAIESCEEAFKKMNNVLIDDRRIRVDFSQSVAKEW
Sbjct:  170 EKTARSNAVVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTRHEIHPTSACFLSLITWFGTCRAEICRDHITGDSLNYAFVEFEAIESCEEAFKKMNNVLIDDRRIRVDFSQSVAKEW 294

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BLAST of mRNA_Ecto-sp13_S_contig10425.408.1 vs. uniprot
Match: A0A836CLW3_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLW3_9STRA)

HSP 1 Score: 206 bits (524), Expect = 1.110e-60
Identity = 111/153 (72.55%), Postives = 123/153 (80.39%), Query Frame = 0

Query:    3 SPLRDRPEEEKVALRLGALDKVSLEADERTELEREKQARWQKTARSNAVVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTRHEIHPMFGTCRAEICRDHITGDSLNYAFVEFEAIESCEEAFKKMNNVLIDDRRIRVDFSQSVAK 155
            SP RDRPEEE+V LRLGA +  +L  D+    E  ++A   + A+S+AVVLEMIGDLPDAD  PPENVLF CKLNPVTTDDDLEIIFTR      FG C+AEI RDHITGDSLNYAFVEFE +E+CEEAFKKMNNVLIDDRRIRVDFSQSV K
Sbjct:   66 SPARDRPEEERVVLRLGAHE--ALHPDDGKYAEEIEKALRDREAKSHAVVLEMIGDLPDADAAPPENVLFGCKLNPVTTDDDLEIIFTR------FGPCKAEIVRDHITGDSLNYAFVEFETVEACEEAFKKMNNVLIDDRRIRVDFSQSVPK 210

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BLAST of mRNA_Ecto-sp13_S_contig10425.408.1 vs. uniprot
Match: W7U8L5_9STRA (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U8L5_9STRA)

HSP 1 Score: 190 bits (483), Expect = 1.040e-51
Identity = 108/175 (61.71%), Postives = 129/175 (73.71%), Query Frame = 0

Query:    1 DESPLRDRPEEEKVALRLGALD--KVSLEADERTELEREKQARWQKTARSNAVVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTRHEIHPMFGT-CRAEICRDHITGDSLNYAFVEFEAIESCEEAFKKMNNVLIDDRRIRVDFSQSVAKEWSKYKGRAQGGQKLSS 172
            D SP R RPE E V  RL  L+  +  L A+   E  RE +A         AVVLEMIGDLPDA++KPPENVLFVCKLNP+TTD+DLEIIF+R      FGT  +AEICRD +TGDSLNYAFVEF+ +ESCEEA+KKMNN L+DDRRI+VDFSQSVAK+W++Y  R +G  K+ S
Sbjct:  181 DASPARGRPEAESVNPRLIDLEDEEDGLTAEALEERIREVEAN------KRAVVLEMIGDLPDAEIKPPENVLFVCKLNPITTDEDLEIIFSR------FGTGVKAEICRDPVTGDSLNYAFVEFDDVESCEEAYKKMNNALVDDRRIKVDFSQSVAKQWNRYTMRPRGSTKIKS 343

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BLAST of mRNA_Ecto-sp13_S_contig10425.408.1 vs. uniprot
Match: K3WBH2_GLOUD (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WBH2_GLOUD)

HSP 1 Score: 181 bits (459), Expect = 5.620e-49
Identity = 96/158 (60.76%), Postives = 121/158 (76.58%), Query Frame = 0

Query:    3 SPLRDRPEEEKVALRLGALDKVSLEADERTELEREKQARWQKTARSNAVVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTRHEIHPMFGTCRAEICRDHITGDSLNYAFVEFEAIESCEEAFKKMNNVLIDDRRIRVDFSQSVAKEWSKY 160
            SP+RDRPEEE V +RL A +K++ + D RTE E EK  R +K A+S AVVLEMIGD+PDAD KPPE VLFVCKLNP+T   DL++ F R      FG C++++ RD+ TGDSL +AFVEF   + CEEA+ KMNNVL+DDRRI+VDFSQSV+K W+K+
Sbjct:   84 SPMRDRPEEETVEVRLTADEKLNDDNDGRTEEEIEKSLR-EKEAKSRAVVLEMIGDIPDADAKPPEEVLFVCKLNPITESSDLDMAFCR------FGPCKSQVIRDYKTGDSLCFAFVEFTDRKHCEEAYFKMNNVLMDDRRIKVDFSQSVSKLWNKF 234

