mRNA_Ecto-sp13_S_contig10425.408.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig10425.408.1
Unique NamemRNA_Ecto-sp13_S_contig10425.408.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig10425.408.1 vs. uniprot
Match: D7FHH9_ECTSI (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH9_ECTSI)

HSP 1 Score: 422 bits (1085), Expect = 3.010e-140
Identity = 260/283 (91.87%), Postives = 262/283 (92.58%), Query Frame = 1 
Query:    1 DESPLRDRPEEEKVALRLGALDKVSLEADERTELEREKQARWQKTARSNAVVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTRHEIHPMFGTCRAEICRDHITGDSLNYAFVEFEAIESCEEAFKKMNNVLIDDRRIRVDFSQSVAKEWSKYKGRAQGGQKLSSGKGGKPAQQPQQNNTQRDHHASGGGRGAVDQHRKSKWGNAPVSGGVAHAVGKPPSENRRGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRGGRGDRRD 849
            DESPLRDRPEEEKVALRLGALDKVSLEADERTELEREKQ R +KTARSNAVVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTR      FGTCRAEICRDHITGDSLNYAFVEFEAIESCEEAFKKMNNVLIDDRRIRVDFSQSVAKEWSKYKGRAQGGQKL+SGKGGKPAQQPQQNNTQRD HASGGG GA  QHRKSKWGNAPVSGGVAH VGKPPSENRRGGD        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRGGRGDRRD
Sbjct:  190 DESPLRDRPEEEKVALRLGALDKVSLEADERTELEREKQLR-EKTARSNAVVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTR------FGTCRAEICRDHITGDSLNYAFVEFEAIESCEEAFKKMNNVLIDDRRIRVDFSQSVAKEWSKYKGRAQGGQKLASGKGGKPAQQPQQNNTQRDGHASGGGHGAAGQHRKSKWGNAPVSGGVAHVVGKPPSENRRGGDATSHRQDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRGGRGDRRD 465
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BLAST of mRNA_Ecto-sp13_S_contig10425.408.1 vs. uniprot
Match: A0A6H5JBH5_9PHAE (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBH5_9PHAE)

HSP 1 Score: 362 bits (930), Expect = 1.460e-117
Identity = 216/252 (85.71%), Postives = 218/252 (86.51%), Query Frame = 2 
Query:  497 GARSCQAERGASQHSSHSRITPNGTTTPRVAGAALWISTAKANGGTPL*AGGWRMRSENRPRRTGGEEMPPRTVGTEGETTKGNRSPLGGAITRQSGVVDTVVDGKRTAGVAEETGATLAATEDAEMAEGRMTGATGGMAVTTAECGAFATMKASAEGGRTKPRGEGTGDTVGVGTAEPEVGRVERRKTKDAMAAAVARTTIVVTEMTATAAVENAATGGATIALNDTTVAGVGVAKRIVGGVGVGIGDRSG 1252
            GARS  AERGASQHSSHSR TP  T TPRVA  AL +STAKANGGTPL AG W MRS NRPRR+ GEEMPPRTVGTEGETTKGNR  LGGAITRQSGVVDTVVDGKRTAG AEETGAT AATEDA MAEGRMTGATGGMAVTTA  GA ATM ASAE G TKPR EGTGD VGVGTAEPEVGRVE RKTK A AAA ARTTIVVTEMTATAAVENAATGGAT ALNDTTVAG  VAKRIVGGVGVGIGDRSG
Sbjct:  295 GARSWLAERGASQHSSHSRTTPKETATPRVARTALRVSTAKANGGTPLSAGRWHMRSGNRPRRSCGEEMPPRTVGTEGETTKGNRPLLGGAITRQSGVVDTVVDGKRTAGAAEETGATAAATEDAGMAEGRMTGATGGMAVTTAGHGALATMNASAERGGTKPRVEGTGDKVGVGTAEPEVGRVEGRKTKVATAAAAARTTIVVTEMTATAAVENAATGGATTALNDTTVAGAEVAKRIVGGVGVGIGDRSG 546
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BLAST of mRNA_Ecto-sp13_S_contig10425.408.1 vs. uniprot
Match: A0A836CGJ7_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGJ7_9STRA)

HSP 1 Score: 239 bits (609), Expect = 8.450e-70
