prot_Ecto-sp13_S_contig10407.390.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10407.390.1
Unique Nameprot_Ecto-sp13_S_contig10407.390.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length93
Homology
BLAST of mRNA_Ecto-sp13_S_contig10407.390.1 vs. uniprot
Match: A0A6H5JCG3_9PHAE (Ribosomal_L18_c domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JCG3_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 8.060e-37
Identity = 69/90 (76.67%), Postives = 77/90 (85.56%), Query Frame = 0
Query:    4 HRDRIYGAHVAEYMEYLTEEDETKYKEHFASYIENELTFEDVEDMYKETHKAIREDPSPAVKTAYTPDKSFKNAVKLTYAQRKERVAAKK 93
            H ++ +  +  +  +Y   EDE KYKEHFASYIENELTFED+EDMYKETHKAIREDPSPA KTA+TPDKSFKNAVKLTYAQRKERVAAKK
Sbjct:  218 HNEKRFPGYDRDTKQYDVSEDEAKYKEHFASYIENELTFEDIEDMYKETHKAIREDPSPAPKTAFTPDKSFKNAVKLTYAQRKERVAAKK 307          
BLAST of mRNA_Ecto-sp13_S_contig10407.390.1 vs. uniprot
Match: A0A7S2S5W4_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S5W4_9STRA)

HSP 1 Score: 116 bits (290), Expect = 1.180e-29
Identity = 57/93 (61.29%), Postives = 73/93 (78.49%), Query Frame = 0
Query:    1 AELHRDRIYGAHVAEYMEYLTEEDETKYKEHFASYIENELTFEDVEDMYKETHKAIREDPSPAVKTAYTPDKSFKNAVKLTYAQRKERVAAKK 93
            AE+HR+RI+G HV EYMEYL EED TKYK+ FASYIE E+  + +E++Y+  H+A+REDPS + K A+TPDKSFK   KL+Y +RK RV AKK
Sbjct:  201 AEMHRERIFGGHVGEYMEYLEEEDNTKYKQQFASYIEEEIDADGLEELYEGVHEAVREDPSASEKVAFTPDKSFKRPSKLSYDERKARVQAKK 293          
BLAST of mRNA_Ecto-sp13_S_contig10407.390.1 vs. uniprot
Match: A0A7S0BVS7_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BVS7_9STRA)

HSP 1 Score: 115 bits (287), Expect = 5.000e-29
Identity = 56/93 (60.22%), Postives = 72/93 (77.42%), Query Frame = 0
Query:    1 AELHRDRIYGAHVAEYMEYLTEEDETKYKEHFASYIENELTFEDVEDMYKETHKAIREDPSPAVKTAYTPDKSFKNAVKLTYAQRKERVAAKK 93
            AE+H++RI+G HV EYMEYL EED TKY+EHF  YI+ ++  + +E++Y+  H+ IREDPS A K AY+PDK+FK   KLT AQRKERV AKK
Sbjct:  220 AEMHKERIFGGHVGEYMEYLEEEDNTKYQEHFKGYIDEDIEADGLEELYEGVHEKIREDPSAAEKKAYSPDKTFKRKAKLTLAQRKERVQAKK 312          
BLAST of mRNA_Ecto-sp13_S_contig10407.390.1 vs. uniprot
Match: A0A448Z3Q5_9STRA (Ribosomal_L18_c domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z3Q5_9STRA)

HSP 1 Score: 114 bits (285), Expect = 6.460e-29
Identity = 55/93 (59.14%), Postives = 73/93 (78.49%), Query Frame = 0
Query:    1 AELHRDRIYGAHVAEYMEYLTEEDETKYKEHFASYIENELTFEDVEDMYKETHKAIREDPSPAVKTAYTPDKSFKNAVKLTYAQRKERVAAKK 93
            +++HR+RI+G HV+EYMEYL EED  KYKEHFA YIE ++  + +E++Y+  H+AIREDPSP+ K  ++PDKSFK   KLTY +RK  VAAKK
Sbjct:  201 SDMHRERIFGGHVSEYMEYLEEEDNQKYKEHFAKYIEADVEGDSLEELYESVHEAIREDPSPSEKKDFSPDKSFKRPAKLTYDERKAAVAAKK 293          
BLAST of mRNA_Ecto-sp13_S_contig10407.390.1 vs. uniprot
Match: A0A7S1UYV0_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UYV0_9STRA)