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BLAST of mRNA_Ecto-sp13_S_contig10425.408.1 vs. uniprot
Match: A0A8K1FD03_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FD03_PYTOL)

HSP 1 Score: 178 bits (451), Expect = 2.980e-48
Identity = 101/163 (61.96%), Postives = 123/163 (75.46%), Query Frame = 0

Query:    2 ESPLRDRPEEEKVALRLGALDKVSLEADE-RTELEREKQARWQKTARSNAVVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTRHEIHPMFGTCRAEICRDHITGDSLNYAFVEFEAIESCEEAFKKMNNVLIDDRRIRVDFSQSVAKEWSKYKGR 163
            ESP R+RPEEE V +RL A +K  L+ DE RTE E EK  R +K A+S AVVLEMIGDLPDAD+KPPE VLFVCKLN VT  +DL++ F R      FG C++E+ RD  TG+SL YAF+EF+    CEEA+ KMNNVL+DDRRI+VDFSQSV+K W+K+K R
Sbjct:  178 ESPKRERPEEETVEVRLAADEK--LDDDEGRTEEEIEKSLR-EKEAKSRAVVLEMIGDLPDADVKPPEEVLFVCKLNAVTESEDLDMAFCR------FGPCKSEVIRDSKTGESLCYAFIEFQEKSHCEEAYFKMNNVLLDDRRIKVDFSQSVSKLWNKFKRR 331

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BLAST of mRNA_Ecto-sp13_S_contig10425.408.1 vs. uniprot
Match: H3G7W7_PHYRM (Peptidyl-prolyl cis-trans isomerase n=4 Tax=Phytophthora TaxID=4783 RepID=H3G7W7_PHYRM)

HSP 1 Score: 176 bits (447), Expect = 4.060e-48
Identity = 100/161 (62.11%), Postives = 119/161 (73.91%), Query Frame = 0

Query:    3 SPLRDRPEEEKVALRLGALDKVSLEADERTELEREKQARWQKTARSNAVVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTRHEIHPMFGTCRAEICRDHITGDSLNYAFVEFEAIESCEEAFKKMNNVLIDDRRIRVDFSQSVAKEWSKYKGR 163
            SP R+RPE+E+V  RL A +K+  E + RTE E EK  R +K A+S AVVLEMIGDLPDAD+KPPE VLFVCKLNPVT   DL++ F R      FG C+AE+ RD  TGDSL +AFVEF     CEEA+ KMNNVL+DDRRI+VDFSQSV+K W+K K R
Sbjct:  184 SPTRERPEQEQVEPRLAADEKLD-ENEGRTEQEIEKAVR-EKEAKSRAVVLEMIGDLPDADVKPPEEVLFVCKLNPVTESADLDMAFCR------FGQCKAEVIRDQKTGDSLCFAFVEFTDRRHCEEAYFKMNNVLLDDRRIKVDFSQSVSKLWNKVKRR 336

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BLAST of mRNA_Ecto-sp13_S_contig10425.408.1 vs. uniprot
Match: W2Q2C5_PHYPN (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2Q2C5_PHYPN)

HSP 1 Score: 179 bits (455), Expect = 2.180e-47
Identity = 101/161 (62.73%), Postives = 120/161 (74.53%), Query Frame = 0

Query:    3 SPLRDRPEEEKVALRLGALDKVSLEADERTELEREKQARWQKTARSNAVVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTRHEIHPMFGTCRAEICRDHITGDSLNYAFVEFEAIESCEEAFKKMNNVLIDDRRIRVDFSQSVAKEWSKYKGR 163
            SP R+RPEEE+V  RL A +K+  E + RTE E EK  R +K A+S AVVLEMIGDLPDAD+KPPE VLFVCKLNPVT   DL++ F R      FG C++E+ RDH TGDSL +AFVEF     CEEA+ KMNNVL+DDRRI+VDFSQSV+K W+K K R
Sbjct:  184 SPTRERPEEEQVEPRLAADEKLD-ENEGRTEQEIEKAVR-EKEAKSRAVVLEMIGDLPDADVKPPEEVLFVCKLNPVTESADLDMAFCR------FGPCKSEVIRDHKTGDSLCFAFVEFTDRRHCEEAYFKMNNVLLDDRRIKVDFSQSVSKLWNKVKRR 336