Identity = 129/181 (71.27%), Postives = 145/181 (80.11%), Query Frame = 1 
Query:    1 DESPLRDRPEEEKVALRLGALDKVSLEADERTELEREKQARWQKTARSNAVVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTRHEIHPMFGTCRAEICRDHITGDSLNYAFVEFEAIESCEEAFKKMNNVLIDDRRIRVDFSQSVAKEWSKYKGRAQGGQKLSSGKGGKPAQQ 543
            D SP+RDRPEEE+V  RLGA +  +L  D+    E  ++A   + A+S+AVVLEMIGDLPDAD  PPENVLFVCKLNPVTTDDDLEIIFTR      FG C+AEI RDHITGDSLNYAFVEFE +E+CEEAFKKMNNVLIDDRRIRVDFSQSVAKEW KY+ RA GGQKL SG+G  P +Q
Sbjct:  176 DASPVRDRPEEERVVPRLGAHE--ALHPDDGKSAEEIEKALRDREAKSHAVVLEMIGDLPDADAAPPENVLFVCKLNPVTTDDDLEIIFTR------FGPCKAEIVRDHITGDSLNYAFVEFETVEACEEAFKKMNNVLIDDRRIRVDFSQSVAKEWGKYRLRAAGGQKLKSGQGAPPRRQ 348
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BLAST of mRNA_Ecto-sp13_S_contig10425.408.1 vs. uniprot
Match: A0A836CLW3_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLW3_9STRA)

HSP 1 Score: 206 bits (524), Expect = 1.110e-60
Identity = 111/153 (72.55%), Postives = 123/153 (80.39%), Query Frame = 1 
Query:    7 SPLRDRPEEEKVALRLGALDKVSLEADERTELEREKQARWQKTARSNAVVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTRHEIHPMFGTCRAEICRDHITGDSLNYAFVEFEAIESCEEAFKKMNNVLIDDRRIRVDFSQSVAK 465
            SP RDRPEEE+V LRLGA +  +L  D+    E  ++A   + A+S+AVVLEMIGDLPDAD  PPENVLF CKLNPVTTDDDLEIIFTR      FG C+AEI RDHITGDSLNYAFVEFE +E+CEEAFKKMNNVLIDDRRIRVDFSQSV K
Sbjct:   66 SPARDRPEEERVVLRLGAHE--ALHPDDGKYAEEIEKALRDREAKSHAVVLEMIGDLPDADAAPPENVLFGCKLNPVTTDDDLEIIFTR------FGPCKAEIVRDHITGDSLNYAFVEFETVEACEEAFKKMNNVLIDDRRIRVDFSQSVPK 210
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BLAST of mRNA_Ecto-sp13_S_contig10425.408.1 vs. uniprot
Match: W7U8L5_9STRA (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U8L5_9STRA)

HSP 1 Score: 190 bits (483), Expect = 1.040e-51
Identity = 108/175 (61.71%), Postives = 129/175 (73.71%), Query Frame = 1 
Query:    1 DESPLRDRPEEEKVALRLGALD--KVSLEADERTELEREKQARWQKTARSNAVVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTRHEIHPMFGT-CRAEICRDHITGDSLNYAFVEFEAIESCEEAFKKMNNVLIDDRRIRVDFSQSVAKEWSKYKGRAQGGQKLSS 516
            D SP R RPE E V  RL  L+  +  L A+   E  RE +A         AVVLEMIGDLPDA++KPPENVLFVCKLNP+TTD+DLEIIF+R      FGT  +AEICRD +TGDSLNYAFVEF+ +ESCEEA+KKMNN L+DDRRI+VDFSQSVAK+W++Y  R +G  K+ S
Sbjct:  181 DASPARGRPEAESVNPRLIDLEDEEDGLTAEALEERIREVEAN------KRAVVLEMIGDLPDAEIKPPENVLFVCKLNPITTDEDLEIIFSR------FGTGVKAEICRDPVTGDSLNYAFVEFDDVESCEEAYKKMNNALVDDRRIKVDFSQSVAKQWNRYTMRPRGSTKIKS 343
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BLAST of mRNA_Ecto-sp13_S_contig10425.408.1 vs. uniprot
Match: K3WBH2_GLOUD (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WBH2_GLOUD)

HSP 1 Score: 181 bits (459), Expect = 5.620e-49
Identity = 96/158 (60.76%), Postives = 121/158 (76.58%), Query Frame = 1 