HSP 1 Score: 109 bits (272), Expect = 6.620e-29
Identity = 53/93 (56.99%), Postives = 72/93 (77.42%), Query Frame = 0
Query:    1 AELHRDRIYGAHVAEYMEYLTEEDETKYKEHFASYIENELTFEDVEDMYKETHKAIREDPSPAVKTAYTPDKSFKNAVKLTYAQRKERVAAKK 93
            A++HR+RI+G HV EYMEYL EED  KY+EHFA+YIE+++  + +E++Y+  H+AIREDPSPA K  ++ DKS+K   KLT  +RK RV AKK
Sbjct:   19 ADMHRERIFGGHVGEYMEYLDEEDNQKYQEHFAAYIEDDIEPDGLEELYESVHEAIREDPSPAEKKDFSADKSYKRKAKLTLEERKARVEAKK 111          
BLAST of mRNA_Ecto-sp13_S_contig10407.390.1 vs. uniprot
Match: A0A7S2JWI3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JWI3_9STRA)

HSP 1 Score: 112 bits (280), Expect = 1.800e-28
Identity = 56/93 (60.22%), Postives = 71/93 (76.34%), Query Frame = 0
Query:    1 AELHRDRIYGAHVAEYMEYLTEEDETKYKEHFASYIENELTFEDVEDMYKETHKAIREDPSPAVKTAYTPDKSFKNAVKLTYAQRKERVAAKK 93
            AE+H++RI+G HV EYMEYL EED  KY+E F  YIEN++  + +E++Y+E H+ IREDPS A K A+ PDKS+K   KLT  QRKERVAAKK
Sbjct:  166 AEMHKERIFGGHVGEYMEYLEEEDNQKYQEQFKIYIENDVEADGLEELYEEVHEKIREDPSAAEKKAFEPDKSYKRKAKLTLEQRKERVAAKK 258          
BLAST of mRNA_Ecto-sp13_S_contig10407.390.1 vs. uniprot
Match: A0A7S4I3S1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I3S1_9STRA)

HSP 1 Score: 107 bits (267), Expect = 1.070e-27
Identity = 51/93 (54.84%), Postives = 71/93 (76.34%), Query Frame = 0
Query:    1 AELHRDRIYGAHVAEYMEYLTEEDETKYKEHFASYIENELTFEDVEDMYKETHKAIREDPSPAVKTAYTPDKSFKNAVKLTYAQRKERVAAKK 93
            A++HR+RI+G HV EYMEYL EED  KY+EHFA++I N++  + +E++Y+  H+ IREDPS + K A++PDKSFK   KL+Y +RK RV  KK
Sbjct:   59 ADMHRERIFGGHVGEYMEYLEEEDNQKYQEHFAAFIANDVEADGLEELYESVHEKIREDPSASEKKAFSPDKSFKRKAKLSYDERKARVQEKK 151          
BLAST of mRNA_Ecto-sp13_S_contig10407.390.1 vs. uniprot
Match: A0A1Z5J7J4_FISSO (Large subunit ribosomal protein L5e n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J7J4_FISSO)

HSP 1 Score: 108 bits (271), Expect = 7.420e-27
Identity = 51/93 (54.84%), Postives = 72/93 (77.42%), Query Frame = 0
Query:    1 AELHRDRIYGAHVAEYMEYLTEEDETKYKEHFASYIENELTFEDVEDMYKETHKAIREDPSPAVKTAYTPDKSFKNAVKLTYAQRKERVAAKK 93
            A++HR+RI+G HV+EYMEYL EED  KY+ HF S++EN++  + +E++Y+  H+ IREDPSP+ K  +TPDKS+K   KLT+ +RK RV AKK
Sbjct:  201 ADMHRERIFGGHVSEYMEYLEEEDNAKYQSHFKSFLENDIAGDGLEELYEGVHEKIREDPSPSEKKEFTPDKSYKRKSKLTHDERKARVQAKK 293          
BLAST of mRNA_Ecto-sp13_S_contig10407.390.1 vs. uniprot
Match: B5YLN7_THAPS (RL5, ribosomal protein 5, 60S large ribosomal subunit n=2 Tax=Ochrophyta TaxID=2696291 RepID=B5YLN7_THAPS)