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BLAST of mRNA_Ecto-sp13_S_contig10425.408.1 vs. uniprot
Match: F0W8Y3_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W8Y3_9STRA)

HSP 1 Score: 176 bits (447), Expect = 3.050e-47
Identity = 96/158 (60.76%), Postives = 117/158 (74.05%), Query Frame = 0

Query:    3 SPLRDRPEEEKVALRLGALDKVSLEADERTELEREKQARWQKTARSNAVVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTRHEIHPMFGTCRAEICRDHITGDSLNYAFVEFEAIESCEEAFKKMNNVLIDDRRIRVDFSQSVAKEWSKY 160
            SP RDRPEEE V +R+ A ++     DERT  E EK  R +K A+S AVVLEMIGD+PDAD+KPPE VLFVCKLNPVT   DL++ F R      FG C++E+ RD  TGDSL YAFVEF   + CEEA+ KMNNVL+DDRRI+VDFSQSV+K W+++
Sbjct:  179 SPTRDRPEEESVPVRMAADEEPE---DERTAEEIEKSVR-EKEAKSRAVVLEMIGDIPDADIKPPEEVLFVCKLNPVTESSDLDMAFCR------FGACKSEVIRDFKTGDSLCYAFVEFTEKKHCEEAYFKMNNVLLDDRRIKVDFSQSVSKLWNQF 326

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig10425.408.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig10425.408.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FHH9_ECTSI	3.010e-140	91.87	Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ectoca...	[more]
A0A836CGJ7_9STRA	8.450e-70	71.27	Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribon...	[more]
A0A6H5JBH5_9PHAE	1.020e-64	90.40	Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ectoca...	[more]
A0A836CLW3_9STRA	1.110e-60	72.55	Peptidylprolyl isomerase n=1 Tax=Tribonema minus T...	[more]
W7U8L5_9STRA	1.040e-51	61.71	Peptidyl-prolyl cis-trans isomerase n=2 Tax=Monodo...	[more]
K3WBH2_GLOUD	5.620e-49	60.76	Peptidyl-prolyl cis-trans isomerase n=1 Tax=Globis...	[more]
A0A8K1FD03_PYTOL	2.980e-48	61.96	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
H3G7W7_PHYRM	4.060e-48	62.11	Peptidyl-prolyl cis-trans isomerase n=4 Tax=Phytop...	[more]
W2Q2C5_PHYPN	2.180e-47	62.73	Peptidyl-prolyl cis-trans isomerase n=1 Tax=Phytop...	[more]
F0W8Y3_9STRA	3.050e-47	60.76	Peptidyl-prolyl cis-trans isomerase n=1 Tax=Albugo...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 70..148 e-value: 2.7E-13 score: 60.2
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 71..146 e-value: 7.0E-9 score: 35.4
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 69..152 score: 13.362
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 6..161 e-value: 4.1E-19 score: 71.1
IPR035542	Cyclophilin-RNA interacting protein	PANTHER	PTHR45843	FAMILY NOT NAMED	coord: 3..406
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 51..176

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig10425	contig	Ecto-sp13_S_contig10425:2..4023 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig10425.408.1	mRNA_Ecto-sp13_S_contig10425.408.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig10425 2..4023 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig10425.408.1 ID=prot_Ecto-sp13_S_contig10425.408.1|Name=mRNA_Ecto-sp13_S_contig10425.408.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=418bp
DESPLRDRPEEEKVALRLGALDKVSLEADERTELEREKQARWQKTARSNA
VVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTRHEIHPMFGT
CRAEICRDHITGDSLNYAFVEFEAIESCEEAFKKMNNVLIDDRRIRVDFS
QSVAKEWSKYKGRAQGGQKLSSGKGGKPAQQPQQNNTQRDHHASGGGRGA
VDQHRKSKWGNAPVSGGVAHAVGKPPSENRRGGDATSHRRDGGRNDEGES
VASRRGNNETVGGGGHGRRREEDRRGGRGDRRDLGGDGRRGDGGRKDDRG
DRRHGGDDGGVRRIRDDESERRGRTDEASRGGDGRHGGSRHSRARGGEGR
TAEDEGRNGGGRSTNDDRGHRDDRHRGSRERGHGGGDDRSKRHDRSRSRS
REKNRRRGGSRDRRSKR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR035542	CRIP
IPR035979	RBD_domain_sf