Query:    7 SPLRDRPEEEKVALRLGALDKVSLEADERTELEREKQARWQKTARSNAVVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTRHEIHPMFGTCRAEICRDHITGDSLNYAFVEFEAIESCEEAFKKMNNVLIDDRRIRVDFSQSVAKEWSKY 480
            SP+RDRPEEE V +RL A +K++ + D RTE E EK  R +K A+S AVVLEMIGD+PDAD KPPE VLFVCKLNP+T   DL++ F R      FG C++++ RD+ TGDSL +AFVEF   + CEEA+ KMNNVL+DDRRI+VDFSQSV+K W+K+
Sbjct:   84 SPMRDRPEEETVEVRLTADEKLNDDNDGRTEEEIEKSLR-EKEAKSRAVVLEMIGDIPDADAKPPEEVLFVCKLNPITESSDLDMAFCR------FGPCKSQVIRDYKTGDSLCFAFVEFTDRKHCEEAYFKMNNVLMDDRRIKVDFSQSVSKLWNKF 234
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BLAST of mRNA_Ecto-sp13_S_contig10425.408.1 vs. uniprot
Match: A0A8K1FD03_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FD03_PYTOL)

HSP 1 Score: 178 bits (451), Expect = 2.980e-48
Identity = 101/163 (61.96%), Postives = 123/163 (75.46%), Query Frame = 1 
Query:    4 ESPLRDRPEEEKVALRLGALDKVSLEADE-RTELEREKQARWQKTARSNAVVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTRHEIHPMFGTCRAEICRDHITGDSLNYAFVEFEAIESCEEAFKKMNNVLIDDRRIRVDFSQSVAKEWSKYKGR 489
            ESP R+RPEEE V +RL A +K  L+ DE RTE E EK  R +K A+S AVVLEMIGDLPDAD+KPPE VLFVCKLN VT  +DL++ F R      FG C++E+ RD  TG+SL YAF+EF+    CEEA+ KMNNVL+DDRRI+VDFSQSV+K W+K+K R
Sbjct:  178 ESPKRERPEEETVEVRLAADEK--LDDDEGRTEEEIEKSLR-EKEAKSRAVVLEMIGDLPDADVKPPEEVLFVCKLNAVTESEDLDMAFCR------FGPCKSEVIRDSKTGESLCYAFIEFQEKSHCEEAYFKMNNVLLDDRRIKVDFSQSVSKLWNKFKRR 331
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BLAST of mRNA_Ecto-sp13_S_contig10425.408.1 vs. uniprot
Match: H3G7W7_PHYRM (Peptidyl-prolyl cis-trans isomerase n=4 Tax=Phytophthora TaxID=4783 RepID=H3G7W7_PHYRM)

HSP 1 Score: 176 bits (447), Expect = 4.060e-48
Identity = 100/161 (62.11%), Postives = 119/161 (73.91%), Query Frame = 1 
Query:    7 SPLRDRPEEEKVALRLGALDKVSLEADERTELEREKQARWQKTARSNAVVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTRHEIHPMFGTCRAEICRDHITGDSLNYAFVEFEAIESCEEAFKKMNNVLIDDRRIRVDFSQSVAKEWSKYKGR 489
            SP R+RPE+E+V  RL A +K+  E + RTE E EK  R +K A+S AVVLEMIGDLPDAD+KPPE VLFVCKLNPVT   DL++ F R      FG C+AE+ RD  TGDSL +AFVEF     CEEA+ KMNNVL+DDRRI+VDFSQSV+K W+K K R
Sbjct:  184 SPTRERPEQEQVEPRLAADEKLD-ENEGRTEQEIEKAVR-EKEAKSRAVVLEMIGDLPDADVKPPEEVLFVCKLNPVTESADLDMAFCR------FGQCKAEVIRDQKTGDSLCFAFVEFTDRRHCEEAYFKMNNVLLDDRRIKVDFSQSVSKLWNKVKRR 336
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BLAST of mRNA_Ecto-sp13_S_contig10425.408.1 vs. uniprot
Match: W2Q2C5_PHYPN (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2Q2C5_PHYPN)

HSP 1 Score: 179 bits (455), Expect = 2.180e-47
Identity = 101/161 (62.73%), Postives = 120/161 (74.53%), Query Frame = 1 
Query:    7 SPLRDRPEEEKVALRLGALDKVSLEADERTELEREKQARWQKTARSNAVVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTRHEIHPMFGTCRAEICRDHITGDSLNYAFVEFEAIESCEEAFKKMNNVLIDDRRIRVDFSQSVAKEWSKYKGR 489