HSP 1 Score: 108 bits (270), Expect = 1.060e-26
Identity = 52/93 (55.91%), Postives = 70/93 (75.27%), Query Frame = 0
Query:    1 AELHRDRIYGAHVAEYMEYLTEEDETKYKEHFASYIENELTFEDVEDMYKETHKAIREDPSPAVKTAYTPDKSFKNAVKLTYAQRKERVAAKK 93
            A++HR+RI+G HV EYMEYL EED TKY+  FA Y+ENE+  + +E++Y+  H+ IREDPSP+ K A++PDKSFK   KLT  +RK  V +KK
Sbjct:  201 ADMHRERIFGGHVGEYMEYLEEEDNTKYQAQFAGYLENEVEADGLEELYESVHEKIREDPSPSEKKAFSPDKSFKRKAKLTLEERKAAVQSKK 293          
BLAST of mRNA_Ecto-sp13_S_contig10407.390.1 vs. uniprot
Match: A0A7S2TBJ4_PROMC (Hypothetical protein n=1 Tax=Prorocentrum micans TaxID=2945 RepID=A0A7S2TBJ4_PROMC)

HSP 1 Score: 105 bits (261), Expect = 1.230e-26
Identity = 52/93 (55.91%), Postives = 70/93 (75.27%), Query Frame = 0
Query:    1 AELHRDRIYGAHVAEYMEYLTEEDETKYKEHFASYIENELTFEDVEDMYKETHKAIREDPSPAVKTAYTPDKSFKNAVKLTYAQRKERVAAKK 93
            A++HR+RI+G HV EYMEYL EED TK+KE FASY+  E+  +D+E++Y+  H+ IREDPS A K  ++PDKSFK   K++  +RK RV AKK
Sbjct:   69 ADMHRERIFGGHVGEYMEYLEEEDNTKFKEQFASYVAAEVEPDDLEELYEGVHEKIREDPSAADKEDFSPDKSFKRKAKISLQERKARVQAKK 161          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10407.390.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCG3_9PHAE8.060e-3776.67Ribosomal_L18_c domain-containing protein n=2 Tax=... [more]
A0A7S2S5W4_9STRA1.180e-2961.29Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S0BVS7_9STRA5.000e-2960.22Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A448Z3Q5_9STRA6.460e-2959.14Ribosomal_L18_c domain-containing protein n=1 Tax=... [more]
A0A7S1UYV0_9STRA6.620e-2956.99Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S2JWI3_9STRA1.800e-2860.22Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S4I3S1_9STRA1.070e-2754.84Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A1Z5J7J4_FISSO7.420e-2754.84Large subunit ribosomal protein L5e n=2 Tax=Fistul... [more]
B5YLN7_THAPS1.060e-2655.91RL5, ribosomal protein 5, 60S large ribosomal subu... [more]
A0A7S2TBJ4_PROMC1.230e-2655.91Hypothetical protein n=1 Tax=Prorocentrum micans T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025607Ribosomal protein L5 eukaryotic/L18 archaeal, C-terminalPFAMPF14204Ribosomal_L18_ccoord: 1..92
e-value: 1.4E-31
score: 109.3
NoneNo IPR availableGENE3D3.30.420.550coord: 1..93
e-value: 1.5E-27
score: 98.7
NoneNo IPR availablePANTHERPTHR23410:SF1260S RIBOSOMAL PROTEIN L5coord: 1..93
NoneNo IPR availableSUPERFAMILY53137Translational machinery componentscoord: 5..61
IPR005485Ribosomal protein L5 eukaryotic/L18 archaealPANTHERPTHR23410RIBOSOMAL PROTEIN L5-RELATEDcoord: 1..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10407contigEcto-sp13_S_contig10407:4907..5754 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10407.390.1mRNA_Ecto-sp13_S_contig10407.390.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10407 4907..5754 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10407.390.1 ID=prot_Ecto-sp13_S_contig10407.390.1|Name=mRNA_Ecto-sp13_S_contig10407.390.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=93bp
AELHRDRIYGAHVAEYMEYLTEEDETKYKEHFASYIENELTFEDVEDMYK
ETHKAIREDPSPAVKTAYTPDKSFKNAVKLTYAQRKERVAAKK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025607Rbsml_L5e/L18P_C
IPR005485Rbsml_L5_euk/L18_arc