            SP R+RPEEE+V  RL A +K+  E + RTE E EK  R +K A+S AVVLEMIGDLPDAD+KPPE VLFVCKLNPVT   DL++ F R      FG C++E+ RDH TGDSL +AFVEF     CEEA+ KMNNVL+DDRRI+VDFSQSV+K W+K K R
Sbjct:  184 SPTRERPEEEQVEPRLAADEKLD-ENEGRTEQEIEKAVR-EKEAKSRAVVLEMIGDLPDADVKPPEEVLFVCKLNPVTESADLDMAFCR------FGPCKSEVIRDHKTGDSLCFAFVEFTDRRHCEEAYFKMNNVLLDDRRIKVDFSQSVSKLWNKVKRR 336
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10425.408.1 vs. uniprot
Match: F0W8Y3_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W8Y3_9STRA)

HSP 1 Score: 176 bits (447), Expect = 3.050e-47
Identity = 96/158 (60.76%), Postives = 117/158 (74.05%), Query Frame = 1 
Query:    7 SPLRDRPEEEKVALRLGALDKVSLEADERTELEREKQARWQKTARSNAVVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTRHEIHPMFGTCRAEICRDHITGDSLNYAFVEFEAIESCEEAFKKMNNVLIDDRRIRVDFSQSVAKEWSKY 480
            SP RDRPEEE V +R+ A ++     DERT  E EK  R +K A+S AVVLEMIGD+PDAD+KPPE VLFVCKLNPVT   DL++ F R      FG C++E+ RD  TGDSL YAFVEF   + CEEA+ KMNNVL+DDRRI+VDFSQSV+K W+++
Sbjct:  179 SPTRDRPEEESVPVRMAADEEPE---DERTAEEIEKSVR-EKEAKSRAVVLEMIGDIPDADIKPPEEVLFVCKLNPVTESSDLDMAFCR------FGACKSEVIRDFKTGDSLCYAFVEFTEKKHCEEAYFKMNNVLLDDRRIKVDFSQSVSKLWNQF 326
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10425.408.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHH9_ECTSI3.010e-14091.87Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ectoca... [more]
A0A6H5JBH5_9PHAE1.460e-11785.71Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ectoca... [more]
A0A836CGJ7_9STRA8.450e-7071.27Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribon... [more]
A0A836CLW3_9STRA1.110e-6072.55Peptidylprolyl isomerase n=1 Tax=Tribonema minus T... [more]
W7U8L5_9STRA1.040e-5161.71Peptidyl-prolyl cis-trans isomerase n=2 Tax=Monodo... [more]
K3WBH2_GLOUD5.620e-4960.76Peptidyl-prolyl cis-trans isomerase n=1 Tax=Globis... [more]
A0A8K1FD03_PYTOL2.980e-4861.96Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
H3G7W7_PHYRM4.060e-4862.11Peptidyl-prolyl cis-trans isomerase n=4 Tax=Phytop... [more]
W2Q2C5_PHYPN2.180e-4762.73Peptidyl-prolyl cis-trans isomerase n=1 Tax=Phytop... [more]
F0W8Y3_9STRA3.050e-4760.76Peptidyl-prolyl cis-trans isomerase n=1 Tax=Albugo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10425contigEcto-sp13_S_contig10425:2..4023 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score427.2
Seed ortholog evalue9e-117
Seed eggNOG ortholog2880.D7FHH9
Preferred namePPIL4
Model size1254
KEGG koko:K03061,ko:K05012,ko:K09517,ko:K12735,ko:K12737
KEGG TC2.A.49.1.1,2.A.49.1.2,2.A.49.1.3,2.A.49.2.2,2.A.49.2.3,2.A.49.2.8
KEGG Pathwayko03050,ko04141,ko05169,map03050,map04141,map05169
KEGG ModuleM00341
Hectar predicted targeting categoryother localisation
GOsGO:0000228,GO:0000375,GO:0000377,GO:0000398,GO:0000413,GO:0000414,GO:0000416,GO:0000502,GO:0000785,GO:0000790,GO:0000993,GO:0001098,GO:0001099,GO:0001932,GO:0001934,GO:0002119,GO:0002164,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003755,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005694,GO:0005737,GO:0005829,GO:0005838,GO:0006139,GO:0006351,GO:0006355,GO:0006357,GO:0006396,GO:0006397,GO:0006464,GO:0006508,GO:0006511,GO:0006725,GO:0006807,GO:0006950,GO:0007275,GO:0008134,GO:0008150,GO:0008152,GO:0008380,GO:0008540,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009791,GO:0009889,GO:0009891,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010033,GO:0010243,GO:0010467,GO:0010468,GO:0010470,GO:0010498,GO:0010556,GO:0010557,GO:0010562,GO:0010604,GO:0010628,GO:0010638,GO:0010720,GO:0016070,GO:0016071,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016859,GO:0016887,GO:0017025,GO:0017111,GO:0018130,GO:0018193,GO:0018208,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019538,GO:0019899,GO:0019941,GO:0022603,GO:0022624,GO:0030162,GO:0030163,GO:0030433,GO:0031056,GO:0031058,GO:0031060,GO:0031062,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031331,GO:0031334,GO:0031399,GO:0031401,GO:0031595,GO:0031597,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032774,GO:0032784,GO:0032786,GO:0032991,GO:0033043,GO:0033044,GO:0033120,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0034976,GO:0035327,GO:0036211,GO:0036402,GO:0036503,GO:0040008,GO:0040019,GO:0040026,GO:0040028,GO:0042176,GO:0042221,GO:0042325,GO:0042327,GO:0042623,GO:0043161,GO:0043170,GO:0043175,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043412,GO:0043484,GO:0043632,GO:0043900,GO:0043902,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044445,GO:0044446,GO:0044454,GO:0044464,GO:0044877,GO:0045595,GO:0045597,GO:0045732,GO:0045862,GO:0045893,GO:0045898,GO:0045899,GO:0045927,GO:0045935,GO:0045937,GO:0045944,GO:0045995,GO:0046483,GO:0048518,GO:0048522,GO:0048580,GO:0048582,GO:0048638,GO:0048639,GO:0048856,GO:0050684,GO:0050685,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051174,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051569,GO:0051571,GO:0051603,GO:0051716,GO:0060255,GO:0060260,GO:0060261,GO:0060281,GO:0060282,GO:0060284,GO:0061062,GO:0061063,GO:0061136,GO:0065007,GO:0070013,GO:0070063,GO:0071012,GO:0071013,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140096,GO:1901360,GO:1901362,GO:1901363,GO:1901407,GO:1901409,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901698,GO:1901800,GO:1902275,GO:1902494,GO:1902680,GO:1903050,GO:1903052,GO:1903311,GO:1903313,GO:1903362,GO:1903364,GO:1903506,GO:1903508,GO:1905269,GO:1905368,GO:1905369,GO:1905435,GO:1905437,GO:1905471,GO:1905473,GO:1905879,GO:1905881,GO:1990904,GO:2000026,GO:2000112,GO:2000142,GO:2000144,GO:2000241,GO:2000243,GO:2000543,GO:2001141,GO:2001160,GO:2001162,GO:2001163,GO:2001165,GO:2001252,GO:2001253,GO:2001255
Exons5
EggNOG free text desc.peptidyl-prolyl cis-trans isomerase activity
EggNOG OGsCOG0652@1,KOG0415@2759
Ec32 ortholog descriptionCyclophilin
Ec32 orthologEc-25_002310.1
EC5.2.1.8
Cds size1254
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03041,ko03051,ko03110,ko04040
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462530.2440279-CDS-Ecto-sp13_S_contig10425:1..1281681462530.2440279-CDS-Ecto-sp13_S_contig10425:1..128Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10425 2..128 +
1681462530.2547965-CDS-Ecto-sp13_S_contig10425:863..10261681462530.2547965-CDS-Ecto-sp13_S_contig10425:863..1026Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10425 864..1026 +
1681462530.2680652-CDS-Ecto-sp13_S_contig10425:1295..13951681462530.2680652-CDS-Ecto-sp13_S_contig10425:1295..1395Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10425 1296..1395 +
1681462530.276326-CDS-Ecto-sp13_S_contig10425:2847..29271681462530.276326-CDS-Ecto-sp13_S_contig10425:2847..2927Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10425 2848..2927 +
1681462530.2846754-CDS-Ecto-sp13_S_contig10425:3239..40231681462530.2846754-CDS-Ecto-sp13_S_contig10425:3239..4023Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10425 3240..4023 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10425.408.1prot_Ecto-sp13_S_contig10425.408.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig10425 2..4023 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig10425.408.1

>prot_Ecto-sp13_S_contig10425.408.1 ID=prot_Ecto-sp13_S_contig10425.408.1|Name=mRNA_Ecto-sp13_S_contig10425.408.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=418bp
DESPLRDRPEEEKVALRLGALDKVSLEADERTELEREKQARWQKTARSNA
VVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTRHEIHPMFGT
CRAEICRDHITGDSLNYAFVEFEAIESCEEAFKKMNNVLIDDRRIRVDFS
QSVAKEWSKYKGRAQGGQKLSSGKGGKPAQQPQQNNTQRDHHASGGGRGA
VDQHRKSKWGNAPVSGGVAHAVGKPPSENRRGGDATSHRRDGGRNDEGES
VASRRGNNETVGGGGHGRRREEDRRGGRGDRRDLGGDGRRGDGGRKDDRG
DRRHGGDDGGVRRIRDDESERRGRTDEASRGGDGRHGGSRHSRARGGEGR
TAEDEGRNGGGRSTNDDRGHRDDRHRGSRERGHGGGDDRSKRHDRSRSRS
REKNRRRGGSRDRRSKR*
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mRNA from alignment at Ecto-sp13_S_contig10425:2..4023+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig10425.408.1 ID=mRNA_Ecto-sp13_S_contig10425.408.1|Name=mRNA_Ecto-sp13_S_contig10425.408.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4022bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10425:2..4023+ (Ectocarpus species13 EcNAP12_S_4_19m)
GATGAGTCCCCTCTGCGCGACCGGCCTGAGGAGGAAAAGGTGGCGCTGCG
CCTGGGAGCGCTGGACAAGGTGTCCTTGGAGGCCGACGAGAGGACGGAGC
TCGAAAGGGAGAAGCAGGCACGATGGCGTGAAATTTGTCTGGTTGTTGAT
GTGTTGCCGTTGCTGTTTATGACGTTGTTGTTGTTGCTGTTGTTGTCGTC
GTCGCGTTGCTGTGTTGATGATGTTGTTTCTGCTAACGGTCGCCTTGTTT
TGGTGGCGTTAGTTGTAGCACTTGTGTGGACGTTGCCATTGTTGTCGTTG
GTGTTGTTGATATAGTTGCTATGTATAGGTGGTTGGCTTGTTTTGGTGAC
GTTAGTAGTAGCGATTGCGGATGGTCTTGTTCTTAGCCGTGGCGATCTAT
CAAACCACGGGCAAACGAGCATAGACAGATACTGGAAAGGTAGCGCCGCA
AGATGATACGTTGCCTGGGCGGGGTGTTTTGCAAGGCGAGGCTGTCACTC
GATAAAAAAAATGGCATGTAGATAGCCAACGAGACAGAGCCACAAACGGA
TGGTCTAGCGAGCTACGGTGACTCGCGTATGACTTCGATTTTGCATCCTT
ATTCGGTAGTCGACCGCGGCCTGTCAGTTGCATCTTTGACGATGACGCGG
CCCCGGTACACTTCCAATTTGGTCAAGACGTTTAATTTGTTCACGCAGAT
ACGCCTCCTTTTGTGTAATAATGCCGCGGTTTGTCCGAGCGGTCGAAGGT
AGCGCGGCGGCCTTCCGTGTTCGCAAAACTAACGTCGATCGTCATGACCT
ATCATTTCTTTCGTCGGTTGTTCGCGCGCGGCGTGACCATGATTGGCCGC
TTCAGCTTAGAGAAAAGACGGCGAGGTCTAACGCTGTGGTGCTGGAGATG
ATCGGAGATCTCCCCGATGCGGACATGAAGCCGCCGGAGAACGTTCTGTT
CGTGTGCAAGCTCAACCCGGTCACCACTGACGACGACTTGGAGATTATCT
TCACCAGGCACGAAATACATCCGATGTCGGCCTGTTCTATAAGCTTCATT
ATTTGGTTGTTCTGTTTGCTGAGCAATTACTTGACTTTGTAAGCAAGCTG
AGTTATTGCCTCCGTTTGGAACGCTGGGGGAACAAGAACCCCATTTTTCA
GTTTTCATGTTACAGTATCCTGAGCAAGTACTAATCATAGAAGAAGCGGC
GCTGTTGCCTCCGTTTGGTGTCCTGGAAGAAAGAACGAAATGCTTTTTAA
GCGAAACTGTGGGCGTGTTGGCGCGCGGGCGCTCGGCGGAACAGGTTCGG
GACCTGCCGGGCCGAGATCTGCCGGGATCACATCACTGGCGACAGCCTTA
ACTACGCCTTCGTGGAGTTCGAGGCTATCGAGTCATGCGAGGAGGTGAGG
CCCTGACTTAACGCTTCAAAGTTGCACCTGAATAGAGGCCGTGCAAAACC
TAAGCTGGACAGGGGGTAGCGGGGGCCAAAGATGGTGGTTGTCAACAGCA
AATATAATACGGTGGGGCTTTCTTTGGCTGCCCGTAAAAGCGGGACTTAG
GTATTAGGTGCAGCGGATTGTTTCTTCGCTGAATGGAAGTGTACCAAGTT
GCACTGCACTCGTTTTTGCACCCCCCATGATGAGCTGACCTCGTGCTGGC
GTTGTCTCTGACTGGACCGAATGTGGCACACTGGCCGTGCGGCACCCACA
CGCATCGTCCACTGCCCTCAGGTGGGAAATACCCATATCGCGATGATTCT
GTGAGCGTGTTGAATTTTGACGATGGTTGGGTTTTTGCGGGGGTCGCGTC
TACTATGTGCGATGTCAAAAGCCAACGGTCGGTTGTGTGCAGCGAGACAG
TTCGAACAAAGTTGTAGAGCAAGCCTGAGGATGAGGCTTGGACCACTACT
ACCGCCTGCTGAGCTGCGTCGTGTGTGTACTGATTGATGTACTGCTCCCG
TGTAGTGCACATAGTCGATCGCTCGACCTGTTTGGTCGCCACGTCACCTC
GCTGCAGCGATTGGGTGTTGCTGAACCTCGATTGGCATTTGGGTGTGGCC
AAATGCGCGAAACGACGCCCTTTTTGGCCAATAACCCGATTAGGTCCATC
CAATTTTGGTCCTCAATTAAGTGAAAATTTTAAGGTTCAAACAGGTCCTG
AGGACGTGGCACACCAGGGACAAAACCAGTACGAAAACCTCAATAACGGT
ATGGAAATCCACAAACCACAGCGGAGGTTGGTTGAATGGAACCCTTCAAG
ACATTACCAACGTAAAAATGGCGACAAAAGGAATGAACAAAGCGAAAGCG
TCGCCACGTGTTTGTTTTGTTAATCCGATTTGTATATCAGACCATCCGTT
GGTTGCAGTTACGGCACCAATAGCCATTGATTGGTCTTGCTGCGACCGAA
GGACTCCGACACTGGAAAATGGAAAGTCGGAATGGAGAGAGGAGCTTGAC
AAGAAAGAAGGGAGTGCTTCATTTTTGAGAGTAGAGTGCTTCATTTTTGA
GAATGGGAGTTCGTTTGTTGACGTGCCACCACGCCGTGTTGTCGTTATAG
GCCCGAAGCCGGCAGTTAGTCTGACGCGATTGTCGTTATTAGTGTTGTTG
CTGTTGCCCACACATTAATAACTGCTTCTCTGCACCTTCTATTGTCCGTA
GTACACTGGGCAAGGGCGATGCAGCCGTCTTCGTGGTCTCGGAGGATTCA
TTTTGGAAGAATTTAAGAGCAACAAAAGGGCCCTGAAAAAACAAAATGAT
CATCTACAGCTGTGGTACTTGTTTCGACGATGCCCCTGTGCTCGCTCCCA
TTCCACCTCCCCCCACCCCCCTATCCCTAATGTGACCGGAACACAGGCGT
TCAAGAAGATGAACAACGTGCTAATCGACGATCGGCGCATCCGGGTAGAC
TTCAGCCAGTCTGTTGCCAAAGAGTGGTAAGTCAAATGTCGTATCCTCTT
TTTCCCTTGTTGATGAAGGGCCGGTCGCAACGCTTGTTTATATGGTTCGC
GACCTGAGTATCGAAAGTGCAGCTGCGGATGAAGTAGCGTAACGTATCAT
GCCCCCGAGCCTCACCCTATACGTGGCCTTCGGTAAAAACGGCATGTTCC
CGGGCCTTTCCGTATTTTGTGCGTTGCACAGCTGTTGTAGTGTCAACCTC
ATTTTTGGTCGTGGCTGTTGCACTTGCGACACGGAAAGCACTCTAATCAT
GCCGTCCTTGGCCCACCAACGCCACTGCTGCCTCCCAGGTCGAAGTACAA
GGGCAGGGCCCAGGGGGGCCAGAAGCTGTCAAGCGGAAAGGGGGGCAAGC
CAGCACAGCAGCCACAGCAGAATAACACCCAACGGGACCACCACGCCTCG
GGTGGCGGGCGCGGCGCTGTGGATCAGCACCGCAAAAGCAAATGGGGGAA
CGCCCCTGTAAGCGGGGGGGTGGCGCATGCGGTCGGAAAACCGCCCTCGG
AGAACAGGCGGGGAGGAGATGCCACCTCGCACCGTCGGGACGGAGGGCGA
AACGACGAAGGGGAATCGGTCGCCTCTAGGCGGGGCAATAACGAGACAGT
CGGGGGTGGTGGACACGGTCGTCGACGGGAAGAGGACCGCCGGGGTGGCA
GAGGAGACAGGCGCGACCTTGGCGGCGACGGAAGACGCGGAGATGGCGGA
AGGAAGGATGACAGGGGCGACCGGAGGCATGGCGGTGACGACGGCGGAGT
GCGGCGCATTCGCGACGATGAAAGCGAGCGCAGAGGGAGGACGGACGAAG
CCTCGAGGGGAGGGGACGGGAGACACGGTGGGAGTCGGCACAGCAGAGCC
AGAGGTGGGGAGGGTCGAACGGCGGAAGACGAAGGACGCAATGGCGGCGG
CCGTAGCACGAACGACGATCGTGGTCACCGAGATGACCGCCACCGCGGCA
GTAGAGAACGCGGCCACGGGGGGGGCGACGATCGCTCTAAACGACACGAC
CGTAGCAGGAGTAGGAGTCGCGAAAAGAATCGTCGGAGGGGTGGGAGTCG
GGATAGGAGATCGAAGCGGTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10425:2..4023+

>mRNA_Ecto-sp13_S_contig10425.408.1 ID=mRNA_Ecto-sp13_S_contig10425.408.1|Name=mRNA_Ecto-sp13_S_contig10425.408.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1254bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10425:2..4023+ (Ectocarpus species13 EcNAP12_S_4_19m)
GATGAGTCCCCTCTGCGCGACCGGCCTGAGGAGGAAAAGGTGGCGCTGCG
CCTGGGAGCGCTGGACAAGGTGTCCTTGGAGGCCGACGAGAGGACGGAGC
TCGAAAGGGAGAAGCAGGCACGATGGCAAAAGACGGCGAGGTCTAACGCT
GTGGTGCTGGAGATGATCGGAGATCTCCCCGATGCGGACATGAAGCCGCC
GGAGAACGTTCTGTTCGTGTGCAAGCTCAACCCGGTCACCACTGACGACG
ACTTGGAGATTATCTTCACCAGGCACGAAATACATCCGATGTTCGGGACC
TGCCGGGCCGAGATCTGCCGGGATCACATCACTGGCGACAGCCTTAACTA
CGCCTTCGTGGAGTTCGAGGCTATCGAGTCATGCGAGGAGGCGTTCAAGA
AGATGAACAACGTGCTAATCGACGATCGGCGCATCCGGGTAGACTTCAGC
CAGTCTGTTGCCAAAGAGTGGTCGAAGTACAAGGGCAGGGCCCAGGGGGG
CCAGAAGCTGTCAAGCGGAAAGGGGGGCAAGCCAGCACAGCAGCCACAGC
AGAATAACACCCAACGGGACCACCACGCCTCGGGTGGCGGGCGCGGCGCT
GTGGATCAGCACCGCAAAAGCAAATGGGGGAACGCCCCTGTAAGCGGGGG
GGTGGCGCATGCGGTCGGAAAACCGCCCTCGGAGAACAGGCGGGGAGGAG
ATGCCACCTCGCACCGTCGGGACGGAGGGCGAAACGACGAAGGGGAATCG
GTCGCCTCTAGGCGGGGCAATAACGAGACAGTCGGGGGTGGTGGACACGG
TCGTCGACGGGAAGAGGACCGCCGGGGTGGCAGAGGAGACAGGCGCGACC
TTGGCGGCGACGGAAGACGCGGAGATGGCGGAAGGAAGGATGACAGGGGC
GACCGGAGGCATGGCGGTGACGACGGCGGAGTGCGGCGCATTCGCGACGA
TGAAAGCGAGCGCAGAGGGAGGACGGACGAAGCCTCGAGGGGAGGGGACG
GGAGACACGGTGGGAGTCGGCACAGCAGAGCCAGAGGTGGGGAGGGTCGA
ACGGCGGAAGACGAAGGACGCAATGGCGGCGGCCGTAGCACGAACGACGA
TCGTGGTCACCGAGATGACCGCCACCGCGGCAGTAGAGAACGCGGCCACG
GGGGGGGCGACGATCGCTCTAAACGACACGACCGTAGCAGGAGTAGGAGT
CGCGAAAAGAATCGTCGGAGGGGTGGGAGTCGGGATAGGAGATCGAAGCG
GTAG
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